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The map label for this gene is ykpA [H]

Identifier: 229917648

GI number: 229917648

Start: 1884117

End: 1885742

Strand: Reverse

Name: ykpA [H]

Synonym: EAT1b_1925

Alternate gene names: 229917648

Gene position: 1885742-1884117 (Counterclockwise)

Preceding gene: 229917649

Following gene: 229917646

Centisome position: 62.86

GC content: 48.71

Gene sequence:

>1626_bases
ATGATTACAGTAAATAACGTCAGCCTACAATTTGGCGGTCGCAAGTTGTTCGAAGAGGTGAACATCAAGTTCACGCCAGG
CAACTGTTACGGATTGATCGGTGCGAACGGTGCCGGTAAATCGACATTCTTAAAGATTTTATCAGGTGAGCAAGATACGA
CGACTGGTGATGTCAGCATCACACCAGGCGAACGTCTCGCTGTCCTCAAGCAGGACCACTACGCGTATGAAGACAGTGCG
GTTCTCGAGACCGTCATTATGGGTCACGAGCGTCTCTACAAAGTAATGAAGGAAAAAGACGCCATCTATATGAAAGAAGA
CTTCTCAGATGAAGACGGCATGCGCGCAGCTGAACTCGAAGGTGAATTCGCTGAGTTGAACGGTTGGGAAGCCGAGTCAG
AAGCGTCGATGGTCCTTCAAGGTCTCGGAATCTCTGAAGCGCTCCACCAGAAACAAATGAGCGAACTCACAGGTGGGGAG
AAAGTCAAAGTCCTTCTTGCCCAAGCGCTCTTCGGTAAGCCAGATATCCTCCTCTTAGACGAGCCGACCAACGGACTTGA
CCTAAAAGCGATTCAATGGTTAGAAGAATTCTTAATCAACTTTGAAAACACAGTCATCGTCGTTTCCCACGACCGTCACT
TCTTGAACAAAGTCTGTACGCACATGGCCGACCTCGACTTTGGAAAAATCCAATTGTATGTTGGGAACTACGACTTCTGG
TATGAGTCTAGCCAACTCGCTACACGTATGGCGGCAGACCAGAACAAGAAGAAAGAAGAGAAAATCAAAGAGCTTCAAAA
CTTCATCGCACGTTTCAGCTCGAACGCATCGAAAGCACGTCAAGCGACGTCTCGTAAGAAGTTGCTCGATAAGATCACAC
TTGATGACATCCGTCCGTCGTCACGTCGTTATCCGTTCGTCGGATTCACGATGGAGCGCGAGATCGGAAACGATGTTCTC
TATGTCGATAACGTATCGAAGACAATCGATGGTGTAAAAGTACTCGACAACGTCACGTTCTCACTCAACAAGACGGACAA
AGTCGCATTCGTCGGTCGTTCGGACGTTGCCATCACGACACTCTTCAAAATTCTCATGGGTGAGATGGAGCCAGACACAG
GATCAGTCAAATGGGGCGTCACGACAACTCAGTCATACTTCCCGAAAGACAATTCGGAGTACTTCGAGGGCTCAGAAAAG
AGCATCCTCGACTGGTTGCGCCAGTTCTCACCTGCCGATGAGTCAGACACGTTCCTTCGTGGATTCCTTGGCCGCATGCT
CTTCTCAGGTGAAGAAGTCATGAAGAAGGCGTCTGTCCTCTCAGGAGGAGAAAAAGTACGCTGCATGCTCTCGAAGATGA
TGCTTTCAAATTCGAACGTGCTCGTCCTCGACGATCCGACGAACCACTTGGACCTCGAATCAATCACGGCACTCAACAAC
GGTCTCGAGTCGTTCAAAGGCGTACTCCTCTTCAGCTCACATGACCATCAGCTCATCTCGACGATTGCGACACGCATCAT
TGAAGTGACACCGAATGGCATCGTGGATAAAGAAGCAACATACGATGAGTACTTGGAGAACGAGGCGCTTCAACAACAAG
TTGAATCCCTTTACCAAAATGCATAA

Upstream 100 bases:

>100_bases
GAGTCATTTTTCACTTCCACTTTTTACGCGACTGCGCGATTTTCAAAAACGTGATACAATACACGTCGTAAACTAATCAG
AAAAACGAGGGATACCATAC

Downstream 100 bases:

>100_bases
TAAAAAATCGGCTCAAACGCGAGCCGATTTTTTATTTAACGTTTACCGTTTCCATCACGTGCTCATGAATGTCATGACCT
TTCGTGACATGGACTTGAAC

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MITVNNVSLQFGGRKLFEEVNIKFTPGNCYGLIGANGAGKSTFLKILSGEQDTTTGDVSITPGERLAVLKQDHYAYEDSA
VLETVIMGHERLYKVMKEKDAIYMKEDFSDEDGMRAAELEGEFAELNGWEAESEASMVLQGLGISEALHQKQMSELTGGE
KVKVLLAQALFGKPDILLLDEPTNGLDLKAIQWLEEFLINFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
YESSQLATRMAADQNKKKEEKIKELQNFIARFSSNASKARQATSRKKLLDKITLDDIRPSSRRYPFVGFTMEREIGNDVL
YVDNVSKTIDGVKVLDNVTFSLNKTDKVAFVGRSDVAITTLFKILMGEMEPDTGSVKWGVTTTQSYFPKDNSEYFEGSEK
SILDWLRQFSPADESDTFLRGFLGRMLFSGEEVMKKASVLSGGEKVRCMLSKMMLSNSNVLVLDDPTNHLDLESITALNN
GLESFKGVLLFSSHDHQLISTIATRIIEVTPNGIVDKEATYDEYLENEALQQQVESLYQNA

Sequences:

>Translated_541_residues
MITVNNVSLQFGGRKLFEEVNIKFTPGNCYGLIGANGAGKSTFLKILSGEQDTTTGDVSITPGERLAVLKQDHYAYEDSA
VLETVIMGHERLYKVMKEKDAIYMKEDFSDEDGMRAAELEGEFAELNGWEAESEASMVLQGLGISEALHQKQMSELTGGE
KVKVLLAQALFGKPDILLLDEPTNGLDLKAIQWLEEFLINFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
YESSQLATRMAADQNKKKEEKIKELQNFIARFSSNASKARQATSRKKLLDKITLDDIRPSSRRYPFVGFTMEREIGNDVL
YVDNVSKTIDGVKVLDNVTFSLNKTDKVAFVGRSDVAITTLFKILMGEMEPDTGSVKWGVTTTQSYFPKDNSEYFEGSEK
SILDWLRQFSPADESDTFLRGFLGRMLFSGEEVMKKASVLSGGEKVRCMLSKMMLSNSNVLVLDDPTNHLDLESITALNN
GLESFKGVLLFSSHDHQLISTIATRIIEVTPNGIVDKEATYDEYLENEALQQQVESLYQNA
>Mature_541_residues
MITVNNVSLQFGGRKLFEEVNIKFTPGNCYGLIGANGAGKSTFLKILSGEQDTTTGDVSITPGERLAVLKQDHYAYEDSA
VLETVIMGHERLYKVMKEKDAIYMKEDFSDEDGMRAAELEGEFAELNGWEAESEASMVLQGLGISEALHQKQMSELTGGE
KVKVLLAQALFGKPDILLLDEPTNGLDLKAIQWLEEFLINFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
YESSQLATRMAADQNKKKEEKIKELQNFIARFSSNASKARQATSRKKLLDKITLDDIRPSSRRYPFVGFTMEREIGNDVL
YVDNVSKTIDGVKVLDNVTFSLNKTDKVAFVGRSDVAITTLFKILMGEMEPDTGSVKWGVTTTQSYFPKDNSEYFEGSEK
SILDWLRQFSPADESDTFLRGFLGRMLFSGEEVMKKASVLSGGEKVRCMLSKMMLSNSNVLVLDDPTNHLDLESITALNN
GLESFKGVLLFSSHDHQLISTIATRIIEVTPNGIVDKEATYDEYLENEALQQQVESLYQNA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=541, Percent_Identity=29.9445471349353, Blast_Score=256, Evalue=5e-68,
Organism=Homo sapiens, GI10947137, Length=516, Percent_Identity=32.5581395348837, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI27881506, Length=516, Percent_Identity=32.5581395348837, Blast_Score=239, Evalue=6e-63,
Organism=Homo sapiens, GI10947135, Length=546, Percent_Identity=27.2893772893773, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI69354671, Length=546, Percent_Identity=27.2893772893773, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI47078218, Length=243, Percent_Identity=26.3374485596708, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI45446740, Length=243, Percent_Identity=26.3374485596708, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI105990541, Length=213, Percent_Identity=29.5774647887324, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI21536376, Length=221, Percent_Identity=27.6018099547511, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI30795238, Length=237, Percent_Identity=28.6919831223629, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI27881501, Length=237, Percent_Identity=28.6919831223629, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI116734710, Length=250, Percent_Identity=25.6, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1787041, Length=532, Percent_Identity=45.8646616541353, Blast_Score=522, Evalue=1e-149,
Organism=Escherichia coli, GI1789751, Length=504, Percent_Identity=33.531746031746, Blast_Score=278, Evalue=5e-76,
Organism=Escherichia coli, GI2367384, Length=525, Percent_Identity=30.2857142857143, Blast_Score=236, Evalue=4e-63,
Organism=Escherichia coli, GI1787182, Length=520, Percent_Identity=29.4230769230769, Blast_Score=219, Evalue=3e-58,
Organism=Escherichia coli, GI1789864, Length=222, Percent_Identity=26.5765765765766, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786398, Length=240, Percent_Identity=26.25, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788225, Length=274, Percent_Identity=24.0875912408759, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1789891, Length=227, Percent_Identity=22.4669603524229, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786319, Length=231, Percent_Identity=22.5108225108225, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI87082268, Length=198, Percent_Identity=25.7575757575758, Blast_Score=66, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17553372, Length=538, Percent_Identity=29.9256505576208, Blast_Score=228, Evalue=8e-60,
Organism=Caenorhabditis elegans, GI17555318, Length=546, Percent_Identity=27.2893772893773, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17559834, Length=543, Percent_Identity=27.4401473296501, Blast_Score=202, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI17565586, Length=235, Percent_Identity=25.9574468085106, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17565938, Length=216, Percent_Identity=25.462962962963, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=218, Percent_Identity=29.3577981651376, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=525, Percent_Identity=33.5238095238095, Blast_Score=254, Evalue=2e-68,
Organism=Saccharomyces cerevisiae, GI6321121, Length=545, Percent_Identity=30.0917431192661, Blast_Score=223, Evalue=5e-59,
Organism=Saccharomyces cerevisiae, GI6325030, Length=428, Percent_Identity=26.6355140186916, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6324314, Length=380, Percent_Identity=24.7368421052632, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6323278, Length=370, Percent_Identity=22.1621621621622, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24666836, Length=533, Percent_Identity=29.8311444652908, Blast_Score=245, Evalue=5e-65,
Organism=Drosophila melanogaster, GI24642252, Length=549, Percent_Identity=29.5081967213115, Blast_Score=237, Evalue=2e-62,
Organism=Drosophila melanogaster, GI18859989, Length=549, Percent_Identity=29.5081967213115, Blast_Score=237, Evalue=2e-62,
Organism=Drosophila melanogaster, GI24641342, Length=537, Percent_Identity=29.7951582867784, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24643674, Length=236, Percent_Identity=23.728813559322, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 60682; Mature: 60682

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVNNVSLQFGGRKLFEEVNIKFTPGNCYGLIGANGAGKSTFLKILSGEQDTTTGDVSI
CEEEEEEEEEECCHHHHHHCCEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
TPGERLAVLKQDHYAYEDSAVLETVIMGHERLYKVMKEKDAIYMKEDFSDEDGMRAAELE
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEHHCC
GEFAELNGWEAESEASMVLQGLGISEALHQKQMSELTGGEKVKVLLAQALFGKPDILLLD
CCHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEE
EPTNGLDLKAIQWLEEFLINFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
YESSQLATRMAADQNKKKEEKIKELQNFIARFSSNASKARQATSRKKLLDKITLDDIRPS
ECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SRRYPFVGFTMEREIGNDVLYVDNVSKTIDGVKVLDNVTFSLNKTDKVAFVGRSDVAITT
CCCCCEEEEEEECCCCCCEEEECCCHHHHHHHHHHHCCEEEECCCCEEEEECCCCHHHHH
LFKILMGEMEPDTGSVKWGVTTTQSYFPKDNSEYFEGSEKSILDWLRQFSPADESDTFLR
HHHHHHCCCCCCCCCEEECEECCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCHHHHH
GFLGRMLFSGEEVMKKASVLSGGEKVRCMLSKMMLSNSNVLVLDDPTNHLDLESITALNN
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH
GLESFKGVLLFSSHDHQLISTIATRIIEVTPNGIVDKEATYDEYLENEALQQQVESLYQN
HHHHHCEEEEECCCCHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
A
C
>Mature Secondary Structure
MITVNNVSLQFGGRKLFEEVNIKFTPGNCYGLIGANGAGKSTFLKILSGEQDTTTGDVSI
CEEEEEEEEEECCHHHHHHCCEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
TPGERLAVLKQDHYAYEDSAVLETVIMGHERLYKVMKEKDAIYMKEDFSDEDGMRAAELE
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEHHCC
GEFAELNGWEAESEASMVLQGLGISEALHQKQMSELTGGEKVKVLLAQALFGKPDILLLD
CCHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEE
EPTNGLDLKAIQWLEEFLINFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
YESSQLATRMAADQNKKKEEKIKELQNFIARFSSNASKARQATSRKKLLDKITLDDIRPS
ECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SRRYPFVGFTMEREIGNDVLYVDNVSKTIDGVKVLDNVTFSLNKTDKVAFVGRSDVAITT
CCCCCEEEEEEECCCCCCEEEECCCHHHHHHHHHHHCCEEEECCCCEEEEECCCCHHHHH
LFKILMGEMEPDTGSVKWGVTTTQSYFPKDNSEYFEGSEKSILDWLRQFSPADESDTFLR
HHHHHHCCCCCCCCCEEECEECCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCHHHHH
GFLGRMLFSGEEVMKKASVLSGGEKVRCMLSKMMLSNSNVLVLDDPTNHLDLESITALNN
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH
GLESFKGVLLFSSHDHQLISTIATRIIEVTPNGIVDKEATYDEYLENEALQQQVESLYQN
HHHHHCEEEEECCCCHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]