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The map label for this gene is ypaA [H]

Identifier: 229918317

GI number: 229918317

Start: 2572082

End: 2572474

Strand: Reverse

Name: ypaA [H]

Synonym: EAT1b_2602

Alternate gene names: 229918317

Gene position: 2572474-2572082 (Counterclockwise)

Preceding gene: 229918318

Following gene: 229918313

Centisome position: 85.75

GC content: 46.06

Gene sequence:

>393_bases
ATGTCGACGCTCACCCTTGTGCTCGGGACGCTCGTCGCCATCGAATTCTTCTATATCTTCTATTTAGAGACGATCGCGAC
GGCATCTTCCTCGACGTCACGTGTCTTCCGCATGTCGAAAGACGAGCTGACGAGGGACTCGGTATCGGTTTTGTTTAAAA
ATCAAGGCGTCTATAACGGGTTGATTGGGGTCGGTCTCTTATACGGGCTATACGTCTCCCCTAACCCGGTCGAGATTGTC
ACCATGATGCTGACCTATATTATTCTCGTTGCCCTATATGGCAGTATCACGAGTGACAAGAAGATTATCCTGACACAAGG
TGGGCTCGCCATCTTGACGTTATTACTCAATCCATTTTTTAAAAGTAATAATCATAAATTAAAAAGGGGATGA

Upstream 100 bases:

>100_bases
GAGCAGCACAACCAAAACCCGGTCCTCATCAACTTCGCACAAAACGTCGCAAACTACGTGTCTGCGAAACCGGTCGTACA
AGTAGCAGCGGTCAACTAAT

Downstream 100 bases:

>100_bases
ATGTCATAAATTGGACATTCATCCCCTTTTTAATTACTTTATTATCTTCACTAACATTCTTCAAACAAATATATCTCATG
TATACGTTCATCTATCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MSTLTLVLGTLVAIEFFYIFYLETIATASSSTSRVFRMSKDELTRDSVSVLFKNQGVYNGLIGVGLLYGLYVSPNPVEIV
TMMLTYIILVALYGSITSDKKIILTQGGLAILTLLLNPFFKSNNHKLKRG

Sequences:

>Translated_130_residues
MSTLTLVLGTLVAIEFFYIFYLETIATASSSTSRVFRMSKDELTRDSVSVLFKNQGVYNGLIGVGLLYGLYVSPNPVEIV
TMMLTYIILVALYGSITSDKKIILTQGGLAILTLLLNPFFKSNNHKLKRG
>Mature_129_residues
STLTLVLGTLVAIEFFYIFYLETIATASSSTSRVFRMSKDELTRDSVSVLFKNQGVYNGLIGVGLLYGLYVSPNPVEIVT
MMLTYIILVALYGSITSDKKIILTQGGLAILTLLLNPFFKSNNHKLKRG

Specific function: Unknown

COG id: COG3759

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009732 [H]

Pfam domain/function: PF06993 DUF1304 [H]

EC number: NA

Molecular weight: Translated: 14364; Mature: 14233

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLTLVLGTLVAIEFFYIFYLETIATASSSTSRVFRMSKDELTRDSVSVLFKNQGVYNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCHHH
LIGVGLLYGLYVSPNPVEIVTMMLTYIILVALYGSITSDKKIILTQGGLAILTLLLNPFF
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
KSNNHKLKRG
CCCCCCCCCC
>Mature Secondary Structure 
STLTLVLGTLVAIEFFYIFYLETIATASSSTSRVFRMSKDELTRDSVSVLFKNQGVYNG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCHHH
LIGVGLLYGLYVSPNPVEIVTMMLTYIILVALYGSITSDKKIILTQGGLAILTLLLNPFF
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
KSNNHKLKRG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1400208; 11337471 [H]