Definition | Exiguobacterium sp. AT1b, complete genome. |
---|---|
Accession | NC_012673 |
Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229917017
Identifier: 229917017
GI number: 229917017
Start: 1268607
End: 1269062
Strand: Reverse
Name: 229917017
Synonym: EAT1b_1291
Alternate gene names: NA
Gene position: 1269062-1268607 (Counterclockwise)
Preceding gene: 229917018
Following gene: 229917016
Centisome position: 42.3
GC content: 45.39
Gene sequence:
>456_bases ATGCGTGCTTTAGTCATTGTATTATTAGTTGGCTTGATGACGATTGTGGGTTGTCAGCAGCTCCAGACAGAAGAGTCGAG TGAAGAGAATGTCGTTTACGAGCAAAATGTGGATGAAACGATGATTGATAAACGTGCAGGACAGTCCGATGCAATCGCCG TTTCTCTTGAACGAACGAATAACACGACGATGCTCTTCACGATTCGAATGCTCGAAAATCGTCGTCTTGATCCGACGACG GTCATGAGTTATGAGGTCGAAGGCGAACGCGTTGCGATTCCATTTGGTGAACTGATTGCAGAACGTGAAGAAGATATTCG GACGTATGAGTATCAGACAGACGTGGACCCGGATCTGTTCGTATCAGAGACACTTCCACTCTTCCATCTCGTTGAAGAAG GTGAATCGGAAGTCACGATACCACTCGAAGTCATTAATTCGACAAATGGTGAATAA
Upstream 100 bases:
>100_bases TTCGTGGACCAATCGGTAAAGGACATGCCGTGGCCACGGTCGACGGAGAAGTTGCTTGTGAAGCAGAACTCACTTTCGCC TTGAAGTAAGGAGAAATGGG
Downstream 100 bases:
>100_bases GAAACAGGCGATGTTGTCGAAAATCGCCTGTTTTTTTGTGGAGATAAATCTATTCTATCCGATAAAAAGAGTAAGGAGAG AATGGAGGAATTTTGAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MRALVIVLLVGLMTIVGCQQLQTEESSEENVVYEQNVDETMIDKRAGQSDAIAVSLERTNNTTMLFTIRMLENRRLDPTT VMSYEVEGERVAIPFGELIAEREEDIRTYEYQTDVDPDLFVSETLPLFHLVEEGESEVTIPLEVINSTNGE
Sequences:
>Translated_151_residues MRALVIVLLVGLMTIVGCQQLQTEESSEENVVYEQNVDETMIDKRAGQSDAIAVSLERTNNTTMLFTIRMLENRRLDPTT VMSYEVEGERVAIPFGELIAEREEDIRTYEYQTDVDPDLFVSETLPLFHLVEEGESEVTIPLEVINSTNGE >Mature_151_residues MRALVIVLLVGLMTIVGCQQLQTEESSEENVVYEQNVDETMIDKRAGQSDAIAVSLERTNNTTMLFTIRMLENRRLDPTT VMSYEVEGERVAIPFGELIAEREEDIRTYEYQTDVDPDLFVSETLPLFHLVEEGESEVTIPLEVINSTNGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17117; Mature: 17117
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALVIVLLVGLMTIVGCQQLQTEESSEENVVYEQNVDETMIDKRAGQSDAIAVSLERTN CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHCCCCCCEEEEEEECCC NTTMLFTIRMLENRRLDPTTVMSYEVEGERVAIPFGELIAEREEDIRTYEYQTDVDPDLF CEEEEEEEEECCCCCCCCCEEEEEEECCCEEEECHHHHHHHHHHHCEEEEECCCCCCCEE VSETLPLFHLVEEGESEVTIPLEVINSTNGE ECCCCHHHHHHHCCCCCEEEEEEEECCCCCC >Mature Secondary Structure MRALVIVLLVGLMTIVGCQQLQTEESSEENVVYEQNVDETMIDKRAGQSDAIAVSLERTN CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHCCCCCCEEEEEEECCC NTTMLFTIRMLENRRLDPTTVMSYEVEGERVAIPFGELIAEREEDIRTYEYQTDVDPDLF CEEEEEEEEECCCCCCCCCEEEEEEECCCEEEECHHHHHHHHHHHCEEEEECCCCCCCEE VSETLPLFHLVEEGESEVTIPLEVINSTNGE ECCCCHHHHHHHCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA