Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229917660
Identifier: 229917660
GI number: 229917660
Start: 1897988
End: 1898434
Strand: Reverse
Name: 229917660
Synonym: EAT1b_1937
Alternate gene names: NA
Gene position: 1898434-1897988 (Counterclockwise)
Preceding gene: 229917661
Following gene: 229917656
Centisome position: 63.28
GC content: 45.41
Gene sequence:
>447_bases ATGAGGACTCAACTTTCATCACCTCTCGCCAGTCAAGTAAAAAGAAGAATTCGCGCCATTTGGGGTGTGACCGATTCACA CTATTGGTACCCTCTATCGACTGCTGGGCGCCCCGATGTGATCGCATTCGATAGTGACTATATTGAAGAGGATGATCAAA AAATTAAGGAAATCCAACAATGGATATCGCGTCGAGGCGCGGATGTCGTCTTTGAACTACATGAGGACCTTACGCTCTGG CAAATCGATACCGATTCCTTGGATCCTTGTTATGACGGACGTTATCTAGAACGTTATTGGTTTGACCAACACATGAACTG GGTCATTTACGCATCTCACGAAAGTACGATTAGCTTTGGGGGGAACGAATTGATTACATCGCTCCAGTCCTCTTGGCCAG ATTGGCAGGAACATCTATCTGTTATAGACCATCGCTTCATTGAATGA
Upstream 100 bases:
>100_bases GAAACGTCCTTAGATAAACGCTAAGGACGTTTTTCTATTTCCCATGTATAGTGAAGATAGCAACACATACATCAACTTTA GGATAAGGAGTTTACACGTC
Downstream 100 bases:
>100_bases TGGACCCACAAAAAAACGCACCCATTCATCAATGAGTGCGCGGAACTTATACGAAGCAAGGAATTTGCGGGTTGAACGTC TTGTTGTTCTCCGTCATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MRTQLSSPLASQVKRRIRAIWGVTDSHYWYPLSTAGRPDVIAFDSDYIEEDDQKIKEIQQWISRRGADVVFELHEDLTLW QIDTDSLDPCYDGRYLERYWFDQHMNWVIYASHESTISFGGNELITSLQSSWPDWQEHLSVIDHRFIE
Sequences:
>Translated_148_residues MRTQLSSPLASQVKRRIRAIWGVTDSHYWYPLSTAGRPDVIAFDSDYIEEDDQKIKEIQQWISRRGADVVFELHEDLTLW QIDTDSLDPCYDGRYLERYWFDQHMNWVIYASHESTISFGGNELITSLQSSWPDWQEHLSVIDHRFIE >Mature_148_residues MRTQLSSPLASQVKRRIRAIWGVTDSHYWYPLSTAGRPDVIAFDSDYIEEDDQKIKEIQQWISRRGADVVFELHEDLTLW QIDTDSLDPCYDGRYLERYWFDQHMNWVIYASHESTISFGGNELITSLQSSWPDWQEHLSVIDHRFIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17598; Mature: 17598
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTQLSSPLASQVKRRIRAIWGVTDSHYWYPLSTAGRPDVIAFDSDYIEEDDQKIKEIQQ CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCHHHCCHHHHHHHHHH WISRRGADVVFELHEDLTLWQIDTDSLDPCYDGRYLERYWFDQHMNWVIYASHESTISFG HHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCEEECC GNELITSLQSSWPDWQEHLSVIDHRFIE HHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRTQLSSPLASQVKRRIRAIWGVTDSHYWYPLSTAGRPDVIAFDSDYIEEDDQKIKEIQQ CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCHHHCCHHHHHHHHHH WISRRGADVVFELHEDLTLWQIDTDSLDPCYDGRYLERYWFDQHMNWVIYASHESTISFG HHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCEEECC GNELITSLQSSWPDWQEHLSVIDHRFIE HHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA