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The map label for this gene is ywdJ [H]

Identifier: 229917703

GI number: 229917703

Start: 1937469

End: 1938734

Strand: Reverse

Name: ywdJ [H]

Synonym: EAT1b_1980

Alternate gene names: 229917703

Gene position: 1938734-1937469 (Counterclockwise)

Preceding gene: 229917705

Following gene: 229917698

Centisome position: 64.63

GC content: 51.9

Gene sequence:

>1266_bases
ATGACCAGAAGTAATGTAACCACGACGATTCAGTGGTTTATTTTTATTTTAGCTACAAATATTGTACCACCACTCTCTAT
CGCCGCCTTGTTTGAACTGTCACCAGATGAGACGATGACCTTCATATCCCGCTCACTTTTCATCTTCGCACTCTTTAGCA
TCATCCAGACGTTGCTCGGTCATCGCCTCCCGATACTCGAAGGACCTGCCGGCATTTGGTGGGGTGTCTTCACCTTATAC
GCCTCCATCGGTCCCGCCCTATATGGAAGTCAGCAAGAGACGCTGCAGGCACTCGGATTCATGCTGTTTTTGAGCGGAAT
CCTTGGTGTGTTGTTGACTGTCACCGGCATCTTAAGACGCATGCTCGCCCTGTTTACACCGCAAGTGCTCGGCGTCTATA
TGATTTTGCTCGTCCTTCAATTGTCAGGGGCTGTCATTAAAGGTGGCTTTGGAGTGACGGAAGACGGAATCAATATTGTT
CAGGCCGTGGCGACGGCTGGGCTCGTCTTGTTCGCACTCACGCTCGAGCAAAGTCGCTTTAAACAATATGGACTCGTCAT
GACGCTATTCGTCGGGTTCGGCTTGTTCCATTTACTCGACCTTGGAAATCCAATCGTTCGTTCGGAATCCTTCTTCCTCG
TACCGGAACTTCTTCCGTTCGGAAATTGGGTGTGGGATTGGAACTTGTTGCCGACGGCTTTCGTCATTACCCTACTTCTC
ATGACGAACGTCCTTGCGAACATCAAGTTGATTGAGCGCATCGTCAGTTCTCGCGAAAAACGAGAAATCAAAGGAAACGT
TCCCGCATCGGGTGTCGCCAGTGGCGTCAGTCAAATCGTGGCTGGTCTGTTCGGTACACCGGGTCCTGTCGCCATCTCCG
GGACAGCTGGTTTCCTCTCTTCGACGGAGAGCGTCCAGCGTGCTCCGCATTTGGTTGCCCACGCCCTCATGATGGGGTTA
GCACTCATCGGTCCGTTCGTCTCGTTGATTGCGAGCATCCCCGCCGCTGTCGGTTATGCGATTGTGACTCCGCTTATCGC
GACGATGATCATCATCGGAATCAATGAGGCCGCCTTTGAATTAAAACAATCGACGGCATCCCTCACGGTCGGGCTCCCGC
TCGTCATCGGTGCCGGGGCGATGTTATTACCACCCGGTTCAATGAATGACCTGCCACCGCTTCTTGCGACCGTCTTCTCT
AACGGGCTTGTTCTCGGAACAATCGTCGCCTTAACGACTGCCATCTTAAGTAAAATCAAGGATTGA

Upstream 100 bases:

>100_bases
TGCGGTCCACTTGAAGAATTTCTTCATTATATAGCCTCCATTTGCATCCACTTCTTCATAACGTTACACTAATAAGAAAA
AGCATGATCAGGGGGACACC

Downstream 100 bases:

>100_bases
AAAAAAGAACTGGCCATATTGGTCAGTTCTTTTCACGTACATGCATATGGTAACGGGCATCGTGTGGTAACACGGCGCCG
TCTTCTTGTTCGAAATGTGC

Product: Xanthine/uracil/vitamin C permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MTRSNVTTTIQWFIFILATNIVPPLSIAALFELSPDETMTFISRSLFIFALFSIIQTLLGHRLPILEGPAGIWWGVFTLY
ASIGPALYGSQQETLQALGFMLFLSGILGVLLTVTGILRRMLALFTPQVLGVYMILLVLQLSGAVIKGGFGVTEDGINIV
QAVATAGLVLFALTLEQSRFKQYGLVMTLFVGFGLFHLLDLGNPIVRSESFFLVPELLPFGNWVWDWNLLPTAFVITLLL
MTNVLANIKLIERIVSSREKREIKGNVPASGVASGVSQIVAGLFGTPGPVAISGTAGFLSSTESVQRAPHLVAHALMMGL
ALIGPFVSLIASIPAAVGYAIVTPLIATMIIIGINEAAFELKQSTASLTVGLPLVIGAGAMLLPPGSMNDLPPLLATVFS
NGLVLGTIVALTTAILSKIKD

Sequences:

>Translated_421_residues
MTRSNVTTTIQWFIFILATNIVPPLSIAALFELSPDETMTFISRSLFIFALFSIIQTLLGHRLPILEGPAGIWWGVFTLY
ASIGPALYGSQQETLQALGFMLFLSGILGVLLTVTGILRRMLALFTPQVLGVYMILLVLQLSGAVIKGGFGVTEDGINIV
QAVATAGLVLFALTLEQSRFKQYGLVMTLFVGFGLFHLLDLGNPIVRSESFFLVPELLPFGNWVWDWNLLPTAFVITLLL
MTNVLANIKLIERIVSSREKREIKGNVPASGVASGVSQIVAGLFGTPGPVAISGTAGFLSSTESVQRAPHLVAHALMMGL
ALIGPFVSLIASIPAAVGYAIVTPLIATMIIIGINEAAFELKQSTASLTVGLPLVIGAGAMLLPPGSMNDLPPLLATVFS
NGLVLGTIVALTTAILSKIKD
>Mature_420_residues
TRSNVTTTIQWFIFILATNIVPPLSIAALFELSPDETMTFISRSLFIFALFSIIQTLLGHRLPILEGPAGIWWGVFTLYA
SIGPALYGSQQETLQALGFMLFLSGILGVLLTVTGILRRMLALFTPQVLGVYMILLVLQLSGAVIKGGFGVTEDGINIVQ
AVATAGLVLFALTLEQSRFKQYGLVMTLFVGFGLFHLLDLGNPIVRSESFFLVPELLPFGNWVWDWNLLPTAFVITLLLM
TNVLANIKLIERIVSSREKREIKGNVPASGVASGVSQIVAGLFGTPGPVAISGTAGFLSSTESVQRAPHLVAHALMMGLA
LIGPFVSLIASIPAAVGYAIVTPLIATMIIIGINEAAFELKQSTASLTVGLPLVIGAGAMLLPPGSMNDLPPLLATVFSN
GLVLGTIVALTTAILSKIKD

Specific function: Unknown

COG id: COG2233

COG function: function code F; Xanthine/uracil permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081750, Length=436, Percent_Identity=25.4587155963303, Blast_Score=111, Evalue=8e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006042
- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 44731; Mature: 44600

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSNVTTTIQWFIFILATNIVPPLSIAALFELSPDETMTFISRSLFIFALFSIIQTLLG
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
HRLPILEGPAGIWWGVFTLYASIGPALYGSQQETLQALGFMLFLSGILGVLLTVTGILRR
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLALFTPQVLGVYMILLVLQLSGAVIKGGFGVTEDGINIVQAVATAGLVLFALTLEQSRF
HHHHHCHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQYGLVMTLFVGFGLFHLLDLGNPIVRSESFFLVPELLPFGNWVWDWNLLPTAFVITLLL
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEECHHHCCCCCCEEECCCHHHHHHHHHHH
MTNVLANIKLIERIVSSREKREIKGNVPASGVASGVSQIVAGLFGTPGPVAISGTAGFLS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHH
STESVQRAPHLVAHALMMGLALIGPFVSLIASIPAAVGYAIVTPLIATMIIIGINEAAFE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LKQSTASLTVGLPLVIGAGAMLLPPGSMNDLPPLLATVFSNGLVLGTIVALTTAILSKIK
HHHHHHHHHCCHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
D
C
>Mature Secondary Structure 
TRSNVTTTIQWFIFILATNIVPPLSIAALFELSPDETMTFISRSLFIFALFSIIQTLLG
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
HRLPILEGPAGIWWGVFTLYASIGPALYGSQQETLQALGFMLFLSGILGVLLTVTGILRR
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLALFTPQVLGVYMILLVLQLSGAVIKGGFGVTEDGINIVQAVATAGLVLFALTLEQSRF
HHHHHCHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQYGLVMTLFVGFGLFHLLDLGNPIVRSESFFLVPELLPFGNWVWDWNLLPTAFVITLLL
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEECHHHCCCCCCEEECCCHHHHHHHHHHH
MTNVLANIKLIERIVSSREKREIKGNVPASGVASGVSQIVAGLFGTPGPVAISGTAGFLS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHH
STESVQRAPHLVAHALMMGLALIGPFVSLIASIPAAVGYAIVTPLIATMIIIGINEAAFE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LKQSTASLTVGLPLVIGAGAMLLPPGSMNDLPPLLATVFSNGLVLGTIVALTTAILSKIK
HHHHHHHHHCCHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]