Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is ywbO [H]
Identifier: 229918267
GI number: 229918267
Start: 2512011
End: 2512706
Strand: Reverse
Name: ywbO [H]
Synonym: EAT1b_2550
Alternate gene names: 229918267
Gene position: 2512706-2512011 (Counterclockwise)
Preceding gene: 229918268
Following gene: 229918266
Centisome position: 83.76
GC content: 52.73
Gene sequence:
>696_bases ATGAAAATTGAAGTATGGTCAGATTATGTCTGCCCGTTTTGTTATATCGGGAAGCGTCGTCTAGAAGAGGCGCTCGAACA GTTCCCACAGGCAGATCAAGTCGAAGTCGAATTCAAGAGTTTCGAGCTCGACCCGAACGCCCCGACGGACGATTCACGTA CCATCTATGAAGCGCTTGCTACGAAGTATGGCATGCCGATCGAACAGGCGAAAGGGACGACGGCTCAAGTCGCTGCACAA GCCCGCGAAGTCGGACTCGATTATGATTTTGAGAACATGGTCGTGACGGGGACGCTCGACTCGCACCGTTTGACGCATTA TGCGAAGACGGTCGGGAAAGAGAAAGAATTGTCGGAAGCGTTGCTTCAGGCGTACTTCGTCGATGCGAAACACATCGGGA ATCACGATGTGCTGCTTGAAATCGCGACAAGCGTCGGACTCGATTCTGACGCGGTTCGTGACGTCTTGACGACTGACATG TATACGGAAGACGTACGTGTCGAAGAAAAACGCGCGAGCGACCTCGGCATCACGGGTGTGCCGTTCTTCGTATTCGACAA CAAGTACGGGGTGTCCGGTGCTCAGCCGACAGAAGCGTTCACGCAAGTGCTCGAAAAAGTCTGGTCTGAGAACAACCCGA CAATCCAAGTCCTTTCGAACGGTGCGACGTGCACTGACGACAACTGTGATATTTGA
Upstream 100 bases:
>100_bases TACGTCTTTTAAGTCCTCCTCGTGGAGGGCTTATTTTCATGAGCCGTTTCCTGTACTTTGAATTCAAGATTTCCTACACT AAGGACAGGAGGGATTCATC
Downstream 100 bases:
>100_bases TTTTTGATTGATGAAGAAGCCGACGTTCGGCTTCTTTTTTGTGGTATTCTTCACCCTACTACTTGATAATAGTGATTAGC ATATAAGAATCGAGGACTAC
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKIEVWSDYVCPFCYIGKRRLEEALEQFPQADQVEVEFKSFELDPNAPTDDSRTIYEALATKYGMPIEQAKGTTAQVAAQ AREVGLDYDFENMVVTGTLDSHRLTHYAKTVGKEKELSEALLQAYFVDAKHIGNHDVLLEIATSVGLDSDAVRDVLTTDM YTEDVRVEEKRASDLGITGVPFFVFDNKYGVSGAQPTEAFTQVLEKVWSENNPTIQVLSNGATCTDDNCDI
Sequences:
>Translated_231_residues MKIEVWSDYVCPFCYIGKRRLEEALEQFPQADQVEVEFKSFELDPNAPTDDSRTIYEALATKYGMPIEQAKGTTAQVAAQ AREVGLDYDFENMVVTGTLDSHRLTHYAKTVGKEKELSEALLQAYFVDAKHIGNHDVLLEIATSVGLDSDAVRDVLTTDM YTEDVRVEEKRASDLGITGVPFFVFDNKYGVSGAQPTEAFTQVLEKVWSENNPTIQVLSNGATCTDDNCDI >Mature_231_residues MKIEVWSDYVCPFCYIGKRRLEEALEQFPQADQVEVEFKSFELDPNAPTDDSRTIYEALATKYGMPIEQAKGTTAQVAAQ AREVGLDYDFENMVVTGTLDSHRLTHYAKTVGKEKELSEALLQAYFVDAKHIGNHDVLLEIATSVGLDSDAVRDVLTTDM YTEDVRVEEKRASDLGITGVPFFVFDNKYGVSGAQPTEAFTQVLEKVWSENNPTIQVLSNGATCTDDNCDI
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 25754; Mature: 25754
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIEVWSDYVCPFCYIGKRRLEEALEQFPQADQVEVEFKSFELDPNAPTDDSRTIYEALA CEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHH TKYGMPIEQAKGTTAQVAAQAREVGLDYDFENMVVTGTLDSHRLTHYAKTVGKEKELSEA HHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHH LLQAYFVDAKHIGNHDVLLEIATSVGLDSDAVRDVLTTDMYTEDVRVEEKRASDLGITGV HHHHHHHHHHHCCCCHHEEHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC PFFVFDNKYGVSGAQPTEAFTQVLEKVWSENNPTIQVLSNGATCTDDNCDI EEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCCCCC >Mature Secondary Structure MKIEVWSDYVCPFCYIGKRRLEEALEQFPQADQVEVEFKSFELDPNAPTDDSRTIYEALA CEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHH TKYGMPIEQAKGTTAQVAAQAREVGLDYDFENMVVTGTLDSHRLTHYAKTVGKEKELSEA HHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHH LLQAYFVDAKHIGNHDVLLEIATSVGLDSDAVRDVLTTDMYTEDVRVEEKRASDLGITGV HHHHHHHHHHHCCCCHHEEHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC PFFVFDNKYGVSGAQPTEAFTQVLEKVWSENNPTIQVLSNGATCTDDNCDI EEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]