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The map label for this gene is soxC [H]

Identifier: 238024582

GI number: 238024582

Start: 1525385

End: 1526662

Strand: Direct

Name: soxC [H]

Synonym: bglu_2g11930

Alternate gene names: 238024582

Gene position: 1525385-1526662 (Clockwise)

Preceding gene: 238024573

Following gene: 238024585

Centisome position: 53.95

GC content: 75.27

Gene sequence:

>1278_bases
ATGTCGTCCCCCTCCGTCCCCCTGCGCTCGGCCGGCGCCGACTACGACGCGCTCGCCGCGCGTTTCCGGCCCGTCTTCGC
GCGCATCGCCAGCGGCGCCGTGGAGCGCGACCGCCACCGCACGCTGCCCGTCGAGGCGATCGGCTGGCTCAGGCAGGCCG
GCTTCGGCGCGCTGCGCGTGCCGACGGCCTCGGGCGGCCTCGGCGCCTCGATCCCGCAGCTGTTGCGCCTGCTGATCGAG
CTCGCCGCCGCCGATTCGAACCTGCCGCAGGCGCTGCGCGGCCATTTCGCATTCGTCGAGGACTGGCTCAACGCGCCGCC
CGGCGCCGCGCGCGACACCTGGCTCGCCCGCTTCGCGGCCGGGCAGCTGGTCGGCAACGCCTGGAGCGAAACCGGCGAGG
CGGCGCTCGGCGAGGCGCGCACCCGCGTCTCGCGCCGTGACCAAGGCTGGGTCGTCAACGGCGAGAAGTTCTACACCACC
GGCAGCCTGTTCGCGGACTGGATCGACGTGTACGCGCAGCGCGAGGCCGACGGCGCGCCGGTGATCGCGGCCGTCGCCAC
GGCCCAGCCCGGCGTCACGCTGGTCGACGACTGGGACGGCTTCGGCCAGCGCACCACCGGCAGCGGCACGACGCGCTTCA
CCGAGGCCCGCGTCGATCCGCACGGCTTGATCGACTTCTCGCGGCGCTTTCGCTACCAGACCGCGTTCTATCAGCTGTTC
CATCTGGCGACGCTGGCCGGCATCGCGCGCGCGGCCGAACGCGACGCCGGCCGCCTGGTGCGCGAGCGCAAGCGGATCTA
CAGCCACGGCAACGCCGCGCGCGCCGGCGACGATCCGCAGATCCTGCAGGTGGTGGGCGAAGTGGCGTCCTGGGCCTACG
CGGCCGAGGCGATCACGCTGCGCGCGGCCGAGCCCGCGCAGCGCGCCTACGAACTGCACGACGGCGCCGGCACGCCGGCC
GAGCACGCGGCCAACGTGGCCGCCGAACTCGAATCGGCACAGGCGCAGGTGGTGGTGACCGACCTCGTGCTGCGCGCGGC
CACCCATCTGTTCGACGCGCTCGGCGCGTCGGCCACGCGCGGCGCGGCGGCGCTCGACCGCCACTGGCGCAACGCGCGCA
CCGTGGCCTCGCACAATCCGGTGGTGTACAAGGCGCGGATCGTCGGCGCCCACTCGGTCGACGGCACCGAGCCGCCGACC
GTCTGGAAGGTCGGCGTGGCGCCCGAGGGCGCGGCGCAGGCCGGCGCCGGCACCCCGGCCAAGCGCGCCGCGGCCTGA

Upstream 100 bases:

>100_bases
TTGCGCCGATCGGAATATGGTTCCCCGAACTGCTTGGTTGTCAGTTGCGCGCGCCGCTCCGTATAAATCGGGCTTGTCCG
ATCCGTCAGGAGCTACCGCC

Downstream 100 bases:

>100_bases
GCCCGGCGGCGCGAAGCGGCCGGCTCGTCCGCGCCGCGGCGCGCTCGGCACGGCCGCTCACCGGAACCGTTCCGGCCGGC
CGCTTCGATGCGCCGCGCGG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MSSPSVPLRSAGADYDALAARFRPVFARIASGAVERDRHRTLPVEAIGWLRQAGFGALRVPTASGGLGASIPQLLRLLIE
LAAADSNLPQALRGHFAFVEDWLNAPPGAARDTWLARFAAGQLVGNAWSETGEAALGEARTRVSRRDQGWVVNGEKFYTT
GSLFADWIDVYAQREADGAPVIAAVATAQPGVTLVDDWDGFGQRTTGSGTTRFTEARVDPHGLIDFSRRFRYQTAFYQLF
HLATLAGIARAAERDAGRLVRERKRIYSHGNAARAGDDPQILQVVGEVASWAYAAEAITLRAAEPAQRAYELHDGAGTPA
EHAANVAAELESAQAQVVVTDLVLRAATHLFDALGASATRGAAALDRHWRNARTVASHNPVVYKARIVGAHSVDGTEPPT
VWKVGVAPEGAAQAGAGTPAKRAAA

Sequences:

>Translated_425_residues
MSSPSVPLRSAGADYDALAARFRPVFARIASGAVERDRHRTLPVEAIGWLRQAGFGALRVPTASGGLGASIPQLLRLLIE
LAAADSNLPQALRGHFAFVEDWLNAPPGAARDTWLARFAAGQLVGNAWSETGEAALGEARTRVSRRDQGWVVNGEKFYTT
GSLFADWIDVYAQREADGAPVIAAVATAQPGVTLVDDWDGFGQRTTGSGTTRFTEARVDPHGLIDFSRRFRYQTAFYQLF
HLATLAGIARAAERDAGRLVRERKRIYSHGNAARAGDDPQILQVVGEVASWAYAAEAITLRAAEPAQRAYELHDGAGTPA
EHAANVAAELESAQAQVVVTDLVLRAATHLFDALGASATRGAAALDRHWRNARTVASHNPVVYKARIVGAHSVDGTEPPT
VWKVGVAPEGAAQAGAGTPAKRAAA
>Mature_424_residues
SSPSVPLRSAGADYDALAARFRPVFARIASGAVERDRHRTLPVEAIGWLRQAGFGALRVPTASGGLGASIPQLLRLLIEL
AAADSNLPQALRGHFAFVEDWLNAPPGAARDTWLARFAAGQLVGNAWSETGEAALGEARTRVSRRDQGWVVNGEKFYTTG
SLFADWIDVYAQREADGAPVIAAVATAQPGVTLVDDWDGFGQRTTGSGTTRFTEARVDPHGLIDFSRRFRYQTAFYQLFH
LATLAGIARAAERDAGRLVRERKRIYSHGNAARAGDDPQILQVVGEVASWAYAAEAITLRAAEPAQRAYELHDGAGTPAE
HAANVAAELESAQAQVVVTDLVLRAATHLFDALGASATRGAAALDRHWRNARTVASHNPVVYKARIVGAHSVDGTEPPTV
WKVGVAPEGAAQAGAGTPAKRAAA

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 45161; Mature: 45030

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPSVPLRSAGADYDALAARFRPVFARIASGAVERDRHRTLPVEAIGWLRQAGFGALRV
CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEC
PTASGGLGASIPQLLRLLIELAAADSNLPQALRGHFAFVEDWLNAPPGAARDTWLARFAA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GQLVGNAWSETGEAALGEARTRVSRRDQGWVVNGEKFYTTGSLFADWIDVYAQREADGAP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECHHHHHHHHHHHHHCCCCCCC
VIAAVATAQPGVTLVDDWDGFGQRTTGSGTTRFTEARVDPHGLIDFSRRFRYQTAFYQLF
EEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH
HLATLAGIARAAERDAGRLVRERKRIYSHGNAARAGDDPQILQVVGEVASWAYAAEAITL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEE
RAAEPAQRAYELHDGAGTPAEHAANVAAELESAQAQVVVTDLVLRAATHLFDALGASATR
ECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GAAALDRHWRNARTVASHNPVVYKARIVGAHSVDGTEPPTVWKVGVAPEGAAQAGAGTPA
HHHHHHHHHHHHCHHCCCCCEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCH
KRAAA
HHCCC
>Mature Secondary Structure 
SSPSVPLRSAGADYDALAARFRPVFARIASGAVERDRHRTLPVEAIGWLRQAGFGALRV
CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEC
PTASGGLGASIPQLLRLLIELAAADSNLPQALRGHFAFVEDWLNAPPGAARDTWLARFAA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GQLVGNAWSETGEAALGEARTRVSRRDQGWVVNGEKFYTTGSLFADWIDVYAQREADGAP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECHHHHHHHHHHHHHCCCCCCC
VIAAVATAQPGVTLVDDWDGFGQRTTGSGTTRFTEARVDPHGLIDFSRRFRYQTAFYQLF
EEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH
HLATLAGIARAAERDAGRLVRERKRIYSHGNAARAGDDPQILQVVGEVASWAYAAEAITL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEE
RAAEPAQRAYELHDGAGTPAEHAANVAAELESAQAQVVVTDLVLRAATHLFDALGASATR
ECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GAAALDRHWRNARTVASHNPVVYKARIVGAHSVDGTEPPTVWKVGVAPEGAAQAGAGTPA
HHHHHHHHHHHHCHHCCCCCEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCH
KRAAA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]