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The map label for this gene is slyA [H]

Identifier: 238024605

GI number: 238024605

Start: 1556353

End: 1556805

Strand: Direct

Name: slyA [H]

Synonym: bglu_2g12200

Alternate gene names: 238024605

Gene position: 1556353-1556805 (Clockwise)

Preceding gene: 238024602

Following gene: 238024606

Centisome position: 55.05

GC content: 71.3

Gene sequence:

>453_bases
ATGATGAATCTGCATGATCTGCGCCTCGCCGTGAGCAGCACGCTGACCATTGCCGCGCGCAAGTGGCGGCGCACCAGCGA
CTCGGTGCTGACCGCCTACCACGTGTCCGAGGCCTGCGCCACGCCGCTGTTGATCGTGGGCCGGCTCGGCGAGGCGGTGC
GCCAGGTCACGCTGGCCGAATACGTCGGCATCGAGGGGCCGTCGCTGGTGCGGCTGCTCGACCAGCTCTGCGCGGCGGGC
CTCGTGCGCCGCGACGAGGATCCCGACGATCGCCGCGCGAAGACCATCACGCTGACCGACGCCGGCCGCGCGGTCACGGA
GCGGATGGAGGCGGACCTGCGCGCGCTGCGCGCCAGGGTGCTGAAATCGGTCAGCCGCGCCGACCTGGAAGCCACGCTGC
GCGTGCTGGCCGCCTTCAACGAGGCGGGAAACCGCGATCACGCCGCCTCATGA

Upstream 100 bases:

>100_bases
CAGCCTCCTGCCGGCAGGAGGCCGCCGGCCCGCGCGCCGCGCCGTGCGCCCGCGAATCAGTTAGCTTGCTATCGAATGGA
TTTCCGCTATCATGCCGGCC

Downstream 100 bases:

>100_bases
GCTATCCGTCGATCCGCGACTGGCTGTTCTCGACCAAGACCTTCGCGGCGTCGATGCTCGCGCTCTATCTCGGCCTCTAT
TTCCAGCTGCCGCGCCCCTA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MMNLHDLRLAVSSTLTIAARKWRRTSDSVLTAYHVSEACATPLLIVGRLGEAVRQVTLAEYVGIEGPSLVRLLDQLCAAG
LVRRDEDPDDRRAKTITLTDAGRAVTERMEADLRALRARVLKSVSRADLEATLRVLAAFNEAGNRDHAAS

Sequences:

>Translated_150_residues
MMNLHDLRLAVSSTLTIAARKWRRTSDSVLTAYHVSEACATPLLIVGRLGEAVRQVTLAEYVGIEGPSLVRLLDQLCAAG
LVRRDEDPDDRRAKTITLTDAGRAVTERMEADLRALRARVLKSVSRADLEATLRVLAAFNEAGNRDHAAS
>Mature_150_residues
MMNLHDLRLAVSSTLTIAARKWRRTSDSVLTAYHVSEACATPLLIVGRLGEAVRQVTLAEYVGIEGPSLVRLLDQLCAAG
LVRRDEDPDDRRAKTITLTDAGRAVTERMEADLRALRARVLKSVSRADLEATLRVLAAFNEAGNRDHAAS

Specific function: Transcription regulator that can both activate or repress expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081950, Length=121, Percent_Identity=35.5371900826446, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023071
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16407; Mature: 16407

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNLHDLRLAVSSTLTIAARKWRRTSDSVLTAYHVSEACATPLLIVGRLGEAVRQVTLAE
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVGIEGPSLVRLLDQLCAAGLVRRDEDPDDRRAKTITLTDAGRAVTERMEADLRALRARV
HHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
LKSVSRADLEATLRVLAAFNEAGNRDHAAS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MMNLHDLRLAVSSTLTIAARKWRRTSDSVLTAYHVSEACATPLLIVGRLGEAVRQVTLAE
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVGIEGPSLVRLLDQLCAAGLVRRDEDPDDRRAKTITLTDAGRAVTERMEADLRALRARV
HHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
LKSVSRADLEATLRVLAAFNEAGNRDHAAS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA