Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is yheG [H]
Identifier: 229917698
GI number: 229917698
Start: 1933579
End: 1934187
Strand: Reverse
Name: yheG [H]
Synonym: EAT1b_1975
Alternate gene names: 229917698
Gene position: 1934187-1933579 (Counterclockwise)
Preceding gene: 229917703
Following gene: 229917697
Centisome position: 64.48
GC content: 52.38
Gene sequence:
>609_bases ATGAAGTTATTCGTATTAGGCGCAACCGGTCGGACCGGACATCAATTCATCGATCAAGCCATCGAGCACGGTCATGACGT CACCGCGTTCGTACGTGAACAGAAAAAGTTGATTCGGACCCCACAACTTGAAATCATCGAAGGTGACTTATATGACATCG ATGCGTTAACAGAAGCGATGCACGGTCATGATGCGGTCATCAGCTGTCTCGGAACGGATTTGAGCGATCCGGACTTTTTA GCGAGTGTCACGGACAAGCTCGTCCCAGCGATGAAGACGAATGGCATCTCACGCGTCGTCTATTTGGCTTCAGCCGGGAT CGACAATGAGATCCCGGGACTTGCAGGAAAAGCCATTACGTTCATGCTCCGGAAGCCGCTCCGTGATCATCGGGCAGCCG TGGACTTGTGGCGAAATTCGTCATTCGATTATACGATTGTACGACCGATGCAATTGACGGACGGACCTCGCACTTCGACG TATCGCACGGCCATCGATGAAGTGCCAGAGAACGGGAAACACATCTCACGGGCAGACGTCGCCCAGTTCATGCTTCATGC GATTGAAGAACAGGAACACGTACGGGAGTCAGTCGGACTGGCGTACTAA
Upstream 100 bases:
>100_bases CGAGAAATGCAATAGGTTGCAATCAAACGGCGAAATGTTCGATTTTTCTGAAACTGCTGTATACTGTATGTATTGGATAT GAGAGAGGAGCCTTGCCCTT
Downstream 100 bases:
>100_bases TTTGATCCAATTCATGCTACAATATCGGGTAGTTTACTTTGAAAGGAACGAAAACGAATTATGAGTATATTAACGGTACA AAACTTGAGCCACGGCTTTG
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKLFVLGATGRTGHQFIDQAIEHGHDVTAFVREQKKLIRTPQLEIIEGDLYDIDALTEAMHGHDAVISCLGTDLSDPDFL ASVTDKLVPAMKTNGISRVVYLASAGIDNEIPGLAGKAITFMLRKPLRDHRAAVDLWRNSSFDYTIVRPMQLTDGPRTST YRTAIDEVPENGKHISRADVAQFMLHAIEEQEHVRESVGLAY
Sequences:
>Translated_202_residues MKLFVLGATGRTGHQFIDQAIEHGHDVTAFVREQKKLIRTPQLEIIEGDLYDIDALTEAMHGHDAVISCLGTDLSDPDFL ASVTDKLVPAMKTNGISRVVYLASAGIDNEIPGLAGKAITFMLRKPLRDHRAAVDLWRNSSFDYTIVRPMQLTDGPRTST YRTAIDEVPENGKHISRADVAQFMLHAIEEQEHVRESVGLAY >Mature_202_residues MKLFVLGATGRTGHQFIDQAIEHGHDVTAFVREQKKLIRTPQLEIIEGDLYDIDALTEAMHGHDAVISCLGTDLSDPDFL ASVTDKLVPAMKTNGISRVVYLASAGIDNEIPGLAGKAITFMLRKPLRDHRAAVDLWRNSSFDYTIVRPMQLTDGPRTST YRTAIDEVPENGKHISRADVAQFMLHAIEEQEHVRESVGLAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4502419, Length=206, Percent_Identity=29.126213592233, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI161078145, Length=207, Percent_Identity=25.6038647342995, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI24645509, Length=207, Percent_Identity=25.6038647342995, Blast_Score=77, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000534 [H]
Pfam domain/function: PF01118 Semialdhyde_dh [H]
EC number: NA
Molecular weight: Translated: 22425; Mature: 22425
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFVLGATGRTGHQFIDQAIEHGHDVTAFVREQKKLIRTPQLEIIEGDLYDIDALTEAM CEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH HGHDAVISCLGTDLSDPDFLASVTDKLVPAMKTNGISRVVYLASAGIDNEIPGLAGKAIT CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCHHHHHH FMLRKPLRDHRAAVDLWRNSSFDYTIVRPMQLTDGPRTSTYRTAIDEVPENGKHISRADV HHHHHHHHHHHHHHHHHCCCCCCEEEEECEEECCCCCCCHHHHHHHHCCCCCCCCCHHHH AQFMLHAIEEQEHVRESVGLAY HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKLFVLGATGRTGHQFIDQAIEHGHDVTAFVREQKKLIRTPQLEIIEGDLYDIDALTEAM CEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH HGHDAVISCLGTDLSDPDFLASVTDKLVPAMKTNGISRVVYLASAGIDNEIPGLAGKAIT CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCHHHHHH FMLRKPLRDHRAAVDLWRNSSFDYTIVRPMQLTDGPRTSTYRTAIDEVPENGKHISRADV HHHHHHHHHHHHHHHHHCCCCCCEEEEECEEECCCCCCCHHHHHHHHCCCCCCCCCHHHH AQFMLHAIEEQEHVRESVGLAY HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]