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The map label for this gene is ylxY [H]

Identifier: 229917646

GI number: 229917646

Start: 1881880

End: 1883070

Strand: Reverse

Name: ylxY [H]

Synonym: EAT1b_1923

Alternate gene names: 229917646

Gene position: 1883070-1881880 (Counterclockwise)

Preceding gene: 229917648

Following gene: 229917645

Centisome position: 62.77

GC content: 47.61

Gene sequence:

>1191_bases
ATGAAACGTAAGGTCATTCGTGGGGCGATGGCACTGTTCATCTTATTGGCGATGGTGATCACACAATCGATTTCCGTCAG
TGCCGCCGCTTCAAAATTTGTCACGAGCGTGAACACGACGAGCAAGGTCGTCGCATTGACGTTCGATGACGGGGCAGACG
GGGCGAACACGAACAAGATTTTAGACATTTTAGCAAAAAACAATGTCAAAGCCACTTTCTTTTTAACGGGGTCGGGCGCA
AATAACCATCCACAGTACATTAAAAATATCGCCGCAAAAGGACATCAACTCGGAAATCACTCTTATACACACCCTGACTT
CACCAAACTGACTGCCACGCAGATGAAATCCGAACTCGACCGCACGGAAGCTTTGATTAAATCGTTGACCGGAAAAACGA
CAAAACCGATTTTCAGAGCCCCGTTTGGTGCAGTGAATAGTACCGTATTGAACGGTGTCGGGGCTGCAGGATACGGATAC
ACGATTCAATGGAACATTGATACGATTGACTGGAAAGGGTTGACCGCGAGCCAAATCAACACGAAAGTTCAGACTAACAT
CAAACCGGGTTCAATCGTCTTGATGCATACCGGAGCCGGAGCCCCGGGTACACCGCTCGCACTCCCAACGATGATTTCAC
AACTCAAAGCAAAAGGGTACAAATTTGTCACGGTCTCACAATTACTTGCATATCAAAACACATCGACGAACAAAACGTAT
ACCGTGAAGTCAGGTGATACGTTGTACAGTATCGCACGGACATACGGAGTCACCGTCTCGGCGCTTGCTGCCGCCAACAA
CATTACGAACTACAGCTTGATTTATGTAGGACAAGTGCTCATCATTCCAGGAACGACCGTTACACCACCTACGACGACCG
TGAAATACACCGTGAAATCGGGCGACACACTCTACAAGATTGCGACGATGTACAATACGACCGTCGCAAAAATCGCAGCC
GCCAATAACATCACAAACGTCAACTCCATCTATGTCGGACAAGTGCTCATCATTCCAACTACGACCGTTACACCACCTAC
GACGACTGTGAAATATACGGTGAAATCGGGCGACACACTCTACAAGATTGCAACGATGTACAATACGACCGTCGCAAAAA
TCGCAGCCGCCAATAACATCACAAACGTCAACTCCATCTATGTCGGACAAGTGTTGACCATTCCGAAATGA

Upstream 100 bases:

>100_bases
TCCATCATTTCTAAAAAGGGGTATATAAAATATATCAAGGTCAATCATTTGGAAAGTCTTAACATCAAGAGAGTTACATC
ATGAATGGAGGCGAATTCAG

Downstream 100 bases:

>100_bases
TTGCCTCGTGAATCTTTTCCTCAGCTTGTGACGTATCGTATACAAACAGGAAAAGAGGAAACGCTATGACTCGAACCGTA
ATCCGTGTCAGTACTACCGC

Product: polysaccharide deacetylase

Products: 1,6-Anhydrobond In The Muramic Acid Residue [C]

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MKRKVIRGAMALFILLAMVITQSISVSAAASKFVTSVNTTSKVVALTFDDGADGANTNKILDILAKNNVKATFFLTGSGA
NNHPQYIKNIAAKGHQLGNHSYTHPDFTKLTATQMKSELDRTEALIKSLTGKTTKPIFRAPFGAVNSTVLNGVGAAGYGY
TIQWNIDTIDWKGLTASQINTKVQTNIKPGSIVLMHTGAGAPGTPLALPTMISQLKAKGYKFVTVSQLLAYQNTSTNKTY
TVKSGDTLYSIARTYGVTVSALAAANNITNYSLIYVGQVLIIPGTTVTPPTTTVKYTVKSGDTLYKIATMYNTTVAKIAA
ANNITNVNSIYVGQVLIIPTTTVTPPTTTVKYTVKSGDTLYKIATMYNTTVAKIAAANNITNVNSIYVGQVLTIPK

Sequences:

>Translated_396_residues
MKRKVIRGAMALFILLAMVITQSISVSAAASKFVTSVNTTSKVVALTFDDGADGANTNKILDILAKNNVKATFFLTGSGA
NNHPQYIKNIAAKGHQLGNHSYTHPDFTKLTATQMKSELDRTEALIKSLTGKTTKPIFRAPFGAVNSTVLNGVGAAGYGY
TIQWNIDTIDWKGLTASQINTKVQTNIKPGSIVLMHTGAGAPGTPLALPTMISQLKAKGYKFVTVSQLLAYQNTSTNKTY
TVKSGDTLYSIARTYGVTVSALAAANNITNYSLIYVGQVLIIPGTTVTPPTTTVKYTVKSGDTLYKIATMYNTTVAKIAA
ANNITNVNSIYVGQVLIIPTTTVTPPTTTVKYTVKSGDTLYKIATMYNTTVAKIAAANNITNVNSIYVGQVLTIPK
>Mature_396_residues
MKRKVIRGAMALFILLAMVITQSISVSAAASKFVTSVNTTSKVVALTFDDGADGANTNKILDILAKNNVKATFFLTGSGA
NNHPQYIKNIAAKGHQLGNHSYTHPDFTKLTATQMKSELDRTEALIKSLTGKTTKPIFRAPFGAVNSTVLNGVGAAGYGY
TIQWNIDTIDWKGLTASQINTKVQTNIKPGSIVLMHTGAGAPGTPLALPTMISQLKAKGYKFVTVSQLLAYQNTSTNKTY
TVKSGDTLYSIARTYGVTVSALAAANNITNYSLIYVGQVLIIPGTTVTPPTTTVKYTVKSGDTLYKIATMYNTTVAKIAA
ANNITNVNSIYVGQVLIIPTTTVTPPTTTVKYTVKSGDTLYKIATMYNTTVAKIAAANNITNVNSIYVGQVLTIPK

Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=168, Percent_Identity=27.3809523809524, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014228
- InterPro:   IPR010916 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 42145; Mature: 42145

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKVIRGAMALFILLAMVITQSISVSAAASKFVTSVNTTSKVVALTFDDGADGANTNKI
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHH
LDILAKNNVKATFFLTGSGANNHPQYIKNIAAKGHQLGNHSYTHPDFTKLTATQMKSELD
EEEEECCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RTEALIKSLTGKTTKPIFRAPFGAVNSTVLNGVGAAGYGYTIQWNIDTIDWKGLTASQIN
HHHHHHHHHCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCHHHCC
TKVQTNIKPGSIVLMHTGAGAPGTPLALPTMISQLKAKGYKFVTVSQLLAYQNTSTNKTY
CEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCEEEEEHHHHHHHCCCCCCEEE
TVKSGDTLYSIARTYGVTVSALAAANNITNYSLIYVGQVLIIPGTTVTPPTTTVKYTVKS
EEECCCHHHHHHHHHCCEEEEHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEECC
GDTLYKIATMYNTTVAKIAAANNITNVNSIYVGQVLIIPTTTVTPPTTTVKYTVKSGDTL
CCEEEEEEEHHCCHHHHEECCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCEE
YKIATMYNTTVAKIAAANNITNVNSIYVGQVLTIPK
EEEEEHHCCHHHHEECCCCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MKRKVIRGAMALFILLAMVITQSISVSAAASKFVTSVNTTSKVVALTFDDGADGANTNKI
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHH
LDILAKNNVKATFFLTGSGANNHPQYIKNIAAKGHQLGNHSYTHPDFTKLTATQMKSELD
EEEEECCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RTEALIKSLTGKTTKPIFRAPFGAVNSTVLNGVGAAGYGYTIQWNIDTIDWKGLTASQIN
HHHHHHHHHCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCHHHCC
TKVQTNIKPGSIVLMHTGAGAPGTPLALPTMISQLKAKGYKFVTVSQLLAYQNTSTNKTY
CEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCEEEEEHHHHHHHCCCCCCEEE
TVKSGDTLYSIARTYGVTVSALAAANNITNYSLIYVGQVLIIPGTTVTPPTTTVKYTVKS
EEECCCHHHHHHHHHCCEEEEHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEECC
GDTLYKIATMYNTTVAKIAAANNITNVNSIYVGQVLIIPTTTVTPPTTTVKYTVKSGDTL
CCEEEEEEEHHCCHHHHEECCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCEE
YKIATMYNTTVAKIAAANNITNVNSIYVGQVLTIPK
EEEEEHHCCHHHHEECCCCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 8825779 [H]