| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is gshB
Identifier: 227080678
GI number: 227080678
Start: 481667
End: 482623
Strand: Reverse
Name: gshB
Synonym: VCM66_0453
Alternate gene names: 227080678
Gene position: 482623-481667 (Counterclockwise)
Preceding gene: 227080679
Following gene: 227080677
Centisome position: 16.69
GC content: 49.32
Gene sequence:
>957_bases ATGATTAAACTCGGTATTGTGATGGACCCTATCGCGTCCATTAACATCAAAAAAGATTCCAGCTTTGCCATGATGCTTGA AGCGCAGCGTCGCGGTTATGAAATCCATTATATGGAGATGAATGATCTACACTTAGAGCAAGGTGTAGCACTGGCCGATA CTAAAGTTGTCGAGCTGAAAGAAGATCCGAGCGGTTGGTACCAATTCAAATCTGAGCAAACCATCGCACTTTCTGAATTG GATGCGATTTTAATGCGTAAGGATCCGCCGTTCGACACCGAATACATCTACGCAACCTACATTTTGGAGCGCGCGGAAGA TGAAGGCGTATTAGTGGTGAACAAACCACAAAGCCTGCGCGATTGTAATGAAAAACTGTTCACCGCTTGGTTCCCAGAGC TGACGCCGATCACTATGGTGACGCGCAAAGCCGAGAAGATTAAAGCCTTCCGTGAACAGCATGGGGATGTGATTCTAAAA CCCCTCGACGGTATGGGCGGTGCTTCGATTTTCCGCGTTAAAGAGGGCGATCCAAACCTCTCAGTGATCATCGAAACCTT AACCAACCACGGCCAGAATTACTGCATGGCGCAGACCTTTGTGCCAGATATCAGCAACGGTGATAAACGCATTTTGGTGG TCGATGGTGAACCTATGCCTTACTGCTTGGCGCGTATCCCCGCCAAAGGGGAAACCCGCGGTAACTTGGCGGCTGGCGGT CGTGGTGAGCCTCGCCCACTGAGTGAAACCGATAAGAAAATTGCCCTAGCGGTCGCACCGACTCTCAAAGAGAAAGGGCT GCTGTTTGTAGGCTTAGATGTCATTGGCGATAAACTGACCGAAATTAACGTCACCAGCCCAACCTGCATTCGAGAGATTG AAGCTGCGTACGATATTTCAATCACAGGCAAGCTGATGGATGCCATTGAGCGTCGCTTAAAAGCGACGGCGATGTGA
Upstream 100 bases:
>100_bases TTGTTAGGCCCACGCGTACTACGCACAGAAACGGCGGCGCTCACGGCGATAACTGCACTACAAGTTCGTTTCGGCGATCT TGGCTAAATGGAGATAAACC
Downstream 100 bases:
>100_bases GCAACCATAGCAGTGACATAGAGGTTGGACACAGTATGAATCTTACCAATCATTTTCTGGTTGCCATGCCAAGCATGAAG GATCCTTACTTCAAGCGCAG
Product: glutathione synthetase
Products: NA
Alternate protein names: GSH synthetase; GSH-S; GSHase; Glutathione synthase
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MIKLGIVMDPIASINIKKDSSFAMMLEAQRRGYEIHYMEMNDLHLEQGVALADTKVVELKEDPSGWYQFKSEQTIALSEL DAILMRKDPPFDTEYIYATYILERAEDEGVLVVNKPQSLRDCNEKLFTAWFPELTPITMVTRKAEKIKAFREQHGDVILK PLDGMGGASIFRVKEGDPNLSVIIETLTNHGQNYCMAQTFVPDISNGDKRILVVDGEPMPYCLARIPAKGETRGNLAAGG RGEPRPLSETDKKIALAVAPTLKEKGLLFVGLDVIGDKLTEINVTSPTCIREIEAAYDISITGKLMDAIERRLKATAM
Sequences:
>Translated_318_residues MIKLGIVMDPIASINIKKDSSFAMMLEAQRRGYEIHYMEMNDLHLEQGVALADTKVVELKEDPSGWYQFKSEQTIALSEL DAILMRKDPPFDTEYIYATYILERAEDEGVLVVNKPQSLRDCNEKLFTAWFPELTPITMVTRKAEKIKAFREQHGDVILK PLDGMGGASIFRVKEGDPNLSVIIETLTNHGQNYCMAQTFVPDISNGDKRILVVDGEPMPYCLARIPAKGETRGNLAAGG RGEPRPLSETDKKIALAVAPTLKEKGLLFVGLDVIGDKLTEINVTSPTCIREIEAAYDISITGKLMDAIERRLKATAM >Mature_318_residues MIKLGIVMDPIASINIKKDSSFAMMLEAQRRGYEIHYMEMNDLHLEQGVALADTKVVELKEDPSGWYQFKSEQTIALSEL DAILMRKDPPFDTEYIYATYILERAEDEGVLVVNKPQSLRDCNEKLFTAWFPELTPITMVTRKAEKIKAFREQHGDVILK PLDGMGGASIFRVKEGDPNLSVIIETLTNHGQNYCMAQTFVPDISNGDKRILVVDGEPMPYCLARIPAKGETRGNLAAGG RGEPRPLSETDKKIALAVAPTLKEKGLLFVGLDVIGDKLTEINVTSPTCIREIEAAYDISITGKLMDAIERRLKATAM
Specific function: Glutathione biosynthesis; second step. [C]
COG id: COG0189
COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain
Homologues:
Organism=Escherichia coli, GI1789316, Length=314, Percent_Identity=74.5222929936306, Blast_Score=498, Evalue=1e-142,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GSHB_VIBCH (Q9KUP7)
Other databases:
- EMBL: AE003852 - PIR: A82319 - RefSeq: NP_230122.1 - ProteinModelPortal: Q9KUP7 - SMR: Q9KUP7 - GeneID: 2615130 - GenomeReviews: AE003852_GR - KEGG: vch:VC0468 - TIGR: VC_0468 - HOGENOM: HBG624526 - OMA: WMRKDPP - ProtClustDB: PRK05246 - BRENDA: 6.3.2.3 - HAMAP: MF_00162 - InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR006284 - InterPro: IPR004218 - InterPro: IPR004215 - InterPro: IPR013817 - InterPro: IPR016185 - Gene3D: G3DSA:3.30.1490.20 - Gene3D: G3DSA:3.30.470.20 - Gene3D: G3DSA:3.40.50.20 - TIGRFAMs: TIGR01380
Pfam domain/function: PF02955 GSH-S_ATP; PF02951 GSH-S_N; SSF52440 PreATP-grasp-like
EC number: =6.3.2.3
Molecular weight: Translated: 35408; Mature: 35408
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLGIVMDPIASINIKKDSSFAMMLEAQRRGYEIHYMEMNDLHLEQGVALADTKVVELK CEEECEEECCCCEEEEECCCCEEEEEEHHHCCCEEEEEEECCEEHHCCCEEECEEEEEEE EDPSGWYQFKSEQTIALSELDAILMRKDPPFDTEYIYATYILERAEDEGVLVVNKPQSLR CCCCCCEEECCCCEEEHHHHHHHEECCCCCCCCCEEEEEEEEECCCCCCEEEEECCHHHH DCNEKLFTAWFPELTPITMVTRKAEKIKAFREQHGDVILKPLDGMGGASIFRVKEGDPNL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCC SVIIETLTNHGQNYCMAQTFVPDISNGDKRILVVDGEPMPYCLARIPAKGETRGNLAAGG EEEEEEHHCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCC RGEPRPLSETDKKIALAVAPTLKEKGLLFVGLDVIGDKLTEINVTSPTCIREIEAAYDIS CCCCCCCCCCCCEEEEEEECCCCCCCEEEEEHHHHCCCEEEEECCCCHHHHHHHHHEEEE ITGKLMDAIERRLKATAM EHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIKLGIVMDPIASINIKKDSSFAMMLEAQRRGYEIHYMEMNDLHLEQGVALADTKVVELK CEEECEEECCCCEEEEECCCCEEEEEEHHHCCCEEEEEEECCEEHHCCCEEECEEEEEEE EDPSGWYQFKSEQTIALSELDAILMRKDPPFDTEYIYATYILERAEDEGVLVVNKPQSLR CCCCCCEEECCCCEEEHHHHHHHEECCCCCCCCCEEEEEEEEECCCCCCEEEEECCHHHH DCNEKLFTAWFPELTPITMVTRKAEKIKAFREQHGDVILKPLDGMGGASIFRVKEGDPNL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCC SVIIETLTNHGQNYCMAQTFVPDISNGDKRILVVDGEPMPYCLARIPAKGETRGNLAAGG EEEEEEHHCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCC RGEPRPLSETDKKIALAVAPTLKEKGLLFVGLDVIGDKLTEINVTSPTCIREIEAAYDIS CCCCCCCCCCCCEEEEEEECCCCCCCEEEEEHHHHCCCEEEEECCCCHHHHHHHHHEEEE ITGKLMDAIERRLKATAM EHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301