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The map label for this gene is ydhJ [C]

Identifier: 238024646

GI number: 238024646

Start: 1623099

End: 1623932

Strand: Direct

Name: ydhJ [C]

Synonym: bglu_2g12610

Alternate gene names: 238024646

Gene position: 1623099-1623932 (Clockwise)

Preceding gene: 238024645

Following gene: 238024647

Centisome position: 57.41

GC content: 71.82

Gene sequence:

>834_bases
ATGACGCAGTACATGACCTACCGGGCAGCGGCCGCAGTCGCGCTGCTCGTCGCAGCACAGTTCGCGCGGGCCGCCACGGC
GGCGCCCGCCACGCCTGCCGCGCGGCCGGCGCCCGCCCCGGCGCCGGTGGCCGCCCCCGCGGCGCCGGCCGCCGCGCCGG
CGGGCCCGGACGGCAACGATTCGCGGATTCGCATCCAGCTCGTCTCGCGCGACCAGGTGGACGTGTCGAGCGAGATCGCG
GCGAAGATCGCGTCGCTGCCGTTTCGCGACGGCGACACGTTCCGCGCCGGACAGACCCTCGTCACGCTCGACTGCTCGCT
GTTCAGCGCCCAGCTGCGCAAGGCCCAGGCCGACGCGGAAGGCGCGCGCGAGCTGCTCGACACGAACCGCAAGCTGCAGG
CGCTGCATTCGATCGGCGAGCTGGAAGTGCAGCAGGCCCAGGCCAAGCAGAAGGCCAGCGCCGCCGACGTCGCCTACATG
CAGGCCACCGTGCGCAAGTGCGCGATCACCGCACCGTTCGACGGCCGCGTCTCCAAGCGCAGCGCCTCGCCCCAGCAGTT
CGCGGAGCCCGGCAAGCCGCTTTTGACCATCATCGACACCAGTCATCTCGAACTGAAGATGATCGTGCCGTCGAAGTGGC
TCGCCTGGCTCAAGCCCGGCCATCCGCTCAGCGTGCAGGTGGACGAGGTCGGCAAGACCTATCCGGCCAAGGTCGCGCGG
ATCGGCGCGCGCGTCGATCCGGTCACGCAGACCGTGGACGTGACGGCAGCACTGAACGGCGGTGCCCCGGAGCTGCTGCC
GGGCATGAGCGGCTGGGCGACCTTCGCGCGGTGA

Upstream 100 bases:

>100_bases
GGGACGACATTGCCCGGCACGGCGTCCAGGCCGCCGCCCTCGCGCAACCGGGTCCGACGATCGCCGCGGCAGCGGCATTG
CCGGCGGGAGTCTCGCAGAA

Downstream 100 bases:

>100_bases
TGCGATGACGCAAACGCAACGGGCCGACGACGCGGCGCAGCAGGTCCGCATCGACGGCCAGCAGCTCGCGGTGCTCTGGC
AGCTCTCGACGCGTGCGCGG

Product: HlyD family secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MTQYMTYRAAAAVALLVAAQFARAATAAPATPAARPAPAPAPVAAPAAPAAAPAGPDGNDSRIRIQLVSRDQVDVSSEIA
AKIASLPFRDGDTFRAGQTLVTLDCSLFSAQLRKAQADAEGARELLDTNRKLQALHSIGELEVQQAQAKQKASAADVAYM
QATVRKCAITAPFDGRVSKRSASPQQFAEPGKPLLTIIDTSHLELKMIVPSKWLAWLKPGHPLSVQVDEVGKTYPAKVAR
IGARVDPVTQTVDVTAALNGGAPELLPGMSGWATFAR

Sequences:

>Translated_277_residues
MTQYMTYRAAAAVALLVAAQFARAATAAPATPAARPAPAPAPVAAPAAPAAAPAGPDGNDSRIRIQLVSRDQVDVSSEIA
AKIASLPFRDGDTFRAGQTLVTLDCSLFSAQLRKAQADAEGARELLDTNRKLQALHSIGELEVQQAQAKQKASAADVAYM
QATVRKCAITAPFDGRVSKRSASPQQFAEPGKPLLTIIDTSHLELKMIVPSKWLAWLKPGHPLSVQVDEVGKTYPAKVAR
IGARVDPVTQTVDVTAALNGGAPELLPGMSGWATFAR
>Mature_276_residues
TQYMTYRAAAAVALLVAAQFARAATAAPATPAARPAPAPAPVAAPAAPAAAPAGPDGNDSRIRIQLVSRDQVDVSSEIAA
KIASLPFRDGDTFRAGQTLVTLDCSLFSAQLRKAQADAEGARELLDTNRKLQALHSIGELEVQQAQAKQKASAADVAYMQ
ATVRKCAITAPFDGRVSKRSASPQQFAEPGKPLLTIIDTSHLELKMIVPSKWLAWLKPGHPLSVQVDEVGKTYPAKVARI
GARVDPVTQTVDVTAALNGGAPELLPGMSGWATFAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=201, Percent_Identity=26.865671641791, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 29065; Mature: 28934

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQYMTYRAAAAVALLVAAQFARAATAAPATPAARPAPAPAPVAAPAAPAAAPAGPDGND
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SRIRIQLVSRDQVDVSSEIAAKIASLPFRDGDTFRAGQTLVTLDCSLFSAQLRKAQADAE
CEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCHH
GARELLDTNRKLQALHSIGELEVQQAQAKQKASAADVAYMQATVRKCAITAPFDGRVSKR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC
SASPQQFAEPGKPLLTIIDTSHLELKMIVPSKWLAWLKPGHPLSVQVDEVGKTYPAKVAR
CCCHHHHHCCCCCEEEEEECCCEEEEEECCCHHHHHCCCCCCCEEEHHCCCCCCHHHHHH
IGARVDPVTQTVDVTAALNGGAPELLPGMSGWATFAR
HCCCCCCCHHEEEEEEEECCCCHHHCCCCCCHHHCCC
>Mature Secondary Structure 
TQYMTYRAAAAVALLVAAQFARAATAAPATPAARPAPAPAPVAAPAAPAAAPAGPDGND
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SRIRIQLVSRDQVDVSSEIAAKIASLPFRDGDTFRAGQTLVTLDCSLFSAQLRKAQADAE
CEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCHH
GARELLDTNRKLQALHSIGELEVQQAQAKQKASAADVAYMQATVRKCAITAPFDGRVSKR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC
SASPQQFAEPGKPLLTIIDTSHLELKMIVPSKWLAWLKPGHPLSVQVDEVGKTYPAKVAR
CCCHHHHHCCCCCEEEEEECCCEEEEEECCCHHHHHCCCCCCCEEEHHCCCCCCHHHHHH
IGARVDPVTQTVDVTAALNGGAPELLPGMSGWATFAR
HCCCCCCCHHEEEEEEEECCCCHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]