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The map label for this gene is xynB [H]

Identifier: 238024585

GI number: 238024585

Start: 1531037

End: 1532017

Strand: Direct

Name: xynB [H]

Synonym: bglu_2g11960

Alternate gene names: 238024585

Gene position: 1531037-1532017 (Clockwise)

Preceding gene: 238024582

Following gene: 238024591

Centisome position: 54.15

GC content: 76.55

Gene sequence:

>981_bases
ATGGATGACACCCGCCGCAACCTGATCGGCGCCGCCGTGGGCGGCACGCTGGGCGCGCTGCTGCCGGCCGCCGCGCGCGC
CCAGCAGCCGCCGAAGGAGCCGGCCACGGCCGCGCCGCCGCGCCTGCTGCCCGACGAGGCGATCCGGCTGTGGCGCGAGC
TGCCGCCCGATCCGCTGCCCGACATGAACCTCGACGGCGAGCGCGTGATCCGGCGCGGCGCCGTGACCGGCGTGGTCGCG
CCGCGCCTGCACGTGTACCGGCCGGTCGCGCCGAACGGCGCGGCCGCGCTGGTGATCGCGGGCGGCGGCTACGAATGCGT
GGAGCTGGCCCATGAAAGCGGCCCGGTCTGCCGCTGGCTGGCCTCGCTCGGCGTGACCGCCTACGAGCTCGTCTACCGCC
TGCCCGAGCAGGGCTGGCAGCGCGGCGCGCCGCTGCAGGACGGCCAGCGCGCGATGCGCGTGATCCGCGCGCGCGCGCAG
CGCGACGGCATCGATCCGGCGCGCATCGCGATCATGGGCTTCTCGGCGGGCGGCCACCTGGCCGGCATGACCGCGTTCGA
TCCGAACGCGCGGCGCTATCCCGAGACCGACGGCGCCGACCGGCTCTCGGCGCGCCCGAACCTGGCCGCGCTGATCTATC
CGGTGCTCACGCTGTTGCCGCCGTTCGAGCACACCCGCTCGCACCGCCACCTGCTCGGCGAGGCGCCGCCGGCGGGCGCC
GCCGAGGCGCTCTCGCCGGTGCTGCGGATCGACGCCAACGCGCCGCGCACGTTCCTCGCGCAGGCGCTCGACGATCCGAT
CGTGCCGGTGGACAACGTGCTGCTCGCGCACGCCGCGCTGCGCAGCGCGCGCGTGCCGGCCGCGCTGCACGTCTACCAGT
CGGGCGGGCACGGCTGGTCGCTCGGCGTGCCGGACAGCGAGCCGGCCTCGTGGCCGAAGCTGTTCGCGCGCTGGGCGCGC
ACCAACCGCTGGTTCGCTTGA

Upstream 100 bases:

>100_bases
ATGGTTCCGGCCCCGGATTTATACATTACGTCACAACCCGAAGTGCCTCGATGCGGTTAAATGCAAGCCTGACGTGATGG
CTTCATGCCCCCTCCCAGAT

Downstream 100 bases:

>100_bases
GGGCCGGGCGGCGGCTCACTCGCCGCTGCGCGCGCGCTTCCTGAGCAGATAGGTATCCATGATCCAGCCGTGCCGCTCGC
GCGCCTCGGCGCGGACCCGC

Product: Twin-arginine translocation pathway signal sequence domain-containing protein

Products: NA

Alternate protein names: Xylanase B; 1,4-beta-D-xylan xylanohydrolase B [H]

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MDDTRRNLIGAAVGGTLGALLPAAARAQQPPKEPATAAPPRLLPDEAIRLWRELPPDPLPDMNLDGERVIRRGAVTGVVA
PRLHVYRPVAPNGAAALVIAGGGYECVELAHESGPVCRWLASLGVTAYELVYRLPEQGWQRGAPLQDGQRAMRVIRARAQ
RDGIDPARIAIMGFSAGGHLAGMTAFDPNARRYPETDGADRLSARPNLAALIYPVLTLLPPFEHTRSHRHLLGEAPPAGA
AEALSPVLRIDANAPRTFLAQALDDPIVPVDNVLLAHAALRSARVPAALHVYQSGGHGWSLGVPDSEPASWPKLFARWAR
TNRWFA

Sequences:

>Translated_326_residues
MDDTRRNLIGAAVGGTLGALLPAAARAQQPPKEPATAAPPRLLPDEAIRLWRELPPDPLPDMNLDGERVIRRGAVTGVVA
PRLHVYRPVAPNGAAALVIAGGGYECVELAHESGPVCRWLASLGVTAYELVYRLPEQGWQRGAPLQDGQRAMRVIRARAQ
RDGIDPARIAIMGFSAGGHLAGMTAFDPNARRYPETDGADRLSARPNLAALIYPVLTLLPPFEHTRSHRHLLGEAPPAGA
AEALSPVLRIDANAPRTFLAQALDDPIVPVDNVLLAHAALRSARVPAALHVYQSGGHGWSLGVPDSEPASWPKLFARWAR
TNRWFA
>Mature_326_residues
MDDTRRNLIGAAVGGTLGALLPAAARAQQPPKEPATAAPPRLLPDEAIRLWRELPPDPLPDMNLDGERVIRRGAVTGVVA
PRLHVYRPVAPNGAAALVIAGGGYECVELAHESGPVCRWLASLGVTAYELVYRLPEQGWQRGAPLQDGQRAMRVIRARAQ
RDGIDPARIAIMGFSAGGHLAGMTAFDPNARRYPETDGADRLSARPNLAALIYPVLTLLPPFEHTRSHRHLLGEAPPAGA
AEALSPVLRIDANAPRTFLAQALDDPIVPVDNVLLAHAALRSARVPAALHVYQSGGHGWSLGVPDSEPASWPKLFARWAR
TNRWFA

Specific function: B.fibrisolvens is located in the rumen of ruminant animals, where it contributes to the animal's digestion of plant material by hydrolyzing hemicellulose with its xylanases [H]

COG id: COG0657

COG function: function code I; Esterase/lipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 10 (cellulase F) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013094
- InterPro:   IPR001000
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF07859 Abhydrolase_3; PF00331 Glyco_hydro_10 [H]

EC number: =3.2.1.8 [H]

Molecular weight: Translated: 35005; Mature: 35005

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDTRRNLIGAAVGGTLGALLPAAARAQQPPKEPATAAPPRLLPDEAIRLWRELPPDPLP
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
DMNLDGERVIRRGAVTGVVAPRLHVYRPVAPNGAAALVIAGGGYECVELAHESGPVCRWL
CCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHH
ASLGVTAYELVYRLPEQGWQRGAPLQDGQRAMRVIRARAQRDGIDPARIAIMGFSAGGHL
HHHCHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCC
AGMTAFDPNARRYPETDGADRLSARPNLAALIYPVLTLLPPFEHTRSHRHLLGEAPPAGA
CEECCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCH
AEALSPVLRIDANAPRTFLAQALDDPIVPVDNVLLAHAALRSARVPAALHVYQSGGHGWS
HHHHHHHHEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEE
LGVPDSEPASWPKLFARWARTNRWFA
CCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDDTRRNLIGAAVGGTLGALLPAAARAQQPPKEPATAAPPRLLPDEAIRLWRELPPDPLP
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
DMNLDGERVIRRGAVTGVVAPRLHVYRPVAPNGAAALVIAGGGYECVELAHESGPVCRWL
CCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHH
ASLGVTAYELVYRLPEQGWQRGAPLQDGQRAMRVIRARAQRDGIDPARIAIMGFSAGGHL
HHHCHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCC
AGMTAFDPNARRYPETDGADRLSARPNLAALIYPVLTLLPPFEHTRSHRHLLGEAPPAGA
CEECCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCH
AEALSPVLRIDANAPRTFLAQALDDPIVPVDNVLLAHAALRSARVPAALHVYQSGGHGWS
HHHHHHHHEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEE
LGVPDSEPASWPKLFARWARTNRWFA
CCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1909424 [H]