Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024603
Identifier: 238024603
GI number: 238024603
Start: 1553475
End: 1554587
Strand: Reverse
Name: 238024603
Synonym: bglu_2g12180
Alternate gene names: NA
Gene position: 1554587-1553475 (Counterclockwise)
Preceding gene: 238024604
Following gene: 238024600
Centisome position: 54.98
GC content: 69.45
Gene sequence:
>1113_bases ATGAAGACCTTTCATTGCGGTAACTGCACGCAGCTGGTGTTCTTCGAGAACGTCCGCTGCGAGCGCTGCGAGGCGCCGCT CGGCTACCTGCCCGAGATCGGCGAGGTCGGCGCCTTCGAGCCCGACGCGTCGGGCAACTGGCGCAGCCTGCATCCCGCCG CGCACGGGCGGCGCTACCGGCCGTGCCACAACTACGCGGTGGAGAACGTCTGCAACTGGATGATTCCGGCCGAGTCCGAC GCCACCTATTGCGAAGCCTGCGCGCTGACCGAGACGATTCCCGATCTGTCGAATCCCGACAACCGCCCGCTCTGGTATCG CACCGAGGTGGCCAAGCGGCGGCTGCTCTACACGCTCGCCATGCTGGGGCTGCCGATCGAGCCGCGCAGCGTGTTTCCCG AGCGCGGCATGAGCTTCGCGTTCAAGGCCGCCACCGAGACCGAGCCGGTGCTGACGGGCCACGCCAACGGGCTCGTCACG CTGAACCTCGCCGAGGCCGACGACGCCGAGCGCGAGCGCGTGCGGGCCGCGATGCGCGAGCCGTACCGCACGCTGCTCGG GCATTTCCGGCACGAGATCGGCCATTACTATTTCGATCGCCTGATCGCGGGCACGCCGTGGCTCGAGCCGTTTCGCGAGC GCTTCGGCGACGAGCGCGCCGACTATCAGGCCGCGCTCGACGCGCACTATCAGCATGGCGCTCCGGCGGGCTGGCATGAC GCCTACGTCAGCGAGTACGCCACCATGCACCCGTGGGAGGACTGGGCCGAGACCTGGGCGCATTACCTGCACATCGTCGA TACGCTCGACACCGCCAATGCCTGCGGCCTCGTGCTCGATCCCGACGACGAGAGCCTGCCGCGCCTGGACGACCAGACCT CCGTGGACGAGGCCTCGTTCGGCAACCTGATGCGGCGCTGGTTTCCGCTCACCTACGCGTTGAACAGCCTGAACCGCAGC ATGGGCGTGGCCGACGCCTATCCGTTCGCGCTCTCGCCGGCGGTGGTGGCGAAGCTGCGGTTCGTGCATCGCGTGGTGAC GGCCACGCGCGAGGCGGCGCCCGCCGACGGCGCCGGCGCGCGGGCCGTGGGCAGCGAGGGCGAGGCGGGTTGA
Upstream 100 bases:
>100_bases CTGCCGGCGCGTGGCCGCGCAGCACGGCCAGGCGTGAGGCGGGCGCGGCGCCGGGAAGGCCGGCACGCGACCACGGGAAC CGGGCGGGAGCGATCGGACC
Downstream 100 bases:
>100_bases GCGCCTGAGCGCTGGGTGGGCGCGCCGCCGCAGCGGCGCGCCGCGACCTCACGATTCGTCGGCGCTGCCGGCGGTGCCGC GCGGGCGGCGCGCACGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MKTFHCGNCTQLVFFENVRCERCEAPLGYLPEIGEVGAFEPDASGNWRSLHPAAHGRRYRPCHNYAVENVCNWMIPAESD ATYCEACALTETIPDLSNPDNRPLWYRTEVAKRRLLYTLAMLGLPIEPRSVFPERGMSFAFKAATETEPVLTGHANGLVT LNLAEADDAERERVRAAMREPYRTLLGHFRHEIGHYYFDRLIAGTPWLEPFRERFGDERADYQAALDAHYQHGAPAGWHD AYVSEYATMHPWEDWAETWAHYLHIVDTLDTANACGLVLDPDDESLPRLDDQTSVDEASFGNLMRRWFPLTYALNSLNRS MGVADAYPFALSPAVVAKLRFVHRVVTATREAAPADGAGARAVGSEGEAG
Sequences:
>Translated_370_residues MKTFHCGNCTQLVFFENVRCERCEAPLGYLPEIGEVGAFEPDASGNWRSLHPAAHGRRYRPCHNYAVENVCNWMIPAESD ATYCEACALTETIPDLSNPDNRPLWYRTEVAKRRLLYTLAMLGLPIEPRSVFPERGMSFAFKAATETEPVLTGHANGLVT LNLAEADDAERERVRAAMREPYRTLLGHFRHEIGHYYFDRLIAGTPWLEPFRERFGDERADYQAALDAHYQHGAPAGWHD AYVSEYATMHPWEDWAETWAHYLHIVDTLDTANACGLVLDPDDESLPRLDDQTSVDEASFGNLMRRWFPLTYALNSLNRS MGVADAYPFALSPAVVAKLRFVHRVVTATREAAPADGAGARAVGSEGEAG >Mature_370_residues MKTFHCGNCTQLVFFENVRCERCEAPLGYLPEIGEVGAFEPDASGNWRSLHPAAHGRRYRPCHNYAVENVCNWMIPAESD ATYCEACALTETIPDLSNPDNRPLWYRTEVAKRRLLYTLAMLGLPIEPRSVFPERGMSFAFKAATETEPVLTGHANGLVT LNLAEADDAERERVRAAMREPYRTLLGHFRHEIGHYYFDRLIAGTPWLEPFRERFGDERADYQAALDAHYQHGAPAGWHD AYVSEYATMHPWEDWAETWAHYLHIVDTLDTANACGLVLDPDDESLPRLDDQTSVDEASFGNLMRRWFPLTYALNSLNRS MGVADAYPFALSPAVVAKLRFVHRVVTATREAAPADGAGARAVGSEGEAG
Specific function: Unknown
COG id: COG4307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011201 [H]
Pfam domain/function: PF10005 DUF2248 [H]
EC number: NA
Molecular weight: Translated: 41524; Mature: 41524
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFHCGNCTQLVFFENVRCERCEAPLGYLPEIGEVGAFEPDASGNWRSLHPAAHGRRYR CCCEECCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC PCHNYAVENVCNWMIPAESDATYCEACALTETIPDLSNPDNRPLWYRTEVAKRRLLYTLA CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHH MLGLPIEPRSVFPERGMSFAFKAATETEPVLTGHANGLVTLNLAEADDAERERVRAAMRE HHCCCCCCHHCCCCCCCCEEEECCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHH PYRTLLGHFRHEIGHYYFDRLIAGTPWLEPFRERFGDERADYQAALDAHYQHGAPAGWHD HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHH AYVSEYATMHPWEDWAETWAHYLHIVDTLDTANACGLVLDPDDESLPRLDDQTSVDEASF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHH GNLMRRWFPLTYALNSLNRSMGVADAYPFALSPAVVAKLRFVHRVVTATREAAPADGAGA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC RAVGSEGEAG CCCCCCCCCC >Mature Secondary Structure MKTFHCGNCTQLVFFENVRCERCEAPLGYLPEIGEVGAFEPDASGNWRSLHPAAHGRRYR CCCEECCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC PCHNYAVENVCNWMIPAESDATYCEACALTETIPDLSNPDNRPLWYRTEVAKRRLLYTLA CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHH MLGLPIEPRSVFPERGMSFAFKAATETEPVLTGHANGLVTLNLAEADDAERERVRAAMRE HHCCCCCCHHCCCCCCCCEEEECCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHH PYRTLLGHFRHEIGHYYFDRLIAGTPWLEPFRERFGDERADYQAALDAHYQHGAPAGWHD HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHH AYVSEYATMHPWEDWAETWAHYLHIVDTLDTANACGLVLDPDDESLPRLDDQTSVDEASF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHH GNLMRRWFPLTYALNSLNRSMGVADAYPFALSPAVVAKLRFVHRVVTATREAAPADGAGA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC RAVGSEGEAG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]