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The map label for this gene is 227827030

Identifier: 227827030

GI number: 227827030

Start: 641964

End: 642191

Strand: Direct

Name: 227827030

Synonym: M1425_0688

Alternate gene names: NA

Gene position: 641964-642191 (Clockwise)

Preceding gene: 227827029

Following gene: 227827032

Centisome position: 24.61

GC content: 36.4

Gene sequence:

>228_bases
ATGGTTTGTAGTAAGTGTGGACATTCTGATCATGATGTAGAAAAAGTGATATTGAAGGAGAATATAAATCATGAAAATGA
TAAGACAATAATAGCAGATGGCGAAACCATAGAGGGTAGAGTCGCTATCTCGCTCTGTCCTAGATGCGGTTCGGCGAGAG
CTATATTACTTAATAAGAAGAAAAGATTATATAGGTGCATGACGTGTAGCTTTGTTTACACTATTTAG

Upstream 100 bases:

>100_bases
TTAGTATGCTAGCCGCAAGCTTTTATGAGTAAAAGACTCATTTTTAGACATGCGTTTTTGTCCTAAATGCTGTTCCTTGA
TGAGGGTAAAAGGTAACAAA

Downstream 100 bases:

>100_bases
AAATTTCTTATATCTATACCAGTAACTTTTTGATAGTTTTCAAAGCCATATTGTTCTATAATGTCTAAGACCAAACCTTT
TCTTTCTTTTACCTTCGGAA

Product: DNA-directed RNA polymerase, subunit M (RpoM-2)

Products: diphosphate; RNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MVCSKCGHSDHDVEKVILKENINHENDKTIIADGETIEGRVAISLCPRCGSARAILLNKKKRLYRCMTCSFVYTI

Sequences:

>Translated_75_residues
MVCSKCGHSDHDVEKVILKENINHENDKTIIADGETIEGRVAISLCPRCGSARAILLNKKKRLYRCMTCSFVYTI
>Mature_75_residues
MVCSKCGHSDHDVEKVILKENINHENDKTIIADGETIEGRVAISLCPRCGSARAILLNKKKRLYRCMTCSFVYTI

Specific function: Unknown

COG id: COG1594

COG function: function code K; DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.6

Molecular weight: Translated: 8441; Mature: 8441

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
8.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
10.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCSKCGHSDHDVEKVILKENINHENDKTIIADGETIEGRVAISLCPRCGSARAILLNKK
CCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEEECC
KRLYRCMTCSFVYTI
HHHHHHHHEEEEEEC
>Mature Secondary Structure
MVCSKCGHSDHDVEKVILKENINHENDKTIIADGETIEGRVAISLCPRCGSARAILLNKK
CCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEEECC
KRLYRCMTCSFVYTI
HHHHHHHHEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: nucleoside triphosphate; RNAn

Specific reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA