Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024602
Identifier: 238024602
GI number: 238024602
Start: 1551810
End: 1553426
Strand: Direct
Name: 238024602
Synonym: bglu_2g12170
Alternate gene names: NA
Gene position: 1551810-1553426 (Clockwise)
Preceding gene: 238024601
Following gene: 238024605
Centisome position: 54.89
GC content: 71.68
Gene sequence:
>1617_bases ATGGCCTTGCCTCAGGACAGCGTCAACATGGCGCTTTTTTGCGACTTCGAAAACATCGCGCTCGGCGTGCGCGATACGAA ATTCGAAAAATTCGACATCAAGCCGGTGCTCGAGAAACTGCTGCTCAAGGGCAGCATCGTGGTGAAGAAGGCGTATTGCG ACTGGGATCGCTACAAGACGTTCAAGGGCGCCATGCATGAAGCGAGCTTCGAGCTGATCGAGATTCCGCACGTGCGCCAG TCGGGCAAGAACTCGGCCGACATCCGCCTGGTGGTGGACGCGCTCGACCTCTGCTATACGAAATCGCACGTGGACACCTT CGTGATCATCAGCGGCGATTCCGATTTCTCCCCGCTGGTGTCGAAGCTGCGCGAGAACGCGAAGCGCGTGATCGGCGTGG GCGTGAAGAACTCGACCTCGGACCTGCTCGTGGCGAACTGCGACGAGTTTATTTTCTACGACGATCTCGCCCGCGAGCAG CAGCGCGCGCTCGCCAAGCGCGATGCGCGCACCGCCGCCGCGGCCTCGGGCAAGCGCGCCGACGACGAGCGCCAGCGCAA GCAGGACGGCGACGCACGCAAGCTCGAGGCAATCACGATCGCGGTGGAAACGTTCGACGCGCTCGCCTCGGAGCGCAGCG ACAGCGGCAAGATCTGGGCCTCGGTGCTGAAGAGCGCCATCAAGCGGCGCAAGCCGGGCTTCAACGAGAGCTATTACGGC TTCCGTGCGTTCGGCAACCTGCTCGAAGAAGCGCAGGCACGCGGCCTGCTCGAGATCGGCCGCGACGAGAAGTCGGGCAC CTACGTATCGCGCGGCGGCGTGGCCGTCGAGCCGGTCCTGACGGCCGAGCTGGCCAAGGCCGCCGAGGAAGGCGTCACGG CCGACGCGCCGGCCGAACCGGCGCGCGCCTCGCGCCATGGCGAAGGGCGGCACGGCGGCACGCGGCGCCGCGATCGCGAC GCAGCGCGCGGCGGCGACGACGCGCGCCCGGCCGACCAGGCCGGCAAGCCCGAGGAAGCGGCCGAGCCTGCCGATGCCAT CGATGCCGTCGATGCGATCGAAGCCGCCGCGCCCGCGCAGGCCGAGGCGCCGGCCACCGCGAAGCCGCATCGCGACGGCC GCCAGCCGCGCCACGCCGACGAGCGCCGCCACGCCAAGCGCGACGACGCGAGGCACGGCAAGGGGCGCGGCTCGCGCAAG CCCGAGCAGATGCCGCTGATCGACGACACGCCGGCCGCGGCCGATACCGCCGCACCGGCCCGCGCGGCCGAGCCGGAAGA GTCCGCACCGATCGCGGCGCCCGAGGCCGCGCAATGGGAAGTGGTGGACGCCGAGGCGGAGTCCGCCGCGCGGCCGGCGG CGAAGTCGGCCAAGGCGCGGAAGACGCCGGCCCGCACCCGCAAGGCGGCGGTCAGGAAGGCAGGCGCCGCGGCGGCCGAC GATGCGGCCCACGAGGCCGCGCCGGCATCGGCTCCCGCCGGCGATGCGCCCGCCGGCCTGCTGCCGGCCGACGACGCGCC GGCGCCCGCCGCCGCGAAACGCGCGCGCTCGCCCCGCAGCGGTGCGGCGCGTGCGCGCCGCCCGCGCGGCACCGCCGGCA GCGCCGACGAATCGTGA
Upstream 100 bases:
>100_bases GGCCGCCCGCGCCGCTTTTTCGGTTGGCGCGCCGCACAACCGCTATCATGTCCGCAATTTCAGCGCTCGCCGCCTTGGCG AGCCTTCGGTTGGAGAACTC
Downstream 100 bases:
>100_bases GGTCGCGGCGCGCCGCTGCGGCGGCGCGCCCACCCAGCGCTCAGGCGCTCAACCCGCCTCGCCCTCGCTGCCCACGGCCC GCGCGCCGGCGCCGTCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYCDWDRYKTFKGAMHEASFELIEIPHVRQ SGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSDFSPLVSKLRENAKRVIGVGVKNSTSDLLVANCDEFIFYDDLAREQ QRALAKRDARTAAAASGKRADDERQRKQDGDARKLEAITIAVETFDALASERSDSGKIWASVLKSAIKRRKPGFNESYYG FRAFGNLLEEAQARGLLEIGRDEKSGTYVSRGGVAVEPVLTAELAKAAEEGVTADAPAEPARASRHGEGRHGGTRRRDRD AARGGDDARPADQAGKPEEAAEPADAIDAVDAIEAAAPAQAEAPATAKPHRDGRQPRHADERRHAKRDDARHGKGRGSRK PEQMPLIDDTPAAADTAAPARAAEPEESAPIAAPEAAQWEVVDAEAESAARPAAKSAKARKTPARTRKAAVRKAGAAAAD DAAHEAAPASAPAGDAPAGLLPADDAPAPAAAKRARSPRSGAARARRPRGTAGSADES
Sequences:
>Translated_538_residues MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYCDWDRYKTFKGAMHEASFELIEIPHVRQ SGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSDFSPLVSKLRENAKRVIGVGVKNSTSDLLVANCDEFIFYDDLAREQ QRALAKRDARTAAAASGKRADDERQRKQDGDARKLEAITIAVETFDALASERSDSGKIWASVLKSAIKRRKPGFNESYYG FRAFGNLLEEAQARGLLEIGRDEKSGTYVSRGGVAVEPVLTAELAKAAEEGVTADAPAEPARASRHGEGRHGGTRRRDRD AARGGDDARPADQAGKPEEAAEPADAIDAVDAIEAAAPAQAEAPATAKPHRDGRQPRHADERRHAKRDDARHGKGRGSRK PEQMPLIDDTPAAADTAAPARAAEPEESAPIAAPEAAQWEVVDAEAESAARPAAKSAKARKTPARTRKAAVRKAGAAAAD DAAHEAAPASAPAGDAPAGLLPADDAPAPAAAKRARSPRSGAARARRPRGTAGSADES >Mature_537_residues ALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYCDWDRYKTFKGAMHEASFELIEIPHVRQS GKNSADIRLVVDALDLCYTKSHVDTFVIISGDSDFSPLVSKLRENAKRVIGVGVKNSTSDLLVANCDEFIFYDDLAREQQ RALAKRDARTAAAASGKRADDERQRKQDGDARKLEAITIAVETFDALASERSDSGKIWASVLKSAIKRRKPGFNESYYGF RAFGNLLEEAQARGLLEIGRDEKSGTYVSRGGVAVEPVLTAELAKAAEEGVTADAPAEPARASRHGEGRHGGTRRRDRDA ARGGDDARPADQAGKPEEAAEPADAIDAVDAIEAAAPAQAEAPATAKPHRDGRQPRHADERRHAKRDDARHGKGRGSRKP EQMPLIDDTPAAADTAAPARAAEPEESAPIAAPEAAQWEVVDAEAESAARPAAKSAKARKTPARTRKAAVRKAGAAAADD AAHEAAPASAPAGDAPAGLLPADDAPAPAAAKRARSPRSGAARARRPRGTAGSADES
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57300; Mature: 57169
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYCDWDRYKT CCCCCCCCCEEEEEEHHHHEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEHHCCHHHHHH FKGAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSDFSPLV HHHHHHHCCCCEEECCCHHHCCCCCCCCEEHHHHHHHHHHHCCCCEEEEEECCCCHHHHH SKLRENAKRVIGVGVKNSTSDLLVANCDEFIFYDDLAREQQRALAKRDARTAAAASGKRA HHHHHHHHHEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DDERQRKQDGDARKLEAITIAVETFDALASERSDSGKIWASVLKSAIKRRKPGFNESYYG CHHHHHHHCCCCCEEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHH FRAFGNLLEEAQARGLLEIGRDEKSGTYVSRGGVAVEPVLTAELAKAAEEGVTADAPAEP HHHHHHHHHHHHHCCHHHHCCCCCCCCEEECCCEEECHHHHHHHHHHHHCCCCCCCCCCC ARASRHGEGRHGGTRRRDRDAARGGDDARPADQAGKPEEAAEPADAIDAVDAIEAAAPAQ HHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCC AEAPATAKPHRDGRQPRHADERRHAKRDDARHGKGRGSRKPEQMPLIDDTPAAADTAAPA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RAAEPEESAPIAAPEAAQWEVVDAEAESAARPAAKSAKARKTPARTRKAAVRKAGAAAAD CCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCHHH DAAHEAAPASAPAGDAPAGLLPADDAPAPAAAKRARSPRSGAARARRPRGTAGSADES HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure ALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYCDWDRYKT CCCCCCCCEEEEEEHHHHEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEHHCCHHHHHH FKGAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSDFSPLV HHHHHHHCCCCEEECCCHHHCCCCCCCCEEHHHHHHHHHHHCCCCEEEEEECCCCHHHHH SKLRENAKRVIGVGVKNSTSDLLVANCDEFIFYDDLAREQQRALAKRDARTAAAASGKRA HHHHHHHHHEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DDERQRKQDGDARKLEAITIAVETFDALASERSDSGKIWASVLKSAIKRRKPGFNESYYG CHHHHHHHCCCCCEEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHH FRAFGNLLEEAQARGLLEIGRDEKSGTYVSRGGVAVEPVLTAELAKAAEEGVTADAPAEP HHHHHHHHHHHHHCCHHHHCCCCCCCCEEECCCEEECHHHHHHHHHHHHCCCCCCCCCCC ARASRHGEGRHGGTRRRDRDAARGGDDARPADQAGKPEEAAEPADAIDAVDAIEAAAPAQ HHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCC AEAPATAKPHRDGRQPRHADERRHAKRDDARHGKGRGSRKPEQMPLIDDTPAAADTAAPA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RAAEPEESAPIAAPEAAQWEVVDAEAESAARPAAKSAKARKTPARTRKAAVRKAGAAAAD CCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCHHH DAAHEAAPASAPAGDAPAGLLPADDAPAPAAAKRARSPRSGAARARRPRGTAGSADES HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA