Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024599
Identifier: 238024599
GI number: 238024599
Start: 1548092
End: 1548469
Strand: Reverse
Name: 238024599
Synonym: bglu_2g12110
Alternate gene names: NA
Gene position: 1548469-1548092 (Counterclockwise)
Preceding gene: 238024600
Following gene: 238024598
Centisome position: 54.77
GC content: 50.79
Gene sequence:
>378_bases ATGAACCCCATCGAAAAAAACGCCGATCTGCTTGGGTTGTTTAATCCAGACGGGGTGCGGCTAGCCAACGAAACGGTTCG TCCGATATTTCCCGACCTCGTGGATAAACTGGCTTCGGACATCTATGGGTACGCGTATCGTCGCCAGGGAATTGATCTAA AGACGCGGCATCTCATCACACTTGGGATAATCAGTGCCATGGGAGGGTGCGAGAATCAGTTGCGTTTTCAGCTCGGCGCC GCCCTGAATCTTGGTATCTCGATTGAAGAGGTTCGTGAAGTATTCATCCAAGTACAAGTTTTTGCCGGGAACGCAAGGGC GTTCAATGCAGCAGCTATTTTCAAGTCTGTCACTGACGAGTTGCCCGATAGCGAATAG
Upstream 100 bases:
>100_bases AAAATCGTTCACGCGATCACCGCCGCCATGAAGTGATGGTGGTCTAGTCGACCTGGATAGCGGATCTCGCGATCCGCTAT CTAATAAAAATACTCAAAAA
Downstream 100 bases:
>100_bases CGATGAAATCATTGACCCCGTGGCGACTGATCGTGATGTACGTTTGCGCTGACGCGGCCGTCACCGTTTCGTCACGAATC TTACAATTCTACGCCACTTG
Product: carboxymuconolactone decarboxylase
Products: 4,5-dihydro-5-oxofuran-2-acetate; CO2
Alternate protein names: 4-Carboxymuconolactone Decarboxylase; Gamma-Carboxymuconolactone Decarboxylase
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MNPIEKNADLLGLFNPDGVRLANETVRPIFPDLVDKLASDIYGYAYRRQGIDLKTRHLITLGIISAMGGCENQLRFQLGA ALNLGISIEEVREVFIQVQVFAGNARAFNAAAIFKSVTDELPDSE
Sequences:
>Translated_125_residues MNPIEKNADLLGLFNPDGVRLANETVRPIFPDLVDKLASDIYGYAYRRQGIDLKTRHLITLGIISAMGGCENQLRFQLGA ALNLGISIEEVREVFIQVQVFAGNARAFNAAAIFKSVTDELPDSE >Mature_125_residues MNPIEKNADLLGLFNPDGVRLANETVRPIFPDLVDKLASDIYGYAYRRQGIDLKTRHLITLGIISAMGGCENQLRFQLGA ALNLGISIEEVREVFIQVQVFAGNARAFNAAAIFKSVTDELPDSE
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.1.44
Molecular weight: Translated: 13752; Mature: 13752
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPIEKNADLLGLFNPDGVRLANETVRPIFPDLVDKLASDIYGYAYRRQGIDLKTRHLIT CCCCCCCCCEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LGIISAMGGCENQLRFQLGAALNLGISIEEVREVFIQVQVFAGNARAFNAAAIFKSVTDE HHHHHHHCCCCHHHHHHHCCCEECCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHC LPDSE CCCCC >Mature Secondary Structure MNPIEKNADLLGLFNPDGVRLANETVRPIFPDLVDKLASDIYGYAYRRQGIDLKTRHLIT CCCCCCCCCEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LGIISAMGGCENQLRFQLGAALNLGISIEEVREVFIQVQVFAGNARAFNAAAIFKSVTDE HHHHHHHCCCCHHHHHHHCCCEECCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHC LPDSE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate
Specific reaction: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 4,5-dihydro-5-oxofuran-2-acetate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA