Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is pip [H]
Identifier: 238024714
GI number: 238024714
Start: 1733321
End: 1734256
Strand: Direct
Name: pip [H]
Synonym: bglu_2g13510
Alternate gene names: 238024714
Gene position: 1733321-1734256 (Clockwise)
Preceding gene: 238024712
Following gene: 238024715
Centisome position: 61.31
GC content: 68.91
Gene sequence:
>936_bases ATGTATCCACCTCTCGAACCCTACGCCCACGGCCATCTCGATACCGGCGACGGCCACCGCCTCTACTGGGAGCGCTGCGG CACGCCCGGCGCGAAGCCGGCGGTGTTCCTGCACGGCGGCCCCGGGGCGGGTTGCGCGCCGCGCCATCGGCAGTTGTTCG ACCCGGCGCGCTACGACGTCCTGCTGTTCGACCAGCGCGGCTGCGGTAGATCAACGCCGCACGCGAGCCTGCGGAACAAT ACCACCTGGCATCTGGTCGATGATATCGAGCGGCTGCGCAACATGGTGGGAGCCGAGCGCTGGCTCGTGTTCGGCGGATC GTGGGGCAGCGCCCTCGCGCTCGCCTATGCCGAAACGCATCCGGCGCGCGTCAGCGAGCTGGTCGTGCGCGGTATCTTCA CGCTACGGCATGCCGAGCTGCTCTGGTATTACCAGGAAGGCGCCTCGTGGCTGTTTCCGGACCTGTGGGAGTCGTTTCTC GCGCCGATCCCGCAAGCCGAGCGCGGCGACCTGATCAGCGCCTACCACCGCCGCCTGACGGGCGACGACGAGGCGGCGAA ACTCGAGGCCGCGATCGCCTGGAGCGTTTGGGAAAGCCGCACCATCACCCTGCTGCCGAACCCGCAGCTGGCCGCCCAGT ACGGCGAGGCCCACTACGCGCTGGCGTTCGCGCGGATCGAAAACCACTATTTCGTCAATCGTGGTTTCATCGAGGAAGGA CAGCTGCTGCGCGATGCCCACCGGCTCGCGTCGATCCCCGGCGTGATCGTGCAGGGCCGCTATGACGTCGCGACGCCGGC CAGGAGCGCATGGGATCTCGCCAAGGCCTGGCCGGGCGCGAGCCTCGAAATCGTCGCCGATGCCGGCCACGCGTTCGACG AGCCCGGCATCCTGCGCGCGTTGCTGGCGGCCACGGACCGCTTCGCGGCGACGTGA
Upstream 100 bases:
>100_bases CGCGCAGCGATGATTCCGCCGCGGCACCCGGGCGGCCTGCCGGCACGGCAGCCGCGTCGCCCTCGTCCTCGTAACCGGCC CTCCCTGCGGAGTTCGCAGC
Downstream 100 bases:
>100_bases GCGAGCCCGGCGCGGCGCGCCCGCCAAGCGCCGCGGCAGCTGCGCCGGCCCCGGCCTGGCGCCGGGCCGCCGGCGATTTT TCAACAACTGTCAGGCAACA
Product: Proline iminopeptidase
Products: NA
Alternate protein names: PIP; Prolyl aminopeptidase; PAP [H]
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MYPPLEPYAHGHLDTGDGHRLYWERCGTPGAKPAVFLHGGPGAGCAPRHRQLFDPARYDVLLFDQRGCGRSTPHASLRNN TTWHLVDDIERLRNMVGAERWLVFGGSWGSALALAYAETHPARVSELVVRGIFTLRHAELLWYYQEGASWLFPDLWESFL APIPQAERGDLISAYHRRLTGDDEAAKLEAAIAWSVWESRTITLLPNPQLAAQYGEAHYALAFARIENHYFVNRGFIEEG QLLRDAHRLASIPGVIVQGRYDVATPARSAWDLAKAWPGASLEIVADAGHAFDEPGILRALLAATDRFAAT
Sequences:
>Translated_311_residues MYPPLEPYAHGHLDTGDGHRLYWERCGTPGAKPAVFLHGGPGAGCAPRHRQLFDPARYDVLLFDQRGCGRSTPHASLRNN TTWHLVDDIERLRNMVGAERWLVFGGSWGSALALAYAETHPARVSELVVRGIFTLRHAELLWYYQEGASWLFPDLWESFL APIPQAERGDLISAYHRRLTGDDEAAKLEAAIAWSVWESRTITLLPNPQLAAQYGEAHYALAFARIENHYFVNRGFIEEG QLLRDAHRLASIPGVIVQGRYDVATPARSAWDLAKAWPGASLEIVADAGHAFDEPGILRALLAATDRFAAT >Mature_311_residues MYPPLEPYAHGHLDTGDGHRLYWERCGTPGAKPAVFLHGGPGAGCAPRHRQLFDPARYDVLLFDQRGCGRSTPHASLRNN TTWHLVDDIERLRNMVGAERWLVFGGSWGSALALAYAETHPARVSELVVRGIFTLRHAELLWYYQEGASWLFPDLWESFL APIPQAERGDLISAYHRRLTGDDEAAKLEAAIAWSVWESRTITLLPNPQLAAQYGEAHYALAFARIENHYFVNRGFIEEG QLLRDAHRLASIPGVIVQGRYDVATPARSAWDLAKAWPGASLEIVADAGHAFDEPGILRALLAATDRFAAT
Specific function: Specifically catalyzes the removal of N-terminal proline residues from peptides [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR005944 - InterPro: IPR002410 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.4.11.5 [H]
Molecular weight: Translated: 34584; Mature: 34584
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPPLEPYAHGHLDTGDGHRLYWERCGTPGAKPAVFLHGGPGAGCAPRHRQLFDPARYDV CCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEE LLFDQRGCGRSTPHASLRNNTTWHLVDDIERLRNMVGAERWLVFGGSWGSALALAYAETH EEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEEECCCCHHEEEEECCCC PARVSELVVRGIFTLRHAELLWYYQEGASWLFPDLWESFLAPIPQAERGDLISAYHRRLT HHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCC GDDEAAKLEAAIAWSVWESRTITLLPNPQLAAQYGEAHYALAFARIENHYFVNRGFIEEG CCCHHHHHHHHEEEEECCCCEEEEECCCHHHHHHCCHHHEEEEEECCCEEEEECCCCCCC QLLRDAHRLASIPGVIVQGRYDVATPARSAWDLAKAWPGASLEIVADAGHAFDEPGILRA HHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHH LLAATDRFAAT HHHHHHHHCCC >Mature Secondary Structure MYPPLEPYAHGHLDTGDGHRLYWERCGTPGAKPAVFLHGGPGAGCAPRHRQLFDPARYDV CCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEE LLFDQRGCGRSTPHASLRNNTTWHLVDDIERLRNMVGAERWLVFGGSWGSALALAYAETH EEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEEECCCCHHEEEEECCCC PARVSELVVRGIFTLRHAELLWYYQEGASWLFPDLWESFLAPIPQAERGDLISAYHRRLT HHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCC GDDEAAKLEAAIAWSVWESRTITLLPNPQLAAQYGEAHYALAFARIENHYFVNRGFIEEG CCCHHHHHHHHEEEEECCCCEEEEECCCHHHHHHCCHHHEEEEEECCCEEEEECCCCCCC QLLRDAHRLASIPGVIVQGRYDVATPARSAWDLAKAWPGASLEIVADAGHAFDEPGILRA HHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHH LLAATDRFAAT HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9348090; 11011150; 10467172 [H]