Click here to switch to the map view.

The map label for this gene is yqjV [H]

Identifier: 229918139

GI number: 229918139

Start: 2369420

End: 2370652

Strand: Reverse

Name: yqjV [H]

Synonym: EAT1b_2419

Alternate gene names: 229918139

Gene position: 2370652-2369420 (Counterclockwise)

Preceding gene: 229918140

Following gene: 229918138

Centisome position: 79.02

GC content: 48.26

Gene sequence:

>1233_bases
ATGAAATTTAAAGATTTTCCATTAAATGTCCGCTTGCGACTCGTTTGCGGATTTTGCATTCGAATCGTCGGATCAGCCAT
TTTCCCATTCATGGCACTCTATTTCTCAGAAGAGTTGGGGAAAGTGCCAGCCGGTATCATCATGATCTCATTCGTTATCG
TCGGTTACTTGACCGGTCTATTCGGTGGGTACTTTTCCGATCGGTTCAATCGGAAGGTTGTCTTACAGATTGGCCAGGTG
ATTCAAATCATCTGTTTTCTTGGGATGACCATCGCGATTCACCCATCGAATAACTGGGCACTCATCGTTGCCATCCTCTA
CTTCGGACATGCCGTTTCGAACGGATTGAACTATCCAGCTCTCGAGGCGATCGTCATCGATTCGATGGAAGAATCAAATC
GAAAAGCCATCTACGTGTATGACTACTGGCTCGTCAATTTAGCGATTGCCGGAGGCGTCATGCTCGGCGGCGCCTTTTAT
CGCGACCATCGCTTCGCCCTCTTCATTGGTATGACGGTCATTCTCACTGTGACCACAATCATTCTTCAACGTTTCTTGGT
CGACACATATACTGGCAACCGCTCAACACCGTCAAACCCGATTCATGGTGTCATCGAAAACTATAAAATCGCGTTACGCG
ACCGCCGATGGATCACATTCGTATTTGGAAGTATGCTCGTCTTTTCGACCGAGTTTCATATGGCGAACTATATCGGTGTT
CATTTAGCAGAGTCATTCGAAAGTCGTCAAATTCTCGGAATACCTGTTGATGGGGTTCGCATGATGGCGTTTATGCAACT
AGAGAATACCTTGCTCGTCGTCGCCATCACGTTTGCGGTTACTGCGTTCGTCAAACGTTTCAAAGAGAAGACCATATTTT
TCATTGGCTTATCGTTATATATCACAGCATACGCCGCCATCACCTCAATGAACTCCTTCATCGTTCTGGCCGTACTCGCG
ATTATCTTCACAATTGGCGAACTCCTCTACTCGCCGATTCGACAAGTGAAACAGGTTGACCTCCTCGACCCTGAACGCCG
TGCCTCTTATCTTGCATTCGGCGGCCTCACGTTCCACGGAGCCAAATTGGTTGCCGCGGCAGGCATTGTCGTCGGCGCGT
TCATCGGTCCGGTCTTGATGAGCGGTTACATGTTCGTCTTCGGTGCCCTCGGTGCTTACTTGTATTATGTATCGCTCTAT
AAGATGCAACCTGCTCGCCAACTCGCTGCTTGA

Upstream 100 bases:

>100_bases
ATCTCTTTTTTTCGTCTAAAAGGGGACATCTTCAAAAAAAGTGTCTCTTTTTACTTAGTACCGTCCCCCATTACAGTAGA
ACCAAGGAGGTGCTCACCAT

Downstream 100 bases:

>100_bases
CGTTTAACATGAAGACAAAACGGTAAAACAGTACGATGAAGGAGGCGAACTACTTGCCTGCGATTGTTTTATTTGATGGC
GATTGCAACTTCTGTGATGC

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MKFKDFPLNVRLRLVCGFCIRIVGSAIFPFMALYFSEELGKVPAGIIMISFVIVGYLTGLFGGYFSDRFNRKVVLQIGQV
IQIICFLGMTIAIHPSNNWALIVAILYFGHAVSNGLNYPALEAIVIDSMEESNRKAIYVYDYWLVNLAIAGGVMLGGAFY
RDHRFALFIGMTVILTVTTIILQRFLVDTYTGNRSTPSNPIHGVIENYKIALRDRRWITFVFGSMLVFSTEFHMANYIGV
HLAESFESRQILGIPVDGVRMMAFMQLENTLLVVAITFAVTAFVKRFKEKTIFFIGLSLYITAYAAITSMNSFIVLAVLA
IIFTIGELLYSPIRQVKQVDLLDPERRASYLAFGGLTFHGAKLVAAAGIVVGAFIGPVLMSGYMFVFGALGAYLYYVSLY
KMQPARQLAA

Sequences:

>Translated_410_residues
MKFKDFPLNVRLRLVCGFCIRIVGSAIFPFMALYFSEELGKVPAGIIMISFVIVGYLTGLFGGYFSDRFNRKVVLQIGQV
IQIICFLGMTIAIHPSNNWALIVAILYFGHAVSNGLNYPALEAIVIDSMEESNRKAIYVYDYWLVNLAIAGGVMLGGAFY
RDHRFALFIGMTVILTVTTIILQRFLVDTYTGNRSTPSNPIHGVIENYKIALRDRRWITFVFGSMLVFSTEFHMANYIGV
HLAESFESRQILGIPVDGVRMMAFMQLENTLLVVAITFAVTAFVKRFKEKTIFFIGLSLYITAYAAITSMNSFIVLAVLA
IIFTIGELLYSPIRQVKQVDLLDPERRASYLAFGGLTFHGAKLVAAAGIVVGAFIGPVLMSGYMFVFGALGAYLYYVSLY
KMQPARQLAA
>Mature_410_residues
MKFKDFPLNVRLRLVCGFCIRIVGSAIFPFMALYFSEELGKVPAGIIMISFVIVGYLTGLFGGYFSDRFNRKVVLQIGQV
IQIICFLGMTIAIHPSNNWALIVAILYFGHAVSNGLNYPALEAIVIDSMEESNRKAIYVYDYWLVNLAIAGGVMLGGAFY
RDHRFALFIGMTVILTVTTIILQRFLVDTYTGNRSTPSNPIHGVIENYKIALRDRRWITFVFGSMLVFSTEFHMANYIGV
HLAESFESRQILGIPVDGVRMMAFMQLENTLLVVAITFAVTAFVKRFKEKTIFFIGLSLYITAYAAITSMNSFIVLAVLA
IIFTIGELLYSPIRQVKQVDLLDPERRASYLAFGGLTFHGAKLVAAAGIVVGAFIGPVLMSGYMFVFGALGAYLYYVSLY
KMQPARQLAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829
- InterPro:   IPR001958 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45688; Mature: 45688

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKDFPLNVRLRLVCGFCIRIVGSAIFPFMALYFSEELGKVPAGIIMISFVIVGYLTGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FGGYFSDRFNRKVVLQIGQVIQIICFLGMTIAIHPSNNWALIVAILYFGHAVSNGLNYPA
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCH
LEAIVIDSMEESNRKAIYVYDYWLVNLAIAGGVMLGGAFYRDHRFALFIGMTVILTVTTI
HHHHEEECHHCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHH
ILQRFLVDTYTGNRSTPSNPIHGVIENYKIALRDRRWITFVFGSMLVFSTEFHMANYIGV
HHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
HLAESFESRQILGIPVDGVRMMAFMQLENTLLVVAITFAVTAFVKRFKEKTIFFIGLSLY
HHHHCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHH
ITAYAAITSMNSFIVLAVLAIIFTIGELLYSPIRQVKQVDLLDPERRASYLAFGGLTFHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEECCCEECC
AKLVAAAGIVVGAFIGPVLMSGYMFVFGALGAYLYYVSLYKMQPARQLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure
MKFKDFPLNVRLRLVCGFCIRIVGSAIFPFMALYFSEELGKVPAGIIMISFVIVGYLTGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FGGYFSDRFNRKVVLQIGQVIQIICFLGMTIAIHPSNNWALIVAILYFGHAVSNGLNYPA
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCH
LEAIVIDSMEESNRKAIYVYDYWLVNLAIAGGVMLGGAFYRDHRFALFIGMTVILTVTTI
HHHHEEECHHCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHH
ILQRFLVDTYTGNRSTPSNPIHGVIENYKIALRDRRWITFVFGSMLVFSTEFHMANYIGV
HHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
HLAESFESRQILGIPVDGVRMMAFMQLENTLLVVAITFAVTAFVKRFKEKTIFFIGLSLY
HHHHCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHH
ITAYAAITSMNSFIVLAVLAIIFTIGELLYSPIRQVKQVDLLDPERRASYLAFGGLTFHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEECCCEECC
AKLVAAAGIVVGAFIGPVLMSGYMFVFGALGAYLYYVSLYKMQPARQLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]