Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is lacX [H]
Identifier: 229918034
GI number: 229918034
Start: 2265246
End: 2266100
Strand: Reverse
Name: lacX [H]
Synonym: EAT1b_2313
Alternate gene names: 229918034
Gene position: 2266100-2265246 (Counterclockwise)
Preceding gene: 229918036
Following gene: 229918030
Centisome position: 75.54
GC content: 48.89
Gene sequence:
>855_bases GTGCAACTACAAAACGAGAAAATACAGATTACCTTAAAGGCACAAGGTGCTGAGATGACGAGTTGGAAAGTATCTGGAAC TGAACTCTTATGGCAAGGGGACCCGACCTACTGGGGACGACAAGCCCCGATCCTCTTCCCGATTGTCGGGCGGTTGCTCG ATGATCAATATGTATATGAGGGAAACACCTATACGATGAGTCAACACGGATTCGCCCGGGACGCTATGTTCGAAATCGAA TCTTCGACAGCCACGTCGGTCCGCTTCACATTGAACGATACATCGGAATCGCGTCAACACTATCCATTCCCATTCACACT GTCCGTGTCCTATCAACTTGTGGGCGAAGAAGTGATTGTGACGTATCGAGTCCATAACTCGGGCGAAGCGACGTTACCGT TTAGCATCGGTGGTCATCCTGCATTCAATATTCCGTTCATGGGTGGGACATTTGAAGACTACGTGATCGATTTCGGCGAA ATCCGCTCTCTCGATCGCTACTTGCTCGAGGGTCCTTATTTAACAGGCGCGTATCAACCACTCGGAGAGCGTCAGTATAT CCCCCTCACTCGGTCGTTATTTGACGACGACGCACTCATTTTTGAGAAGATTGAATATGCCGCACTCCGACATCAACCGA CCGGCGCAGCCATCGTGATGGAAAGTCCCTCTTTCACGCATTTCGGCATCTGGTCTCCGCCACAGAAAGACGCTCCGTTC GTCTGTTTGGAACCTTGGTTCGGACATGCGGATTATAAAGGACATCGAAAAGATTTCCTACACAAAGAAGGGATCCAACT TCTTGCACCAAATGAGACGTTTGAAGCAAGTTACACATTATATGTGGAGAACTAA
Upstream 100 bases:
>100_bases CAATACCAATTCTTTGTAAGCGCATCATTTACCCCTTGTTTGTTTTACTTAAGATTTCTACACTTAACTTATCATAAACC CGTAAAGGAGCGTATGGATT
Downstream 100 bases:
>100_bases AAAAATCAATCCGACGTCTTGTCGGATTGATTTTTTGGTTTAGAAGCGATCGTCTTGTTCGGCTTCATATTCTGACACTG GCTTTTTCATGATGAGCGCC
Product: Aldose 1-epimerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MQLQNEKIQITLKAQGAEMTSWKVSGTELLWQGDPTYWGRQAPILFPIVGRLLDDQYVYEGNTYTMSQHGFARDAMFEIE SSTATSVRFTLNDTSESRQHYPFPFTLSVSYQLVGEEVIVTYRVHNSGEATLPFSIGGHPAFNIPFMGGTFEDYVIDFGE IRSLDRYLLEGPYLTGAYQPLGERQYIPLTRSLFDDDALIFEKIEYAALRHQPTGAAIVMESPSFTHFGIWSPPQKDAPF VCLEPWFGHADYKGHRKDFLHKEGIQLLAPNETFEASYTLYVEN
Sequences:
>Translated_284_residues MQLQNEKIQITLKAQGAEMTSWKVSGTELLWQGDPTYWGRQAPILFPIVGRLLDDQYVYEGNTYTMSQHGFARDAMFEIE SSTATSVRFTLNDTSESRQHYPFPFTLSVSYQLVGEEVIVTYRVHNSGEATLPFSIGGHPAFNIPFMGGTFEDYVIDFGE IRSLDRYLLEGPYLTGAYQPLGERQYIPLTRSLFDDDALIFEKIEYAALRHQPTGAAIVMESPSFTHFGIWSPPQKDAPF VCLEPWFGHADYKGHRKDFLHKEGIQLLAPNETFEASYTLYVEN >Mature_284_residues MQLQNEKIQITLKAQGAEMTSWKVSGTELLWQGDPTYWGRQAPILFPIVGRLLDDQYVYEGNTYTMSQHGFARDAMFEIE SSTATSVRFTLNDTSESRQHYPFPFTLSVSYQLVGEEVIVTYRVHNSGEATLPFSIGGHPAFNIPFMGGTFEDYVIDFGE IRSLDRYLLEGPYLTGAYQPLGERQYIPLTRSLFDDDALIFEKIEYAALRHQPTGAAIVMESPSFTHFGIWSPPQKDAPF VCLEPWFGHADYKGHRKDFLHKEGIQLLAPNETFEASYTLYVEN
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: NA
Molecular weight: Translated: 32354; Mature: 32354
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLQNEKIQITLKAQGAEMTSWKVSGTELLWQGDPTYWGRQAPILFPIVGRLLDDQYVYE CCCCCCEEEEEEEECCCEEEEEEECCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEE GNTYTMSQHGFARDAMFEIESSTATSVRFTLNDTSESRQHYPFPFTLSVSYQLVGEEVIV CCEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCEEEE TYRVHNSGEATLPFSIGGHPAFNIPFMGGTFEDYVIDFGEIRSLDRYLLEGPYLTGAYQP EEEEECCCCEEEEEEECCCCEEECCCCCCCHHHHHCCHHHHHHHHHHHHCCCEECCCCCC LGERQYIPLTRSLFDDDALIFEKIEYAALRHQPTGAAIVMESPSFTHFGIWSPPQKDAPF CCCCEECCHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCCCCE VCLEPWFGHADYKGHRKDFLHKEGIQLLAPNETFEASYTLYVEN EEECCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCEEEEEEEEC >Mature Secondary Structure MQLQNEKIQITLKAQGAEMTSWKVSGTELLWQGDPTYWGRQAPILFPIVGRLLDDQYVYE CCCCCCEEEEEEEECCCEEEEEEECCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEE GNTYTMSQHGFARDAMFEIESSTATSVRFTLNDTSESRQHYPFPFTLSVSYQLVGEEVIV CCEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCEEEE TYRVHNSGEATLPFSIGGHPAFNIPFMGGTFEDYVIDFGEIRSLDRYLLEGPYLTGAYQP EEEEECCCCEEEEEEECCCCEEECCCCCCCHHHHHCCHHHHHHHHHHHHCCCEECCCCCC LGERQYIPLTRSLFDDDALIFEKIEYAALRHQPTGAAIVMESPSFTHFGIWSPPQKDAPF CCCCEECCHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCCCCE VCLEPWFGHADYKGHRKDFLHKEGIQLLAPNETFEASYTLYVEN EEECCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339371 [H]