Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is yeeA [H]
Identifier: 238024712
GI number: 238024712
Start: 1730945
End: 1732015
Strand: Direct
Name: yeeA [H]
Synonym: bglu_2g13490
Alternate gene names: 238024712
Gene position: 1730945-1732015 (Clockwise)
Preceding gene: 238024711
Following gene: 238024714
Centisome position: 61.22
GC content: 68.16
Gene sequence:
>1071_bases ATGACCGCTGCCCCGTCGCCCCGCCTGCCCGCCGCGCTGCGCGCGCTGTTTCGCCCGCTGCTCGACCCCTATCGCCGCTA CCGGCATGCGAAGCTGATCCATGCCGCGCGCGTCGCGCTCAGCGTGCTGGCGTCGATCGCACTGTCGACCGGGCTCGACA TCCCGCACGGCGAATGGTCGTCGATCACGGTGCTGATCGTGATCGGCGGGCTCCAGCATCACGGCAACATCCGCAAGAAG GCCGCCGAACGCGCGCTCGGCACCACCATCGGCGCGCTCGCCGGGCTCGCGCTGATCGTGCTGCAATCCACGCTGCACGT ATCGATCGTCACCTATCTGCTGATGAGCGTGCTGTGCGGGATCTGCGCCTATCACGCGATCGGCAAGGCCGGCTACATCG CGCTGCTCTCGGCAATCACGATCCTGATCGTGGCCGGCCACGGCGACAACGAGATCGTCGACGGGCTCTGGCGCGCGGTC AACGTGCTAGTCGGCATCGGCATCGCGCTGGCGTTCTCGTTCGCGCTGCCGCTCTACGCCACCTATTCGTGGCGCTACAA GCTCGCCGACGCGCTGCGCGCCTGCGCCATGGTCCACGCACGCATCGTCAGCGACCAGACCGTCAGCGACACCGCGCACC TGAAGGAGATGGCCGCGCTGAACGCGCTGCTGGTGCAGATGCGCTCGCTGATGCCGTGGGTGTCGAAGGAAACCGACATC ACGATGGCGCAGCTCGACGCGATCCAGCGCTCGCTGCGGCTCGTGATCAGTTCGCTCGAAATGCTCGCGAGCGTGCAGCC GGCCGACGGCGACGTGACGGGCCGGCGCTATGTGCAGACCGCGCTGCGCGGCCTGAACCGCCGCATCCACGGGCTGCTGA TCGGGCCGAGCCGCGCGCTGAAGTTCGGCACGCTCGCGCGGCTGCAGCCGCTGCCGGCGGTGAGCGGGCCGCATCATGCC GAGGTGCCGGCACAACTGTCCGGCTACGTGTCGATCAACGAGAAGATCGAGCGCGAATGCGATCTGATGCGGCAGCGGCT GCAGGACGTGTCGCCGCAATGGAACATCTAG
Upstream 100 bases:
>100_bases CGATCCATTAGAATCGCGGAACGTATCGGCCGCGCCGCTTGGGCGGCCGGCCCGCGCCGAAGCGCCGCCGCGCGAGCGCT CCGTTCTGCCACTGCCCGCC
Downstream 100 bases:
>100_bases CGGCGACGCGTGGCTTGCCCCGCGCGACAGGCAGCGGCCAAACCCGGGCCGCTGGCCCGAGCGCGCGGCGCGGCGGCGAA CGCGGCCCGCGCTTCGGTTC
Product: membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MTAAPSPRLPAALRALFRPLLDPYRRYRHAKLIHAARVALSVLASIALSTGLDIPHGEWSSITVLIVIGGLQHHGNIRKK AAERALGTTIGALAGLALIVLQSTLHVSIVTYLLMSVLCGICAYHAIGKAGYIALLSAITILIVAGHGDNEIVDGLWRAV NVLVGIGIALAFSFALPLYATYSWRYKLADALRACAMVHARIVSDQTVSDTAHLKEMAALNALLVQMRSLMPWVSKETDI TMAQLDAIQRSLRLVISSLEMLASVQPADGDVTGRRYVQTALRGLNRRIHGLLIGPSRALKFGTLARLQPLPAVSGPHHA EVPAQLSGYVSINEKIERECDLMRQRLQDVSPQWNI
Sequences:
>Translated_356_residues MTAAPSPRLPAALRALFRPLLDPYRRYRHAKLIHAARVALSVLASIALSTGLDIPHGEWSSITVLIVIGGLQHHGNIRKK AAERALGTTIGALAGLALIVLQSTLHVSIVTYLLMSVLCGICAYHAIGKAGYIALLSAITILIVAGHGDNEIVDGLWRAV NVLVGIGIALAFSFALPLYATYSWRYKLADALRACAMVHARIVSDQTVSDTAHLKEMAALNALLVQMRSLMPWVSKETDI TMAQLDAIQRSLRLVISSLEMLASVQPADGDVTGRRYVQTALRGLNRRIHGLLIGPSRALKFGTLARLQPLPAVSGPHHA EVPAQLSGYVSINEKIERECDLMRQRLQDVSPQWNI >Mature_355_residues TAAPSPRLPAALRALFRPLLDPYRRYRHAKLIHAARVALSVLASIALSTGLDIPHGEWSSITVLIVIGGLQHHGNIRKKA AERALGTTIGALAGLALIVLQSTLHVSIVTYLLMSVLCGICAYHAIGKAGYIALLSAITILIVAGHGDNEIVDGLWRAVN VLVGIGIALAFSFALPLYATYSWRYKLADALRACAMVHARIVSDQTVSDTAHLKEMAALNALLVQMRSLMPWVSKETDIT MAQLDAIQRSLRLVISSLEMLASVQPADGDVTGRRYVQTALRGLNRRIHGLLIGPSRALKFGTLARLQPLPAVSGPHHAE VPAQLSGYVSINEKIERECDLMRQRLQDVSPQWNI
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788318, Length=247, Percent_Identity=30.7692307692308, Blast_Score=113, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 38604; Mature: 38473
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAPSPRLPAALRALFRPLLDPYRRYRHAKLIHAARVALSVLASIALSTGLDIPHGEWS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SITVLIVIGGLQHHGNIRKKAAERALGTTIGALAGLALIVLQSTLHVSIVTYLLMSVLCG CEEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ICAYHAIGKAGYIALLSAITILIVAGHGDNEIVDGLWRAVNVLVGIGIALAFSFALPLYA HHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TYSWRYKLADALRACAMVHARIVSDQTVSDTAHLKEMAALNALLVQMRSLMPWVSKETDI HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH TMAQLDAIQRSLRLVISSLEMLASVQPADGDVTGRRYVQTALRGLNRRIHGLLIGPSRAL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCHHHH KFGTLARLQPLPAVSGPHHAEVPAQLSGYVSINEKIERECDLMRQRLQDVSPQWNI HHHHHHHCCCCCCCCCCCCCCCCHHHHCCEEHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TAAPSPRLPAALRALFRPLLDPYRRYRHAKLIHAARVALSVLASIALSTGLDIPHGEWS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SITVLIVIGGLQHHGNIRKKAAERALGTTIGALAGLALIVLQSTLHVSIVTYLLMSVLCG CEEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ICAYHAIGKAGYIALLSAITILIVAGHGDNEIVDGLWRAVNVLVGIGIALAFSFALPLYA HHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TYSWRYKLADALRACAMVHARIVSDQTVSDTAHLKEMAALNALLVQMRSLMPWVSKETDI HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH TMAQLDAIQRSLRLVISSLEMLASVQPADGDVTGRRYVQTALRGLNRRIHGLLIGPSRAL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCHHHH KFGTLARLQPLPAVSGPHHAEVPAQLSGYVSINEKIERECDLMRQRLQDVSPQWNI HHHHHHHCCCCCCCCCCCCCCCCHHHHCCEEHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]