Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229917825
Identifier: 229917825
GI number: 229917825
Start: 2055591
End: 2056430
Strand: Reverse
Name: 229917825
Synonym: EAT1b_2103
Alternate gene names: NA
Gene position: 2056430-2055591 (Counterclockwise)
Preceding gene: 229917827
Following gene: 229917824
Centisome position: 68.55
GC content: 48.69
Gene sequence:
>840_bases ATGACGGAAGCATTGGTTTTGCAATCAGATTTTGGAGTAAGTGATGGAGCAGTCAGCGCGATGTACGGTGTAGCACACAG CATTAATCCAAACATTCGTATCTTTGATTTAACACATGACATCCCGCCGTTCCATATTTGGGAGGCCTCCTATCGCCTCG TTCAAACCGTCCCCTACTGGACCGAGCAGACTGTATTTGTCTCGGTCGTGGACCCAGGTGTCGGTTCGAACCGAAAGAGT GTCGTCGCACGAACGCATGCCAATCAATATGTCATCACTCCCGATAACGGGACGTTGACACATCTTTGGCAAGCAGGGCT TCTTGCAGAAGTTCGAGAGTTGGATGACAAAACGCACAGGCTACCGCGCATGGGGGAATCCTATACGTTTCATGGACGTG ATATTTTCGCCTTTACGGGTGCTCGATTATCTAGCCATGACATCACGTTCGAGGAAGTCGGTCCGCTCATCCCGCTTGAC GAAATCGCCTTACTCGATCGGACACCCGCCACACGTGATGAAGATGCCGTTGAAGGGATAGTCGAGATTTTAGATATTCG TTTCGGGAACGTCTGGACGAATATCCCGGTTCAACTCGTCCGACAGGCTGGTGTCGATATCGGTCATCGTGTTATCATCA CGATTTCGTTCCGTGAACGTACAGTTTACGAACAAACCTTATCGTTTGGTCGCTCGTTCGCAGATGTTCCTGTCGGTTCA GGCGTCGTCTATATCAACTCGCTCGATCAAATCGCTATCGCTCTAAATCAAGGATCCTTTGCTCATGCTTTTGATATCGG TATCGGGAATGATTGGAAAGTTCGCTTACAACAAATTTAA
Upstream 100 bases:
>100_bases ATCATGAACAAAGGTGGTACCACGTGATCAGACATCACGTCCTGCGTAATGAGGGCGAGATGTCTTTTTTATGGGGTCCG CCCGGAAGGAGGAGACGGAA
Downstream 100 bases:
>100_bases GGAGGAAAAATTCATGAACTCATTCACAACGAAACAAATCGTCGCAACAGGAATCGGCGCAGCCGTTTTCATCATCCTCA GTCGCTTTGCCGCTATCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTEALVLQSDFGVSDGAVSAMYGVAHSINPNIRIFDLTHDIPPFHIWEASYRLVQTVPYWTEQTVFVSVVDPGVGSNRKS VVARTHANQYVITPDNGTLTHLWQAGLLAEVRELDDKTHRLPRMGESYTFHGRDIFAFTGARLSSHDITFEEVGPLIPLD EIALLDRTPATRDEDAVEGIVEILDIRFGNVWTNIPVQLVRQAGVDIGHRVIITISFRERTVYEQTLSFGRSFADVPVGS GVVYINSLDQIAIALNQGSFAHAFDIGIGNDWKVRLQQI
Sequences:
>Translated_279_residues MTEALVLQSDFGVSDGAVSAMYGVAHSINPNIRIFDLTHDIPPFHIWEASYRLVQTVPYWTEQTVFVSVVDPGVGSNRKS VVARTHANQYVITPDNGTLTHLWQAGLLAEVRELDDKTHRLPRMGESYTFHGRDIFAFTGARLSSHDITFEEVGPLIPLD EIALLDRTPATRDEDAVEGIVEILDIRFGNVWTNIPVQLVRQAGVDIGHRVIITISFRERTVYEQTLSFGRSFADVPVGS GVVYINSLDQIAIALNQGSFAHAFDIGIGNDWKVRLQQI >Mature_278_residues TEALVLQSDFGVSDGAVSAMYGVAHSINPNIRIFDLTHDIPPFHIWEASYRLVQTVPYWTEQTVFVSVVDPGVGSNRKSV VARTHANQYVITPDNGTLTHLWQAGLLAEVRELDDKTHRLPRMGESYTFHGRDIFAFTGARLSSHDITFEEVGPLIPLDE IALLDRTPATRDEDAVEGIVEILDIRFGNVWTNIPVQLVRQAGVDIGHRVIITISFRERTVYEQTLSFGRSFADVPVGSG VVYINSLDQIAIALNQGSFAHAFDIGIGNDWKVRLQQI
Specific function: Unknown
COG id: COG1912
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002747 - InterPro: IPR023227 - InterPro: IPR023228 [H]
Pfam domain/function: PF01887 DUF62 [H]
EC number: NA
Molecular weight: Translated: 31054; Mature: 30923
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEALVLQSDFGVSDGAVSAMYGVAHSINPNIRIFDLTHDIPPFHIWEASYRLVQTVPYW CCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEHHHHEEEEECCCC TEQTVFVSVVDPGVGSNRKSVVARTHANQYVITPDNGTLTHLWQAGLLAEVRELDDKTHR CCCEEEEEEECCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH LPRMGESYTFHGRDIFAFTGARLSSHDITFEEVGPLIPLDEIALLDRTPATRDEDAVEGI CCCCCCCEEECCCEEEEEECCCCCCCCCCHHHCCCCCCHHHHHEECCCCCCCCHHHHHHH VEILDIRFGNVWTNIPVQLVRQAGVDIGHRVIITISFRERTVYEQTLSFGRSFADVPVGS HHHHHHHCCCEECCCHHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHHCCCCCCCCCCC GVVYINSLDQIAIALNQGSFAHAFDIGIGNDWKVRLQQI CEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECC >Mature Secondary Structure TEALVLQSDFGVSDGAVSAMYGVAHSINPNIRIFDLTHDIPPFHIWEASYRLVQTVPYW CCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEHHHHEEEEECCCC TEQTVFVSVVDPGVGSNRKSVVARTHANQYVITPDNGTLTHLWQAGLLAEVRELDDKTHR CCCEEEEEEECCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH LPRMGESYTFHGRDIFAFTGARLSSHDITFEEVGPLIPLDEIALLDRTPATRDEDAVEGI CCCCCCCEEECCCEEEEEECCCCCCCCCCHHHCCCCCCHHHHHEECCCCCCCCHHHHHHH VEILDIRFGNVWTNIPVQLVRQAGVDIGHRVIITISFRERTVYEQTLSFGRSFADVPVGS HHHHHHHCCCEECCCHHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHHCCCCCCCCCCC GVVYINSLDQIAIALNQGSFAHAFDIGIGNDWKVRLQQI CEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]