Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229918308

Identifier: 229918308

GI number: 229918308

Start: 2559580

End: 2560680

Strand: Reverse

Name: 229918308

Synonym: EAT1b_2592

Alternate gene names: NA

Gene position: 2560680-2559580 (Counterclockwise)

Preceding gene: 229918309

Following gene: 229918307

Centisome position: 85.36

GC content: 36.51

Gene sequence:

>1101_bases
ATGGATCCTAATTTCAGCTATAACTTCCCCGCATTACGAGGAAAACAGGCAGAAAAAGAATATTTCGTCGTTATGTGCCC
GTTAAAACTGATTCCAAAAATTTTCTTATTCGATGAAGAGGAAGTCCCACCACAATACCGCTCACAGCGGATTTTGAATA
AATCTAGAGTTCCAGACATTACAAATTACATTGTAGATCAGTCCAAGGACTATGTATTTTCATCCCTTACAGCTTCCATT
GATGGTGAAATTCAGTTTACTCCGTTTACAGATGAACCAAACTTTAAAGACTTAGGCAAACTCTCGATCGCACTGGATTC
CCGTTTTTTAATTAATGATGGTCAACACCGGAGAGCAGCGATTGAAGAGGCTTTAAAAATTATGCCTGAGCTTGGTAATG
AAACAATTTCTGTTGTATTCTTTCATGATGAAGGTCTAGAACGATCTCAACAAATTTTTTCAGATTTGAATCGACATGCC
GTTAACACAACGTCATCTATCGGTATTTTATATGATCATCGTGATCAGTTATCGCTCCTTACTAAAGAAATCGTTGAAGA
GATTCCGTTGTTAAAACGGTATACAGAAATGGAGAAAACGTCCCTCTCCAAGAATTCACCAAAACTTTTAGCGTTAAATC
ATATTTATAATGCAAATAAACGACTAATTAATAAGAAAAAAGGTGCTCTTTTAACTGAAGAAGACGCATTGAACATCAAA
ACGTTTTGGCTAACTCTATGCAATAGTATTCATGAATGGGAACAAGTATTTAATAAAGAAATCTCCCCTCGTGATTTACG
TATGATTTCAATTGCGGGTCAAGGTTTATTTATCGAAGCAGCGGCTGAAGTTGCGCGCTCTTTAATTGAACAAAAACCTG
ATACATGGACAGCCTACCTTACAAAATTTAAAGATATTGATTGGAGCCGTTCAAACGAAAAAGATTGGAAAGGTCGTGCC
TTTAACGAAAACGGCAGAATTTTAAAGAACAACTACACTATTCGATTGACTGCCATACGAATCAAATCGCTAATCGGCAT
CAAGCTCACGAAAGAAGAGAAAGATTTCGATCAACAAAAATCAAGCATGAACGTATTATGA

Upstream 100 bases:

>100_bases
TTCGCTTTTTTCATACGAACACTTATGTTAGACTTTTTGTATAAAAACATTGTATTTATTTAAAATTACGTACGTAATTT
TAAATAAAGGAGGACATCTT

Downstream 100 bases:

>100_bases
CTGTTTTGGCACGAGAGGATGACAATTTATGACACAAGGTATTATTAGTAACTTATTTACTCAACATGAAGGAGATACTG
TCTCTAGACGCTCCATCGAT

Product: DNA sulfur modification protein DndB

Products: NA

Alternate protein names: DGQHR Domain Protein; Bacteriophage Protein; Thiol Protease Domain-Containing Protein; DGQHR Domain-Containing Protein; DNA Thiolation Protein

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MDPNFSYNFPALRGKQAEKEYFVVMCPLKLIPKIFLFDEEEVPPQYRSQRILNKSRVPDITNYIVDQSKDYVFSSLTASI
DGEIQFTPFTDEPNFKDLGKLSIALDSRFLINDGQHRRAAIEEALKIMPELGNETISVVFFHDEGLERSQQIFSDLNRHA
VNTTSSIGILYDHRDQLSLLTKEIVEEIPLLKRYTEMEKTSLSKNSPKLLALNHIYNANKRLINKKKGALLTEEDALNIK
TFWLTLCNSIHEWEQVFNKEISPRDLRMISIAGQGLFIEAAAEVARSLIEQKPDTWTAYLTKFKDIDWSRSNEKDWKGRA
FNENGRILKNNYTIRLTAIRIKSLIGIKLTKEEKDFDQQKSSMNVL

Sequences:

>Translated_366_residues
MDPNFSYNFPALRGKQAEKEYFVVMCPLKLIPKIFLFDEEEVPPQYRSQRILNKSRVPDITNYIVDQSKDYVFSSLTASI
DGEIQFTPFTDEPNFKDLGKLSIALDSRFLINDGQHRRAAIEEALKIMPELGNETISVVFFHDEGLERSQQIFSDLNRHA
VNTTSSIGILYDHRDQLSLLTKEIVEEIPLLKRYTEMEKTSLSKNSPKLLALNHIYNANKRLINKKKGALLTEEDALNIK
TFWLTLCNSIHEWEQVFNKEISPRDLRMISIAGQGLFIEAAAEVARSLIEQKPDTWTAYLTKFKDIDWSRSNEKDWKGRA
FNENGRILKNNYTIRLTAIRIKSLIGIKLTKEEKDFDQQKSSMNVL
>Mature_366_residues
MDPNFSYNFPALRGKQAEKEYFVVMCPLKLIPKIFLFDEEEVPPQYRSQRILNKSRVPDITNYIVDQSKDYVFSSLTASI
DGEIQFTPFTDEPNFKDLGKLSIALDSRFLINDGQHRRAAIEEALKIMPELGNETISVVFFHDEGLERSQQIFSDLNRHA
VNTTSSIGILYDHRDQLSLLTKEIVEEIPLLKRYTEMEKTSLSKNSPKLLALNHIYNANKRLINKKKGALLTEEDALNIK
TFWLTLCNSIHEWEQVFNKEISPRDLRMISIAGQGLFIEAAAEVARSLIEQKPDTWTAYLTKFKDIDWSRSNEKDWKGRA
FNENGRILKNNYTIRLTAIRIKSLIGIKLTKEEKDFDQQKSSMNVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42346; Mature: 42346

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPNFSYNFPALRGKQAEKEYFVVMCPLKLIPKIFLFDEEEVPPQYRSQRILNKSRVPDI
CCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCHH
TNYIVDQSKDYVFSSLTASIDGEIQFTPFTDEPNFKDLGKLSIALDSRFLINDGQHRRAA
HHHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHCCEEEEECCEEEECCCCHHHHH
IEEALKIMPELGNETISVVFFHDEGLERSQQIFSDLNRHAVNTTSSIGILYDHRDQLSLL
HHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH
TKEIVEEIPLLKRYTEMEKTSLSKNSPKLLALNHIYNANKRLINKKKGALLTEEDALNIK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCHHHHHHHHCCCEEECCCCCCHH
TFWLTLCNSIHEWEQVFNKEISPRDLRMISIAGQGLFIEAAAEVARSLIEQKPDTWTAYL
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHCCCCHHHHHH
TKFKDIDWSRSNEKDWKGRAFNENGRILKNNYTIRLTAIRIKSLIGIKLTKEEKDFDQQK
HHHHCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEEEEEHHHHCEEEECCHHHHHHHH
SSMNVL
HCCCCC
>Mature Secondary Structure
MDPNFSYNFPALRGKQAEKEYFVVMCPLKLIPKIFLFDEEEVPPQYRSQRILNKSRVPDI
CCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCHH
TNYIVDQSKDYVFSSLTASIDGEIQFTPFTDEPNFKDLGKLSIALDSRFLINDGQHRRAA
HHHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHCCEEEEECCEEEECCCCHHHHH
IEEALKIMPELGNETISVVFFHDEGLERSQQIFSDLNRHAVNTTSSIGILYDHRDQLSLL
HHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH
TKEIVEEIPLLKRYTEMEKTSLSKNSPKLLALNHIYNANKRLINKKKGALLTEEDALNIK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCHHHHHHHHCCCEEECCCCCCHH
TFWLTLCNSIHEWEQVFNKEISPRDLRMISIAGQGLFIEAAAEVARSLIEQKPDTWTAYL
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHCCCCHHHHHH
TKFKDIDWSRSNEKDWKGRAFNENGRILKNNYTIRLTAIRIKSLIGIKLTKEEKDFDQQK
HHHHCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEEEEEHHHHCEEEECCHHHHHHHH
SSMNVL
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA