| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227826950
Identifier: 227826950
GI number: 227826950
Start: 542858
End: 544132
Strand: Direct
Name: 227826950
Synonym: M1425_0604
Alternate gene names: NA
Gene position: 542858-544132 (Clockwise)
Preceding gene: 227826948
Following gene: 227826951
Centisome position: 20.81
GC content: 28.24
Gene sequence:
>1275_bases GTGTCAAAAGGGATAAAAACCAGTGTTCGGGTATATAAAATAGATTATATGAGTAGTAATAATAAAAAGATAAACGAAAG AGATTTAGCATTACTTAAAAAAGTTGGCAAGTATTATTTGCAATACAAAGGTATTATAGATCTAGATAAGCTGCTTTCCA TAATTGAAGCTACGGAAGAATTAAATATAGATGATATTACTAGGATTTATATAATTCAATATATTATATATCTTGCTGTT AAAGCTGCAGTTAGGGCAGCTAAAGAGGCCGAAAAAGACAGACTAACTTATAAGGAGTTCTCAATAGGATACGATCAAGA TATATTTGGAGAACTAAATATTGATAGGACCACAATTGTTTATCCTCAAGGGCTTTACGCATATTATACCTATACAGAAG GATATAATGCACCAGAATATGGAATTTTAGGTTACTTATTAAGAAGAATCTACGACACTGCAATAGATAAGTTTGTGGAG ATAAAATTACACCATTATTTTAACTTTACAGAAAAAATGAAAAAATTTATGAAGAAATTAGAGGAAATAAAAGAAAAGTT TCCTGAGGGATATTATAGAAATTCTACGTACACTGACCCTCAATGGCTCATAAGAGCTTTTAGGGCTTATGAGATTATGA AGAAATTAGAAAATATAGGAATAGGATTAAAAAGAAGTAAAACAGAAATAAAGAGACCCCTTATCAAATTTATATTATGG AAATTATATGAGCTTTATATTTTTTATCTCATAGTAAATTACCTTAAGAAAAAAGGATATAGGATTAAAAGAAAGGGGGA TAAAAATTATTTAGCGTTTAAAGATGGGATTTATTTCACTATAATTTTCAACTCAAATCTTGAAAACTCTGGACTATTGA GGGTAAATAATTACCCTAATTTAGAGAAATTTAAGGGAAAACCTGATATTTCCTTAGATCACAATTCTGGAGATAAAAAT AATATTATCATAATTGAGTGCAAATACTCAGATAGGCTAAGTTACATTAGTATGGGTCGTTTTAAAATAATGGCTTACGT ATATGAATATAATCCATTAACTGCAATTTTAGTATATCCTGGATTAAAAGAAGGGCAACTATTATATGACGATGAGGATA AAGCAACAAAGGAATTAGATGATTACGTAAAGAAAAATAACTACGTTAAATTTGAATTTAAAAATCATGAACTTTATATG GCTAGAATTAATCCTAAAGCTGAAGATGAGAAAAACCTTAAGACTATCGATGAAATTTTAGGAAAGTACATTTAA
Upstream 100 bases:
>100_bases ATGTCTCAAAATACAGAGAGACGGTTAATCGAAAGTGATACTTTTGGAAATCTAATACCAGAAATTGACAAGAATGTAGC TAATAAGGGTCTGGAGAGCG
Downstream 100 bases:
>100_bases ATGATCTAATAGTACAATTATCGATATATATTAACTTATAACACAAAAATGGTATCAATAATAGCAGTTATGAGGCTTTA ACGTAATTTAAACATTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MSKGIKTSVRVYKIDYMSSNNKKINERDLALLKKVGKYYLQYKGIIDLDKLLSIIEATEELNIDDITRIYIIQYIIYLAV KAAVRAAKEAEKDRLTYKEFSIGYDQDIFGELNIDRTTIVYPQGLYAYYTYTEGYNAPEYGILGYLLRRIYDTAIDKFVE IKLHHYFNFTEKMKKFMKKLEEIKEKFPEGYYRNSTYTDPQWLIRAFRAYEIMKKLENIGIGLKRSKTEIKRPLIKFILW KLYELYIFYLIVNYLKKKGYRIKRKGDKNYLAFKDGIYFTIIFNSNLENSGLLRVNNYPNLEKFKGKPDISLDHNSGDKN NIIIIECKYSDRLSYISMGRFKIMAYVYEYNPLTAILVYPGLKEGQLLYDDEDKATKELDDYVKKNNYVKFEFKNHELYM ARINPKAEDEKNLKTIDEILGKYI
Sequences:
>Translated_424_residues MSKGIKTSVRVYKIDYMSSNNKKINERDLALLKKVGKYYLQYKGIIDLDKLLSIIEATEELNIDDITRIYIIQYIIYLAV KAAVRAAKEAEKDRLTYKEFSIGYDQDIFGELNIDRTTIVYPQGLYAYYTYTEGYNAPEYGILGYLLRRIYDTAIDKFVE IKLHHYFNFTEKMKKFMKKLEEIKEKFPEGYYRNSTYTDPQWLIRAFRAYEIMKKLENIGIGLKRSKTEIKRPLIKFILW KLYELYIFYLIVNYLKKKGYRIKRKGDKNYLAFKDGIYFTIIFNSNLENSGLLRVNNYPNLEKFKGKPDISLDHNSGDKN NIIIIECKYSDRLSYISMGRFKIMAYVYEYNPLTAILVYPGLKEGQLLYDDEDKATKELDDYVKKNNYVKFEFKNHELYM ARINPKAEDEKNLKTIDEILGKYI >Mature_423_residues SKGIKTSVRVYKIDYMSSNNKKINERDLALLKKVGKYYLQYKGIIDLDKLLSIIEATEELNIDDITRIYIIQYIIYLAVK AAVRAAKEAEKDRLTYKEFSIGYDQDIFGELNIDRTTIVYPQGLYAYYTYTEGYNAPEYGILGYLLRRIYDTAIDKFVEI KLHHYFNFTEKMKKFMKKLEEIKEKFPEGYYRNSTYTDPQWLIRAFRAYEIMKKLENIGIGLKRSKTEIKRPLIKFILWK LYELYIFYLIVNYLKKKGYRIKRKGDKNYLAFKDGIYFTIIFNSNLENSGLLRVNNYPNLEKFKGKPDISLDHNSGDKNN IIIIECKYSDRLSYISMGRFKIMAYVYEYNPLTAILVYPGLKEGQLLYDDEDKATKELDDYVKKNNYVKFEFKNHELYMA RINPKAEDEKNLKTIDEILGKYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50434; Mature: 50303
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKGIKTSVRVYKIDYMSSNNKKINERDLALLKKVGKYYLQYKGIIDLDKLLSIIEATEE CCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LNIDDITRIYIIQYIIYLAVKAAVRAAKEAEKDRLTYKEFSIGYDQDIFGELNIDRTTIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEE YPQGLYAYYTYTEGYNAPEYGILGYLLRRIYDTAIDKFVEIKLHHYFNFTEKMKKFMKKL ECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEHHHHHCCHHHHHHHHHHHH EEIKEKFPEGYYRNSTYTDPQWLIRAFRAYEIMKKLENIGIGLKRSKTEIKRPLIKFILW HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH KLYELYIFYLIVNYLKKKGYRIKRKGDKNYLAFKDGIYFTIIFNSNLENSGLLRVNNYPN HHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCEEEEEEEECCCCCCCEEEECCCCC LEKFKGKPDISLDHNSGDKNNIIIIECKYSDRLSYISMGRFKIMAYVYEYNPLTAILVYP HHHHCCCCCEEEECCCCCCCCEEEEEEECCCCCCHHCCCCEEEEEEEEECCCEEEEEEEC GLKEGQLLYDDEDKATKELDDYVKKNNYVKFEFKNHELYMARINPKAEDEKNLKTIDEIL CCCCCCEEECCCHHHHHHHHHHHHCCCEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHH GKYI HHCC >Mature Secondary Structure SKGIKTSVRVYKIDYMSSNNKKINERDLALLKKVGKYYLQYKGIIDLDKLLSIIEATEE CCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LNIDDITRIYIIQYIIYLAVKAAVRAAKEAEKDRLTYKEFSIGYDQDIFGELNIDRTTIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEE YPQGLYAYYTYTEGYNAPEYGILGYLLRRIYDTAIDKFVEIKLHHYFNFTEKMKKFMKKL ECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEHHHHHCCHHHHHHHHHHHH EEIKEKFPEGYYRNSTYTDPQWLIRAFRAYEIMKKLENIGIGLKRSKTEIKRPLIKFILW HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH KLYELYIFYLIVNYLKKKGYRIKRKGDKNYLAFKDGIYFTIIFNSNLENSGLLRVNNYPN HHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCEEEEEEEECCCCCCCEEEECCCCC LEKFKGKPDISLDHNSGDKNNIIIIECKYSDRLSYISMGRFKIMAYVYEYNPLTAILVYP HHHHCCCCCEEEECCCCCCCCEEEEEEECCCCCCHHCCCCEEEEEEEEECCCEEEEEEEC GLKEGQLLYDDEDKATKELDDYVKKNNYVKFEFKNHELYMARINPKAEDEKNLKTIDEIL CCCCCCEEECCCHHHHHHHHHHHHCCCEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHH GKYI HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA