Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229917824
Identifier: 229917824
GI number: 229917824
Start: 2055026
End: 2055577
Strand: Reverse
Name: 229917824
Synonym: EAT1b_2102
Alternate gene names: NA
Gene position: 2055577-2055026 (Counterclockwise)
Preceding gene: 229917825
Following gene: 229917823
Centisome position: 68.52
GC content: 47.64
Gene sequence:
>552_bases ATGAACTCATTCACAACGAAACAAATCGTCGCAACAGGAATCGGCGCAGCCGTTTTCATCATCCTCAGTCGCTTTGCCGC TATCCCAACAGGTGTACCGAACACCTCAATCGAAACAGCCTACGCGTTTCTTGCATTCATGGCCGTCTTATTCGGGCCTA TCACAGCTGGTTTGATTGGTTTAATCGGTCACGCGCTGAAAGATGCGATTCTATACGGATCCCCTTGGTGGAGTTGGGTC ATTGTTTCAGGTTTTGTCGGTCTCGGAATCGGTCTCATCGCCAATCGCATCCGTCTTGAGGAAGGTGGTTTGACGACTAA AAAAATCATTTTGTTCAATGCCACTCAAGCTGTCGTACAAGCCATCGGATGGATTGTCATCGCACCGGTCCTTGATATTT TGATTTACGCTGAACCAGCGAACAAAGTGTTCGTACAAGGTGCTGTGGCAGCCACTTCGAATATTTTGACAGTCGGTGTC ATCGGGACATTACTCCTTGTCACTTACGCAAAAACACGAAGCCAGGCGGGAAGTTTAAAACGAGAAGCATAA
Upstream 100 bases:
>100_bases GCTATCGCTCTAAATCAAGGATCCTTTGCTCATGCTTTTGATATCGGTATCGGGAATGATTGGAAAGTTCGCTTACAACA AATTTAAGGAGGAAAAATTC
Downstream 100 bases:
>100_bases TGACGAAGGGCTGGCATCATGTCACACATGACTTCAGCCCTTTTGTATGGAGGTCACACGCTTGAAAACCATGATTGAAT TCACTCATTTCTCATTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MNSFTTKQIVATGIGAAVFIILSRFAAIPTGVPNTSIETAYAFLAFMAVLFGPITAGLIGLIGHALKDAILYGSPWWSWV IVSGFVGLGIGLIANRIRLEEGGLTTKKIILFNATQAVVQAIGWIVIAPVLDILIYAEPANKVFVQGAVAATSNILTVGV IGTLLLVTYAKTRSQAGSLKREA
Sequences:
>Translated_183_residues MNSFTTKQIVATGIGAAVFIILSRFAAIPTGVPNTSIETAYAFLAFMAVLFGPITAGLIGLIGHALKDAILYGSPWWSWV IVSGFVGLGIGLIANRIRLEEGGLTTKKIILFNATQAVVQAIGWIVIAPVLDILIYAEPANKVFVQGAVAATSNILTVGV IGTLLLVTYAKTRSQAGSLKREA >Mature_183_residues MNSFTTKQIVATGIGAAVFIILSRFAAIPTGVPNTSIETAYAFLAFMAVLFGPITAGLIGLIGHALKDAILYGSPWWSWV IVSGFVGLGIGLIANRIRLEEGGLTTKKIILFNATQAVVQAIGWIVIAPVLDILIYAEPANKVFVQGAVAATSNILTVGV IGTLLLVTYAKTRSQAGSLKREA
Specific function: Unknown
COG id: COG4720
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0397 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2102_EXISA (C4L1J3)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002886470.1 - GeneID: 7870527 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_2102 - OMA: EPANKVF - ProtClustDB: PRK13661 - HAMAP: MF_01572 - InterPro: IPR009825 - InterPro: IPR022914
Pfam domain/function: PF07155 DUF1393
EC number: NA
Molecular weight: Translated: 19201; Mature: 19201
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x91f9ed4)-; HASH(0xe423290)-; HASH(0xe8fe1b0)-; HASH(0x403d6ca4)-; HASH(0xe1d878c)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSFTTKQIVATGIGAAVFIILSRFAAIPTGVPNTSIETAYAFLAFMAVLFGPITAGLIG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LIGHALKDAILYGSPWWSWVIVSGFVGLGIGLIANRIRLEEGGLTTKKIILFNATQAVVQ HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEECHHHHHH AIGWIVIAPVLDILIYAEPANKVFVQGAVAATSNILTVGVIGTLLLVTYAKTRSQAGSLK HHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC REA CCH >Mature Secondary Structure MNSFTTKQIVATGIGAAVFIILSRFAAIPTGVPNTSIETAYAFLAFMAVLFGPITAGLIG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LIGHALKDAILYGSPWWSWVIVSGFVGLGIGLIANRIRLEEGGLTTKKIILFNATQAVVQ HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEECHHHHHH AIGWIVIAPVLDILIYAEPANKVFVQGAVAATSNILTVGVIGTLLLVTYAKTRSQAGSLK HHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC REA CCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA