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The map label for this gene is hom1 [H]

Identifier: 227815212

GI number: 227815212

Start: 2387172

End: 2388467

Strand: Reverse

Name: hom1 [H]

Synonym: BAMEG_2623

Alternate gene names: 227815212

Gene position: 2388467-2387172 (Counterclockwise)

Preceding gene: 227815213

Following gene: 227815211

Centisome position: 45.67

GC content: 36.19

Gene sequence:

>1296_bases
ATGAATAACGTTATTCATGTAGGGGTGTTAGGATTAGGTACGGTCGGAAGTGGTGTTGTCCATATTTTGAAAGAACATTA
TAAAAAAATTGCACTTGATACAGGGTATGAGGTGAAGGTGAAGACAGTCGTTGTACGTGATTTAGAAAAAGAACGTGATG
TTTGTATTGATGGAATCGTAGTAACATGTCATGTCGATGAAGTTCTAAATGATCCAAATATTGATATTGTAGTAGAGGTA
ATGGGCGGAATTGAAGAAGCGAAGCAGCATATTGTTAAGGCTTTACGAAATAAGAAACATGTCGTGACAGCAAATAAAGA
TTTAATGGCTGTATACGGTGCAGAGCTTTTGCAACTGGCGAACGATAATGATTGTGATCTATGTTATGAGGCAAGTGTAG
CTGGTGGTATTCCAGTGTTAAGAGGACTAACAGACGGATTAGCTTCAGATCAAATTGAAAAAATAATGGGAATCGTAAAT
GGAACAACAAATTATATGTTAACAAAGATGAGTCAAAAGGGATGGTCGTATGAAGAGGCTTTACAAGAAGCGCAAAAATT
AGGTTTCGCAGAATCAGATCCGACAGCGGATGTAGATGGATTAGATGCAGCGAGAAAAGTAGCAATCCTTGCAAATTTAG
GTTTTTCGATGAATGTTTCTTTGGATGATGTGCAAGTAAGAGGGATTCGAAAGGTAGAAAAAGAAGATTTACAAATGGCT
GAAAAGTTAGGGTTTACTATGAAGTTAATTGGTAAAGCAGAGAAACAGGGATCAGCTATTCATTTAAGTGTAGAACCGAC
ACTTTTACCAAGTCATCATCCATTGTCAAATGTAAATAATGAATTTAATGCAGTGTATGTTCACGGGCAAGCGGTAGGAG
AAGTGATGTTTTACGGACCTGGAGCAGGTAAATTGCCGACTGGTTCTGCAGTAGTAAGTGATATTATTTCAATCGTTAAA
AATATGAATCAAGTTCCGAAAAATAAAAGTGTGTTAAAAGAACCGGAGCCATACGAATTACAAGGGGATGAAGAAGTCGT
TTCGAAATATTTCTTACGTATTTCATTACGAGATGAGCCAGGGATGTTACAAAAAATAACAGAATGTTTCGTTAATTATT
CTGTAAGTTTAAAAGAAGTAATTCAATTACCTTTAAATCGTGAACTTGCAGAAGTCGTTGTTGTGACACATCAAACTTCA
AAGTATCAATTCGAACGAGTTTTAGGGGCAATAGAAGATGTCGCAAGTGAAATAAACAGTTACTACATTATCGAGGAGGA
AAAACAATATGTATAA

Upstream 100 bases:

>100_bases
CGATTTGTACGTACGGAAATAACCACCACCTGCATGATTAAAAAGCAGAGCAAGGTGATTGGTAAAGATAAATAATAAAA
TTGTAGGAGGAGATTAGAAG

Downstream 100 bases:

>100_bases
AGGGCTATTAAACCAATATGCTTCTTATTTACCGGTAAATGAAAACACACCAGATGTGAGCTTAATGGAAGGAAATACAC
CCCTTATTCCGTTATTAAAC

Product: homoserine dehydrogenase

Products: NA

Alternate protein names: HDH [H]

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MNNVIHVGVLGLGTVGSGVVHILKEHYKKIALDTGYEVKVKTVVVRDLEKERDVCIDGIVVTCHVDEVLNDPNIDIVVEV
MGGIEEAKQHIVKALRNKKHVVTANKDLMAVYGAELLQLANDNDCDLCYEASVAGGIPVLRGLTDGLASDQIEKIMGIVN
GTTNYMLTKMSQKGWSYEEALQEAQKLGFAESDPTADVDGLDAARKVAILANLGFSMNVSLDDVQVRGIRKVEKEDLQMA
EKLGFTMKLIGKAEKQGSAIHLSVEPTLLPSHHPLSNVNNEFNAVYVHGQAVGEVMFYGPGAGKLPTGSAVVSDIISIVK
NMNQVPKNKSVLKEPEPYELQGDEEVVSKYFLRISLRDEPGMLQKITECFVNYSVSLKEVIQLPLNRELAEVVVVTHQTS
KYQFERVLGAIEDVASEINSYYIIEEEKQYV

Sequences:

>Translated_431_residues
MNNVIHVGVLGLGTVGSGVVHILKEHYKKIALDTGYEVKVKTVVVRDLEKERDVCIDGIVVTCHVDEVLNDPNIDIVVEV
MGGIEEAKQHIVKALRNKKHVVTANKDLMAVYGAELLQLANDNDCDLCYEASVAGGIPVLRGLTDGLASDQIEKIMGIVN
GTTNYMLTKMSQKGWSYEEALQEAQKLGFAESDPTADVDGLDAARKVAILANLGFSMNVSLDDVQVRGIRKVEKEDLQMA
EKLGFTMKLIGKAEKQGSAIHLSVEPTLLPSHHPLSNVNNEFNAVYVHGQAVGEVMFYGPGAGKLPTGSAVVSDIISIVK
NMNQVPKNKSVLKEPEPYELQGDEEVVSKYFLRISLRDEPGMLQKITECFVNYSVSLKEVIQLPLNRELAEVVVVTHQTS
KYQFERVLGAIEDVASEINSYYIIEEEKQYV
>Mature_431_residues
MNNVIHVGVLGLGTVGSGVVHILKEHYKKIALDTGYEVKVKTVVVRDLEKERDVCIDGIVVTCHVDEVLNDPNIDIVVEV
MGGIEEAKQHIVKALRNKKHVVTANKDLMAVYGAELLQLANDNDCDLCYEASVAGGIPVLRGLTDGLASDQIEKIMGIVN
GTTNYMLTKMSQKGWSYEEALQEAQKLGFAESDPTADVDGLDAARKVAILANLGFSMNVSLDDVQVRGIRKVEKEDLQMA
EKLGFTMKLIGKAEKQGSAIHLSVEPTLLPSHHPLSNVNNEFNAVYVHGQAVGEVMFYGPGAGKLPTGSAVVSDIISIVK
NMNQVPKNKSVLKEPEPYELQGDEEVVSKYFLRISLRDEPGMLQKITECFVNYSVSLKEVIQLPLNRELAEVVVVTHQTS
KYQFERVLGAIEDVASEINSYYIIEEEKQYV

Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]

COG id: COG0460

COG function: function code E; Homoserine dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

Organism=Escherichia coli, GI1786183, Length=256, Percent_Identity=27.734375, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1790376, Length=354, Percent_Identity=24.2937853107345, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322599, Length=128, Percent_Identity=30.46875, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR005106
- InterPro:   IPR016204
- InterPro:   IPR001342
- InterPro:   IPR019811
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01842 ACT; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]

EC number: =1.1.1.3 [H]

Molecular weight: Translated: 47395; Mature: 47395

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS01042 HOMOSER_DHGENASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNVIHVGVLGLGTVGSGVVHILKEHYKKIALDTGYEVKVKTVVVRDLEKERDVCIDGIV
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHCCCEECCEE
VTCHVDEVLNDPNIDIVVEVMGGIEEAKQHIVKALRNKKHVVTANKDLMAVYGAELLQLA
EEEEEHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
NDNDCDLCYEASVAGGIPVLRGLTDGLASDQIEKIMGIVNGTTNYMLTKMSQKGWSYEEA
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEHHHCCCCHHHH
LQEAQKLGFAESDPTADVDGLDAARKVAILANLGFSMNVSLDDVQVRGIRKVEKEDLQMA
HHHHHHCCCCCCCCCCCCCCCHHHHHEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHH
EKLGFTMKLIGKAEKQGSAIHLSVEPTLLPSHHPLSNVNNEFNAVYVHGQAVGEVMFYGP
HHCCCHHEEHHHHCCCCCEEEEEECCEECCCCCCCCCCCCCCEEEEEECCEECEEEEECC
GAGKLPTGSAVVSDIISIVKNMNQVPKNKSVLKEPEPYELQGDEEVVSKYFLRISLRDEP
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCC
GMLQKITECFVNYSVSLKEVIQLPLNRELAEVVVVTHQTSKYQFERVLGAIEDVASEINS
CHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCC
YYIIEEEKQYV
EEEEECCCCCC
>Mature Secondary Structure
MNNVIHVGVLGLGTVGSGVVHILKEHYKKIALDTGYEVKVKTVVVRDLEKERDVCIDGIV
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHCCCEECCEE
VTCHVDEVLNDPNIDIVVEVMGGIEEAKQHIVKALRNKKHVVTANKDLMAVYGAELLQLA
EEEEEHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
NDNDCDLCYEASVAGGIPVLRGLTDGLASDQIEKIMGIVNGTTNYMLTKMSQKGWSYEEA
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEHHHCCCCHHHH
LQEAQKLGFAESDPTADVDGLDAARKVAILANLGFSMNVSLDDVQVRGIRKVEKEDLQMA
HHHHHHCCCCCCCCCCCCCCCHHHHHEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHH
EKLGFTMKLIGKAEKQGSAIHLSVEPTLLPSHHPLSNVNNEFNAVYVHGQAVGEVMFYGP
HHCCCHHEEHHHHCCCCCEEEEEECCEECCCCCCCCCCCCCCEEEEEECCEECEEEEECC
GAGKLPTGSAVVSDIISIVKNMNQVPKNKSVLKEPEPYELQGDEEVVSKYFLRISLRDEP
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCC
GMLQKITECFVNYSVSLKEVIQLPLNRELAEVVVVTHQTSKYQFERVLGAIEDVASEINS
CHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCC
YYIIEEEKQYV
EEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3139660; 9384377; 3098560 [H]