Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024636
Identifier: 238024636
GI number: 238024636
Start: 1603732
End: 1604121
Strand: Reverse
Name: 238024636
Synonym: bglu_2g12510
Alternate gene names: NA
Gene position: 1604121-1603732 (Counterclockwise)
Preceding gene: 238024637
Following gene: 238024635
Centisome position: 56.74
GC content: 72.82
Gene sequence:
>390_bases ATGAGCATCCGTGTGGTTCGGCTCGGCGCGCCGCGCGCGCCCGACGAGGGCGTGCGCATCGGCACGGTGCGGCGGCCGCC GCGCGGCGTGCCGAAGGCCGAATTCGCGACGCGCGACTACTACGACGTCTGGCTGCCGGTGCTCGCGCCGAGCGAGGCGC TGGTCAAGGCCATCCACGCCGTCAGCACCGACGCCCAATGGCGCGCCTGCGAGCGCAGCTTTCGCGCCGAGATGGCCAAG GGCGACGCCGGCAAGGTGCTCGACCTGCTCGCCGCGCTGTCGCACACGAACGACTTCTCGGTCGGCTGCTATTGCGAGAA CGAGGCCCGCTGCCATCGCAGCGTGCTGCGGCGGCTGCTCGAATCGCGCGGCGCGGCGGTGCTGCCCTGA
Upstream 100 bases:
>100_bases GGGCGCGACGGCCTCTTTTCACGGGGCTGCTCGTGCTTGCTTTCACGCCGTTTTCCATGCCGGCGCCGCCGCGCGCCCGG CAGTCCGTCTGGAGGTCAGG
Downstream 100 bases:
>100_bases GCCGGGCCGCACCGCCTGGTCGAAACCCGGGGCGGTACGGAGTTTGCGAGCCGCGCGGTGAGAGGGCCATAAGACGGCCA CAAGACGGCAGCAAGAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSIRVVRLGAPRAPDEGVRIGTVRRPPRGVPKAEFATRDYYDVWLPVLAPSEALVKAIHAVSTDAQWRACERSFRAEMAK GDAGKVLDLLAALSHTNDFSVGCYCENEARCHRSVLRRLLESRGAAVLP
Sequences:
>Translated_129_residues MSIRVVRLGAPRAPDEGVRIGTVRRPPRGVPKAEFATRDYYDVWLPVLAPSEALVKAIHAVSTDAQWRACERSFRAEMAK GDAGKVLDLLAALSHTNDFSVGCYCENEARCHRSVLRRLLESRGAAVLP >Mature_128_residues SIRVVRLGAPRAPDEGVRIGTVRRPPRGVPKAEFATRDYYDVWLPVLAPSEALVKAIHAVSTDAQWRACERSFRAEMAKG DAGKVLDLLAALSHTNDFSVGCYCENEARCHRSVLRRLLESRGAAVLP
Specific function: Unknown
COG id: COG3189
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14215; Mature: 14083
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRVVRLGAPRAPDEGVRIGTVRRPPRGVPKAEFATRDYYDVWLPVLAPSEALVKAIHA CCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCHHCCCCHHHHHHHHCCCHHHHHHHHHH VSTDAQWRACERSFRAEMAKGDAGKVLDLLAALSHTNDFSVGCYCENEARCHRSVLRRLL HCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHH ESRGAAVLP HHCCCCCCC >Mature Secondary Structure SIRVVRLGAPRAPDEGVRIGTVRRPPRGVPKAEFATRDYYDVWLPVLAPSEALVKAIHA CEEEEECCCCCCCCCCCEECCCCCCCCCCCCCHHCCCCHHHHHHHHCCCHHHHHHHHHH VSTDAQWRACERSFRAEMAKGDAGKVLDLLAALSHTNDFSVGCYCENEARCHRSVLRRLL HCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHH ESRGAAVLP HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA