Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is ald [H]
Identifier: 229917750
GI number: 229917750
Start: 1980062
End: 1981192
Strand: Reverse
Name: ald [H]
Synonym: EAT1b_2028
Alternate gene names: 229917750
Gene position: 1981192-1980062 (Counterclockwise)
Preceding gene: 229917751
Following gene: 229917747
Centisome position: 66.04
GC content: 51.02
Gene sequence:
>1131_bases ATGAAAATCGGGGTATTGAAAGAGATTAAAAACAATGAAAATCGGGTGGCCTTAACACCGATGGGTGCATTTATGTTAAC GGAGCTTGGTCATGATGTATTCGTCGAAACGAATGCCGGTCTCGGTAGCGGCTTCACGAATATGGAATATATTGATGCTG GTGCGACGATTCTTGAAACGGCGAAAGAAGTTTGGGAAGGCGTCGAACTCGCTCTCAAAGTAAAAGAACCACAACCGTCT GAGTATCAATACTTCCGTCCTGACTTGACGCTCTTCACTTATCTACACCTTGCGGCGGAGCCGGAATTAACGAAAGCGCT CGTCGATTCAGGGATTACAGCGATCGCCTACGAGACGGTAGAAGTGGACCGCACGTTACCACTCCTCACACCGATGAGTG AAGTGGCGGGACGTATGGCTGCGCAAATCGGAGCCCAAATCCTCGAAAAACCACATGGTGGAAAGGGAATCTTAATGTCT GGTCTCCCAGGTGTGCCTCGTGCGAACGTCACGGTCATCGGAGGCGGTGTCGTCGGAACGAATGCAGCTCGAATCGCAAT CGGTCTTGGGGCGAGCGTGACGTTGATGGACATTAGCCCGGCTCGTCTTCGTCAAATCGACGACTTGTTCGGAAACACAA TCAATACGTTGATCTCAAATAAATACAACATTGCGAAACAAGTGGCTGAGAGTGACCTTGTGATTGGTGCCGTGCTCATC CCAGGAGCAAAAGCACCGAAACTCGTCACGGAAGAAATGGTACAGCGCATGTCGCCTGGTTCGGTCATCGTCGACGTCGC CATCGACCAAGGTGGAATTTGTGAGACGATCGACCACATCACGACGCATGATGCGCCAACGTATGAGCGCTATGGCGTGC AACACTACGCTGTCGCTAACATGCCAGGTGCCGTGCCACGCACTTCGACAATGGGTCTGACAAACGCGACGATGCCATAT ATCATCGAGTGTGCACAAAAAGGCGTATTCCCAGCACTTCTTGAAAACGAGGCGCTTCTCAAAGGCCTAAACGTCATCAA CGGAACGGTCACGTATGAAGCGGTCGCACGTGATTTGGAATATCCGTTCGTTCCTGCCCATGAGGCGGTCTCGAAACAAA CACAAGCTTAA
Upstream 100 bases:
>100_bases GTCTTCGTTTTTAGAATCCATGATAAAGACAGCGTTTTCGAATGGGTCTATACTAGGGGTGTGAACAATTTGTGTCAACG GAATGAAAGGGGAATGTTCC
Downstream 100 bases:
>100_bases CCCTTAAGACGATGAGATGCACGTTCTCATCGTCTTTTCTCTATACCAAAAAGAAGGAATCGAACGCCATCGTCCGATTC CTTCTTTATTATGCGTTATG
Product: alanine dehydrogenase
Products: NA
Alternate protein names: Stage V sporulation protein N [H]
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MKIGVLKEIKNNENRVALTPMGAFMLTELGHDVFVETNAGLGSGFTNMEYIDAGATILETAKEVWEGVELALKVKEPQPS EYQYFRPDLTLFTYLHLAAEPELTKALVDSGITAIAYETVEVDRTLPLLTPMSEVAGRMAAQIGAQILEKPHGGKGILMS GLPGVPRANVTVIGGGVVGTNAARIAIGLGASVTLMDISPARLRQIDDLFGNTINTLISNKYNIAKQVAESDLVIGAVLI PGAKAPKLVTEEMVQRMSPGSVIVDVAIDQGGICETIDHITTHDAPTYERYGVQHYAVANMPGAVPRTSTMGLTNATMPY IIECAQKGVFPALLENEALLKGLNVINGTVTYEAVARDLEYPFVPAHEAVSKQTQA
Sequences:
>Translated_376_residues MKIGVLKEIKNNENRVALTPMGAFMLTELGHDVFVETNAGLGSGFTNMEYIDAGATILETAKEVWEGVELALKVKEPQPS EYQYFRPDLTLFTYLHLAAEPELTKALVDSGITAIAYETVEVDRTLPLLTPMSEVAGRMAAQIGAQILEKPHGGKGILMS GLPGVPRANVTVIGGGVVGTNAARIAIGLGASVTLMDISPARLRQIDDLFGNTINTLISNKYNIAKQVAESDLVIGAVLI PGAKAPKLVTEEMVQRMSPGSVIVDVAIDQGGICETIDHITTHDAPTYERYGVQHYAVANMPGAVPRTSTMGLTNATMPY IIECAQKGVFPALLENEALLKGLNVINGTVTYEAVARDLEYPFVPAHEAVSKQTQA >Mature_376_residues MKIGVLKEIKNNENRVALTPMGAFMLTELGHDVFVETNAGLGSGFTNMEYIDAGATILETAKEVWEGVELALKVKEPQPS EYQYFRPDLTLFTYLHLAAEPELTKALVDSGITAIAYETVEVDRTLPLLTPMSEVAGRMAAQIGAQILEKPHGGKGILMS GLPGVPRANVTVIGGGVVGTNAARIAIGLGASVTLMDISPARLRQIDDLFGNTINTLISNKYNIAKQVAESDLVIGAVLI PGAKAPKLVTEEMVQRMSPGSVIVDVAIDQGGICETIDHITTHDAPTYERYGVQHYAVANMPGAVPRTSTMGLTNATMPY IIECAQKGVFPALLENEALLKGLNVINGTVTYEAVARDLEYPFVPAHEAVSKQTQA
Specific function: This enzyme is a key factor in the assimilation of L- alanine as an energy source through the tricarboxylic acid cycle during sporulation [H]
COG id: COG0686
COG function: function code E; Alanine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=331, Percent_Identity=31.1178247734139, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI122939153, Length=331, Percent_Identity=31.1178247734139, Blast_Score=124, Evalue=2e-28, Organism=Escherichia coli, GI1787887, Length=379, Percent_Identity=31.6622691292876, Blast_Score=143, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17550456, Length=375, Percent_Identity=29.6, Blast_Score=143, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR008141 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.4.1.1 [H]
Molecular weight: Translated: 40172; Mature: 40172
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGVLKEIKNNENRVALTPMGAFMLTELGHDVFVETNAGLGSGFTNMEYIDAGATILET CCCCCHHHHCCCCCEEEEECCHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCHHHHHH AKEVWEGVELALKVKEPQPSEYQYFRPDLTLFTYLHLAAEPELTKALVDSGITAIAYETV HHHHHCCEEEEEEECCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEE EVDRTLPLLTPMSEVAGRMAAQIGAQILEKPHGGKGILMSGLPGVPRANVTVIGGGVVGT ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEECCEECC NAARIAIGLGASVTLMDISPARLRQIDDLFGNTINTLISNKYNIAKQVAESDLVIGAVLI CCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEEEE PGAKAPKLVTEEMVQRMSPGSVIVDVAIDQGGICETIDHITTHDAPTYERYGVQHYAVAN CCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHCCCEEEEEC MPGAVPRTSTMGLTNATMPYIIECAQKGVFPALLENEALLKGLNVINGTVTYEAVARDLE CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCEEEHHHHHHHCC YPFVPAHEAVSKQTQA CCCCCCHHHHHHHCCC >Mature Secondary Structure MKIGVLKEIKNNENRVALTPMGAFMLTELGHDVFVETNAGLGSGFTNMEYIDAGATILET CCCCCHHHHCCCCCEEEEECCHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCHHHHHH AKEVWEGVELALKVKEPQPSEYQYFRPDLTLFTYLHLAAEPELTKALVDSGITAIAYETV HHHHHCCEEEEEEECCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEE EVDRTLPLLTPMSEVAGRMAAQIGAQILEKPHGGKGILMSGLPGVPRANVTVIGGGVVGT ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEECCEECC NAARIAIGLGASVTLMDISPARLRQIDDLFGNTINTLISNKYNIAKQVAESDLVIGAVLI CCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEEEE PGAKAPKLVTEEMVQRMSPGSVIVDVAIDQGGICETIDHITTHDAPTYERYGVQHYAVAN CCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHCCCEEEEEC MPGAVPRTSTMGLTNATMPYIIECAQKGVFPALLENEALLKGLNVINGTVTYEAVARDLE CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCEEEHHHHHHHCC YPFVPAHEAVSKQTQA CCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226620; 9384377 [H]