Definition | Exiguobacterium sp. AT1b, complete genome. |
---|---|
Accession | NC_012673 |
Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229918307
Identifier: 229918307
GI number: 229918307
Start: 2557896
End: 2559551
Strand: Reverse
Name: 229918307
Synonym: EAT1b_2591
Alternate gene names: NA
Gene position: 2559551-2557896 (Counterclockwise)
Preceding gene: 229918308
Following gene: 229918306
Centisome position: 85.32
GC content: 39.13
Gene sequence:
>1656_bases ATGACACAAGGTATTATTAGTAACTTATTTACTCAACATGAAGGAGATACTGTCTCTAGACGCTCCATCGATTTGATCAA ACGTGTTTATTTAAATGACACACGTCCATGGGTGGTCGGATTTAGTGGCGGAAAAGATTCTACACTAACGACTCAACTCA TTTTCGAAGCGTTGCTAGAGCTTTCACCAGAACAGTTGCATAAGAAGGTATTTATCATTTCTTCTGACACTTTGGTAGAA AACCCACTCGTTGTTTCCATGATTAACGGCTCTTTACACCGCATGCAAGAAGCCGCTTTTAAATATAATCTCCCAATCGA AACACAAAAAGTTAAACCACTTACAGAAAAAACTTTTTGGACGAATATTATTGGACGTGGCTACCCTACTCCGAACCAAA CGTTTAGATGGTGTACAGATCGTCTTAAAATCGACCCTGCTAACCGCTTCATTAAAGATAAAGTGTCAAAATACGGCGAA ATTATTATGGTACTTGGTGTCCGTTCATCTGAGAGCACGAGCCGAGGCCAATCCATAAAAGATCATGAGATTTCAGGTAG CGAATTGATGCGACACACATCATTAGCGAATGCTTATGTATTTGCCCCAATTAAAGAATTTGTTCTAGATGATGTATGGA GCTACCTTCTTCAAAACCCAGCTCCGTGGGGGGAAGACCATCACAAGCTGCAGAAAATGTACATGGATTCAAGTAGCGAA TGTCCATTAGTCGTTGACCAAAACATTAAAGAAAGTGCTGGTTCTTGTGGGAATAGCCGTTTCGGTTGCTGGACGTGTAC GGTTGTCAATCAAGATAAATCGCTTACTGGCTTTATTCAAACTGGTGAACATGACTGGTTAAAACCATTATTGAAGTTCC GCAATAAAATGGTTCTCATTCGTGACGACCGTTCTAAACGAATGCATAAACGAATGAATGGTGCCTTCTATTTATTAGAA GTTCAACATGAAATCAAAGAAGATGGAATCTATATTGTTCAAAAGAAAAAAGGCGGTCGTGCTGCCACTTCTCATAAAGT AGTTGACCGAATTGAAGATTTGACTGATGAGTCTGTTCTTGCCGTTCCTAAAGCACAATTAAGTCAATTTATCGCAAAAC ACAATATTGACTTGAGCAAACCTGAAGAGTTCAATATTCAGTTTGTCGTTACCGAAACAAACGAGGATGGGCAATCTGCA TACTCACACCTTGGTCTTGGTCCTTTCACACTAGCTACTAGAAATGAACTAATGCGCGACTTATTGATTTTACAACGTGA TTTAAAAGTTCCAAATTCAGTCGAGTACAAATTAATTCAGGATGATGAGTTACGAGCAATTCGTCGCTTATGGCTCCGTG AAGGTGATTGGAACGATACTTTACCAGAACTTTATCGCGAAGTATTCGGCGTCGACCTGGATTGGGAACATGATGATCGT CAGATTCTAACAAGTGACCAAGCGAATGATTTAGAACTTCTTTCTCAAAAGTATGGTCTTGATTTCAATATGGTTCAAAA ACTATTTACAACAGCAAATGATTTTCTAGGTGTAAAGGTTAAACGAGGATTTAATAAAGATGTCGCTGCGCTATTGAGCC AAGACTATTTAAGCCTTTACAAAGAGCAAGGAGTTTTAGAGAGAGATGAAGATTGA
Upstream 100 bases:
>100_bases CTAATCGGCATCAAGCTCACGAAAGAAGAGAAAGATTTCGATCAACAAAAATCAAGCATGAACGTATTATGACTGTTTTG GCACGAGAGGATGACAATTT
Downstream 100 bases:
>100_bases ATCGATTGTCTTAAAGAATATTGGAGCATATAAAAATCAAACATTTGATTTCAAGAATGAAAACTCTAATAAAAATGTTA TTTTAATCGGCGGGAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MTQGIISNLFTQHEGDTVSRRSIDLIKRVYLNDTRPWVVGFSGGKDSTLTTQLIFEALLELSPEQLHKKVFIISSDTLVE NPLVVSMINGSLHRMQEAAFKYNLPIETQKVKPLTEKTFWTNIIGRGYPTPNQTFRWCTDRLKIDPANRFIKDKVSKYGE IIMVLGVRSSESTSRGQSIKDHEISGSELMRHTSLANAYVFAPIKEFVLDDVWSYLLQNPAPWGEDHHKLQKMYMDSSSE CPLVVDQNIKESAGSCGNSRFGCWTCTVVNQDKSLTGFIQTGEHDWLKPLLKFRNKMVLIRDDRSKRMHKRMNGAFYLLE VQHEIKEDGIYIVQKKKGGRAATSHKVVDRIEDLTDESVLAVPKAQLSQFIAKHNIDLSKPEEFNIQFVVTETNEDGQSA YSHLGLGPFTLATRNELMRDLLILQRDLKVPNSVEYKLIQDDELRAIRRLWLREGDWNDTLPELYREVFGVDLDWEHDDR QILTSDQANDLELLSQKYGLDFNMVQKLFTTANDFLGVKVKRGFNKDVAALLSQDYLSLYKEQGVLERDED
Sequences:
>Translated_551_residues MTQGIISNLFTQHEGDTVSRRSIDLIKRVYLNDTRPWVVGFSGGKDSTLTTQLIFEALLELSPEQLHKKVFIISSDTLVE NPLVVSMINGSLHRMQEAAFKYNLPIETQKVKPLTEKTFWTNIIGRGYPTPNQTFRWCTDRLKIDPANRFIKDKVSKYGE IIMVLGVRSSESTSRGQSIKDHEISGSELMRHTSLANAYVFAPIKEFVLDDVWSYLLQNPAPWGEDHHKLQKMYMDSSSE CPLVVDQNIKESAGSCGNSRFGCWTCTVVNQDKSLTGFIQTGEHDWLKPLLKFRNKMVLIRDDRSKRMHKRMNGAFYLLE VQHEIKEDGIYIVQKKKGGRAATSHKVVDRIEDLTDESVLAVPKAQLSQFIAKHNIDLSKPEEFNIQFVVTETNEDGQSA YSHLGLGPFTLATRNELMRDLLILQRDLKVPNSVEYKLIQDDELRAIRRLWLREGDWNDTLPELYREVFGVDLDWEHDDR QILTSDQANDLELLSQKYGLDFNMVQKLFTTANDFLGVKVKRGFNKDVAALLSQDYLSLYKEQGVLERDED >Mature_550_residues TQGIISNLFTQHEGDTVSRRSIDLIKRVYLNDTRPWVVGFSGGKDSTLTTQLIFEALLELSPEQLHKKVFIISSDTLVEN PLVVSMINGSLHRMQEAAFKYNLPIETQKVKPLTEKTFWTNIIGRGYPTPNQTFRWCTDRLKIDPANRFIKDKVSKYGEI IMVLGVRSSESTSRGQSIKDHEISGSELMRHTSLANAYVFAPIKEFVLDDVWSYLLQNPAPWGEDHHKLQKMYMDSSSEC PLVVDQNIKESAGSCGNSRFGCWTCTVVNQDKSLTGFIQTGEHDWLKPLLKFRNKMVLIRDDRSKRMHKRMNGAFYLLEV QHEIKEDGIYIVQKKKGGRAATSHKVVDRIEDLTDESVLAVPKAQLSQFIAKHNIDLSKPEEFNIQFVVTETNEDGQSAY SHLGLGPFTLATRNELMRDLLILQRDLKVPNSVEYKLIQDDELRAIRRLWLREGDWNDTLPELYREVFGVDLDWEHDDRQ ILTSDQANDLELLSQKYGLDFNMVQKLFTTANDFLGVKVKRGFNKDVAALLSQDYLSLYKEQGVLERDED
Specific function: Unknown
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR002478 - InterPro: IPR015947 - InterPro: IPR014729 - InterPro: IPR004521 [H]
Pfam domain/function: PF01507 PAPS_reduct; PF01472 PUA [H]
EC number: NA
Molecular weight: Translated: 63290; Mature: 63159
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQGIISNLFTQHEGDTVSRRSIDLIKRVYLNDTRPWVVGFSGGKDSTLTTQLIFEALLE CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH LSPEQLHKKVFIISSDTLVENPLVVSMINGSLHRMQEAAFKYNLPIETQKVKPLTEKTFW CCHHHHCCEEEEEECCCEECCCEEEEECCCHHHHHHHHHHEECCCCCCCCCCCCHHHHHH TNIIGRGYPTPNQTFRWCTDRLKIDPANRFIKDKVSKYGEIIMVLGVRSSESTSRGQSIK HHHHCCCCCCCCCHHHHHHHHEEECHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC DHEISGSELMRHTSLANAYVFAPIKEFVLDDVWSYLLQNPAPWGEDHHKLQKMYMDSSSE CCCCCHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC CPLVVDQNIKESAGSCGNSRFGCWTCTVVNQDKSLTGFIQTGEHDWLKPLLKFRNKMVLI CCEEECCCCHHHCCCCCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHCCCEEEE RDDRSKRMHKRMNGAFYLLEVQHEIKEDGIYIVQKKKGGRAATSHKVVDRIEDLTDESVL ECCHHHHHHHHCCCEEEEEEEHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEE AVPKAQLSQFIAKHNIDLSKPEEFNIQFVVTETNEDGQSAYSHLGLGPFTLATRNELMRD ECCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHH LLILQRDLKVPNSVEYKLIQDDELRAIRRLWLREGDWNDTLPELYREVFGVDLDWEHDDR HHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC QILTSDQANDLELLSQKYGLDFNMVQKLFTTANDFLGVKVKRGFNKDVAALLSQDYLSLY CEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHH KEQGVLERDED HHCCCCCCCCC >Mature Secondary Structure TQGIISNLFTQHEGDTVSRRSIDLIKRVYLNDTRPWVVGFSGGKDSTLTTQLIFEALLE CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH LSPEQLHKKVFIISSDTLVENPLVVSMINGSLHRMQEAAFKYNLPIETQKVKPLTEKTFW CCHHHHCCEEEEEECCCEECCCEEEEECCCHHHHHHHHHHEECCCCCCCCCCCCHHHHHH TNIIGRGYPTPNQTFRWCTDRLKIDPANRFIKDKVSKYGEIIMVLGVRSSESTSRGQSIK HHHHCCCCCCCCCHHHHHHHHEEECHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC DHEISGSELMRHTSLANAYVFAPIKEFVLDDVWSYLLQNPAPWGEDHHKLQKMYMDSSSE CCCCCHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC CPLVVDQNIKESAGSCGNSRFGCWTCTVVNQDKSLTGFIQTGEHDWLKPLLKFRNKMVLI CCEEECCCCHHHCCCCCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHCCCEEEE RDDRSKRMHKRMNGAFYLLEVQHEIKEDGIYIVQKKKGGRAATSHKVVDRIEDLTDESVL ECCHHHHHHHHCCCEEEEEEEHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEE AVPKAQLSQFIAKHNIDLSKPEEFNIQFVVTETNEDGQSAYSHLGLGPFTLATRNELMRD ECCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHH LLILQRDLKVPNSVEYKLIQDDELRAIRRLWLREGDWNDTLPELYREVFGVDLDWEHDDR HHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC QILTSDQANDLELLSQKYGLDFNMVQKLFTTANDFLGVKVKRGFNKDVAALLSQDYLSLY CEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHH KEQGVLERDED HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]