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The map label for this gene is yukF [H]

Identifier: 229917751

GI number: 229917751

Start: 1981325

End: 1982548

Strand: Reverse

Name: yukF [H]

Synonym: EAT1b_2029

Alternate gene names: 229917751

Gene position: 1982548-1981325 (Counterclockwise)

Preceding gene: 229917752

Following gene: 229917750

Centisome position: 66.09

GC content: 52.53

Gene sequence:

>1224_bases
ATGCCTTTTTTGCAGAAATCTTACGAGTCACTCGATACACTCGCCGAAGCCATCGGACAAGCGATTCGAGCACCAATCAC
GATCGAGAACCGCCACCACCAATTGCTCGCCTATAGCACCCACCCCGATTCGACCGACCCGGCCAGGATTGCGACCATCA
TCGGGCGTCGTGTCCCAGAAGCCGTCATCGAAGATCTATGGGAGAGTGGCATTTTACAAGAAGTCATCGACCAAGATGAA
CCCGTCGTCATCCCGGCCCGTCTCGCCGTCGGTCTCGGGGAACGCGCAGCCATCGTCATCAAACAACATGATGAAGTACT
CGGCTATATTTGGAGCTTGGCTCGGACGAATCCGTTCAGCACTCAAGAACTAGCTATCCTGCAAGAAGGGGCAACCATCG
CCAAAAAATTACTGATGACCATTGCGATGCATGAGCGGCGAATCAGCGCCGAGCTCGAGCGCTTCTTATTAGATGTACTC
GCTTCCCCGACTCTCACGGATGCCAATCGCGAACGATTGAACGAGCTTGCCCCGATTGCTGTCGCCAGCCGTTTGACGGT
CATCGAATGTGCTCAACCGATCACCCCTCAACTTGCGGAACGCCTTCACTATGTGCTCGCGACGCAAGAGGCCATTGAAG
TCGTTTTACATGCCATCGACGGTCAACAGCTACTCGTCTGGCACTATATGAAGTCTGAACTCTCCGATGAAGAGACCGCA
CTCATTGCCTGGGCGGAACGATTCGAACAATTGCTTCAAGACAAGTTCAGCGAATCCGAACCACGCCTTGGCATCAGTCG
ACGTTTTTTCGAAAGTGACATGTTATATGCCGCAGCGGAAGAAGCGCGACGGGTGACCACGCTGCGTCGCAAGTTCCCGC
TCGAACTCTCGACTTCCCGTGCATTTGAGCAAATCGGCATTTATCAACTCGTCCCGGAACTCGCTCGGCGTATCGGGCTC
CGACTTGAGACCCATCCGACCGTCGAACGGTTGCAACATTATGACTCATCCCATCAGACCGAACTCGTGAAGACACTCGA
GTGGTATTTTTATTTTGATGGGAACGTCAAACGAGTCGCCGCCCATCTTCATATCCATCCGAATACCGTTCTGTATCGGA
TTCGCCGCATCGAAGAGTTGACGAATATCACGCAAGTTTCCTTACCCGAACGGTCCATGATTTATTTAGCCATTAAGGCT
GGTCAATATCGATTAGAAGACTAG

Upstream 100 bases:

>100_bases
CCAATGTAATGGAACAAGGTATGTCATTTCTCACACTCTTGATTCTTTTTGTGAAGTTTCACAAAGAAGAAGTTATACTC
AAGAGAGAGGAGGAATCGAC

Downstream 100 bases:

>100_bases
ACGTTTGCTTTGTGATTTTTCACAAAGTGAGCGTCTTCGTTTTTAGAATCCATGATAAAGACAGCGTTTTCGAATGGGTC
TATACTAGGGGTGTGAACAA

Product: PucR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MPFLQKSYESLDTLAEAIGQAIRAPITIENRHHQLLAYSTHPDSTDPARIATIIGRRVPEAVIEDLWESGILQEVIDQDE
PVVIPARLAVGLGERAAIVIKQHDEVLGYIWSLARTNPFSTQELAILQEGATIAKKLLMTIAMHERRISAELERFLLDVL
ASPTLTDANRERLNELAPIAVASRLTVIECAQPITPQLAERLHYVLATQEAIEVVLHAIDGQQLLVWHYMKSELSDEETA
LIAWAERFEQLLQDKFSESEPRLGISRRFFESDMLYAAAEEARRVTTLRRKFPLELSTSRAFEQIGIYQLVPELARRIGL
RLETHPTVERLQHYDSSHQTELVKTLEWYFYFDGNVKRVAAHLHIHPNTVLYRIRRIEELTNITQVSLPERSMIYLAIKA
GQYRLED

Sequences:

>Translated_407_residues
MPFLQKSYESLDTLAEAIGQAIRAPITIENRHHQLLAYSTHPDSTDPARIATIIGRRVPEAVIEDLWESGILQEVIDQDE
PVVIPARLAVGLGERAAIVIKQHDEVLGYIWSLARTNPFSTQELAILQEGATIAKKLLMTIAMHERRISAELERFLLDVL
ASPTLTDANRERLNELAPIAVASRLTVIECAQPITPQLAERLHYVLATQEAIEVVLHAIDGQQLLVWHYMKSELSDEETA
LIAWAERFEQLLQDKFSESEPRLGISRRFFESDMLYAAAEEARRVTTLRRKFPLELSTSRAFEQIGIYQLVPELARRIGL
RLETHPTVERLQHYDSSHQTELVKTLEWYFYFDGNVKRVAAHLHIHPNTVLYRIRRIEELTNITQVSLPERSMIYLAIKA
GQYRLED
>Mature_406_residues
PFLQKSYESLDTLAEAIGQAIRAPITIENRHHQLLAYSTHPDSTDPARIATIIGRRVPEAVIEDLWESGILQEVIDQDEP
VVIPARLAVGLGERAAIVIKQHDEVLGYIWSLARTNPFSTQELAILQEGATIAKKLLMTIAMHERRISAELERFLLDVLA
SPTLTDANRERLNELAPIAVASRLTVIECAQPITPQLAERLHYVLATQEAIEVVLHAIDGQQLLVWHYMKSELSDEETAL
IAWAERFEQLLQDKFSESEPRLGISRRFFESDMLYAAAEEARRVTTLRRKFPLELSTSRAFEQIGIYQLVPELARRIGLR
LETHPTVERLQHYDSSHQTELVKTLEWYFYFDGNVKRVAAHLHIHPNTVLYRIRRIEELTNITQVSLPERSMIYLAIKAG
QYRLED

Specific function: Unknown

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010312 [H]

Pfam domain/function: PF06018 CodY [H]

EC number: NA

Molecular weight: Translated: 46592; Mature: 46461

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFLQKSYESLDTLAEAIGQAIRAPITIENRHHQLLAYSTHPDSTDPARIATIIGRRVPE
CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCHH
AVIEDLWESGILQEVIDQDEPVVIPARLAVGLGERAAIVIKQHDEVLGYIWSLARTNPFS
HHHHHHHHCCHHHHHHCCCCCEEEEHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCCCCC
TQELAILQEGATIAKKLLMTIAMHERRISAELERFLLDVLASPTLTDANRERLNELAPIA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
VASRLTVIECAQPITPQLAERLHYVLATQEAIEVVLHAIDGQQLLVWHYMKSELSDEETA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCHHH
LIAWAERFEQLLQDKFSESEPRLGISRRFFESDMLYAAAEEARRVTTLRRKFPLELSTSR
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AFEQIGIYQLVPELARRIGLRLETHPTVERLQHYDSSHQTELVKTLEWYFYFDGNVKRVA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHEEEEEECCCCEEEE
AHLHIHPNTVLYRIRRIEELTNITQVSLPERSMIYLAIKAGQYRLED
EEEEECCHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEECCCEECCC
>Mature Secondary Structure 
PFLQKSYESLDTLAEAIGQAIRAPITIENRHHQLLAYSTHPDSTDPARIATIIGRRVPE
CCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCHH
AVIEDLWESGILQEVIDQDEPVVIPARLAVGLGERAAIVIKQHDEVLGYIWSLARTNPFS
HHHHHHHHCCHHHHHHCCCCCEEEEHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCCCCC
TQELAILQEGATIAKKLLMTIAMHERRISAELERFLLDVLASPTLTDANRERLNELAPIA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
VASRLTVIECAQPITPQLAERLHYVLATQEAIEVVLHAIDGQQLLVWHYMKSELSDEETA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCHHH
LIAWAERFEQLLQDKFSESEPRLGISRRFFESDMLYAAAEEARRVTTLRRKFPLELSTSR
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AFEQIGIYQLVPELARRIGLRLETHPTVERLQHYDSSHQTELVKTLEWYFYFDGNVKRVA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHEEEEEECCCCEEEE
AHLHIHPNTVLYRIRRIEELTNITQVSLPERSMIYLAIKAGQYRLED
EEEEECCHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEECCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9168598; 9384377 [H]