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The map label for this gene is ldcA [C]

Identifier: 229917673

GI number: 229917673

Start: 1910252

End: 1911259

Strand: Reverse

Name: ldcA [C]

Synonym: EAT1b_1950

Alternate gene names: 229917673

Gene position: 1911259-1910252 (Counterclockwise)

Preceding gene: 229917674

Following gene: 229917671

Centisome position: 63.71

GC content: 49.7

Gene sequence:

>1008_bases
ATGATTCGTTATCCACAGTTAACCGGTCATCAAATCGGTGTCACCGCCCCTTCATCAGGTATACCAGAAGAGTTACACCA
TTTATTGCATCAAGCGGAACAGAAGTTTTCCGATCGAGGGTTCACATTGCAATTCACTCCGAATGCGTGGAAACAACGAT
TTGGGAAGTCCGCTCCGGCTCGGGTCCGTGCACATGAACTGACATCCCTATTTCAAGATGACAATGTCGACTTGATCATT
CCACCCTGGGGTGGGGAACTCTTAATGGAAATCCTCGATCAAATCGAGTGGCAGTCCTTGCCCGCAAAATGGATGCTCGG
CTATTCAGATACGAGTCTATTGCTTTTTGTGTATACGCTAAAAACTGGAATCGCCTCGGCCCACGGTCCAAACTTAGTCG
ACTTACGTGCTGATTTGTGGGACGAGACGAGTTCACGCTGGCTCGATGTGTTGTCGACGCGGACCGACGAGACGGTCATC
CAACGTTCGTCCGAGAAGTTCCAAAACGAATGGCAGTTTGACAACCCGACGCCACATCTGTTTCATCTGACGGAAACGAC
CGAATGGAGAGCGATTGGCGGTCAGAATGCAACAGGACGCTTGCTCGGTGGATGCCTCGATGTGCTCTTACATACAATCG
GGACACCATATGGAGACGTCAAGACGTTCCAGCGCGAACATCTGAATGACGAGCCGATTCTTTGGTATTTTGAAAATGCT
GAGCTAAACGTTCCGGCATTAAAAAGGACCCTCCTTCAAATGAAGTGGGCCGGTTGGTTCGATCATACGTCTGGTATTCT
GTTCGGACGGAGTGACGCCCCATCTATCCATCAAGACTATACGGCCGAGATGGTGTATGAGGAACTCCATCACATGTTAG
AGGTTCCGATTTTTTACGATATCGACTGTGGACACGTTCCGCCTCAAATGACGCTCGTCAATGGAGCACACGCATCCGTC
CAAGTCGAGCATGGCAAAGGGACATTGATTCAAACGTTCAAGGGCTGA

Upstream 100 bases:

>100_bases
GGGAATGCGTCATGCCGAACGGATGCGCTCTAATTAGTTGTCCACATGTGGATAACCCATTTTCCCTACTGAACATATCA
CTTATCCACAGGAGGTTGTC

Downstream 100 bases:

>100_bases
TTCGTCAGCCCTTGATTTGTTGTAGCAATGTCTCTAAACGTTTGCGAAACAGTCCTTGCGGGAATTCAGCTACTTGTTCT
TCGATAACTGGCACCCAATC

Product: peptidase U61 LD-carboxypeptidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MIRYPQLTGHQIGVTAPSSGIPEELHHLLHQAEQKFSDRGFTLQFTPNAWKQRFGKSAPARVRAHELTSLFQDDNVDLII
PPWGGELLMEILDQIEWQSLPAKWMLGYSDTSLLLFVYTLKTGIASAHGPNLVDLRADLWDETSSRWLDVLSTRTDETVI
QRSSEKFQNEWQFDNPTPHLFHLTETTEWRAIGGQNATGRLLGGCLDVLLHTIGTPYGDVKTFQREHLNDEPILWYFENA
ELNVPALKRTLLQMKWAGWFDHTSGILFGRSDAPSIHQDYTAEMVYEELHHMLEVPIFYDIDCGHVPPQMTLVNGAHASV
QVEHGKGTLIQTFKG

Sequences:

>Translated_335_residues
MIRYPQLTGHQIGVTAPSSGIPEELHHLLHQAEQKFSDRGFTLQFTPNAWKQRFGKSAPARVRAHELTSLFQDDNVDLII
PPWGGELLMEILDQIEWQSLPAKWMLGYSDTSLLLFVYTLKTGIASAHGPNLVDLRADLWDETSSRWLDVLSTRTDETVI
QRSSEKFQNEWQFDNPTPHLFHLTETTEWRAIGGQNATGRLLGGCLDVLLHTIGTPYGDVKTFQREHLNDEPILWYFENA
ELNVPALKRTLLQMKWAGWFDHTSGILFGRSDAPSIHQDYTAEMVYEELHHMLEVPIFYDIDCGHVPPQMTLVNGAHASV
QVEHGKGTLIQTFKG
>Mature_335_residues
MIRYPQLTGHQIGVTAPSSGIPEELHHLLHQAEQKFSDRGFTLQFTPNAWKQRFGKSAPARVRAHELTSLFQDDNVDLII
PPWGGELLMEILDQIEWQSLPAKWMLGYSDTSLLLFVYTLKTGIASAHGPNLVDLRADLWDETSSRWLDVLSTRTDETVI
QRSSEKFQNEWQFDNPTPHLFHLTETTEWRAIGGQNATGRLLGGCLDVLLHTIGTPYGDVKTFQREHLNDEPILWYFENA
ELNVPALKRTLLQMKWAGWFDHTSGILFGRSDAPSIHQDYTAEMVYEELHHMLEVPIFYDIDCGHVPPQMTLVNGAHASV
QVEHGKGTLIQTFKG

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 38107; Mature: 38107

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRYPQLTGHQIGVTAPSSGIPEELHHLLHQAEQKFSDRGFTLQFTPNAWKQRFGKSAPA
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCC
RVRAHELTSLFQDDNVDLIIPPWGGELLMEILDQIEWQSLPAKWMLGYSDTSLLLFVYTL
HHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHHH
KTGIASAHGPNLVDLRADLWDETSSRWLDVLSTRTDETVIQRSSEKFQNEWQFDNPTPHL
HHHHCCCCCCCEEEEEHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCE
FHLTETTEWRAIGGQNATGRLLGGCLDVLLHTIGTPYGDVKTFQREHLNDEPILWYFENA
EEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCC
ELNVPALKRTLLQMKWAGWFDHTSGILFGRSDAPSIHQDYTAEMVYEELHHMLEVPIFYD
CCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE
IDCGHVPPQMTLVNGAHASVQVEHGKGTLIQTFKG
CCCCCCCCCEEEEECCCEEEEEECCCCCEEEECCC
>Mature Secondary Structure
MIRYPQLTGHQIGVTAPSSGIPEELHHLLHQAEQKFSDRGFTLQFTPNAWKQRFGKSAPA
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCC
RVRAHELTSLFQDDNVDLIIPPWGGELLMEILDQIEWQSLPAKWMLGYSDTSLLLFVYTL
HHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHHH
KTGIASAHGPNLVDLRADLWDETSSRWLDVLSTRTDETVIQRSSEKFQNEWQFDNPTPHL
HHHHCCCCCCCEEEEEHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCE
FHLTETTEWRAIGGQNATGRLLGGCLDVLLHTIGTPYGDVKTFQREHLNDEPILWYFENA
EEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCC
ELNVPALKRTLLQMKWAGWFDHTSGILFGRSDAPSIHQDYTAEMVYEELHHMLEVPIFYD
CCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE
IDCGHVPPQMTLVNGAHASVQVEHGKGTLIQTFKG
CCCCCCCCCEEEEECCCEEEEEECCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]