| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080575
Identifier: 227080575
GI number: 227080575
Start: 367792
End: 367902
Strand: Reverse
Name: 227080575
Synonym: VCM66_0347
Alternate gene names: NA
Gene position: 367902-367792 (Counterclockwise)
Preceding gene: 227080582
Following gene: 227080565
Centisome position: 12.72
GC content: 44.14
Gene sequence:
>111_bases TTGCTCAGATCGGATTGTTATAAGAAAATGGCGATGAGACAGAGAAATGCTCAACTGAAAGTGCAGCGCCAACGCTCTGG TCATTTGGTCGAGGCTAATGTGTTGTTTTGA
Upstream 100 bases:
>100_bases GAGACACCATGACACAAACAAACGTACATAACCCAACCTCATTTCATTCATGAACAAAGAATAAAAGAGAATCACTCTTA TTTCTACTGCGTTTACTATT
Downstream 100 bases:
>100_bases TTATGAGCGGGATAAAACCAAAAGAAGATATAAGCCTAAGATGACTTATAACCAAAAATGAAAAAGGGAAGCCGAAGCTT CCCTTTTTCGATGCAGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 36; Mature: 36
Protein sequence:
>36_residues MLRSDCYKKMAMRQRNAQLKVQRQRSGHLVEANVLF
Sequences:
>Translated_36_residues MLRSDCYKKMAMRQRNAQLKVQRQRSGHLVEANVLF >Mature_36_residues MLRSDCYKKMAMRQRNAQLKVQRQRSGHLVEANVLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4307; Mature: 4307
Theoretical pI: Translated: 11.54; Mature: 11.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 11.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 8.3 %Met (Mature Protein) 11.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSDCYKKMAMRQRNAQLKVQRQRSGHLVEANVLF CCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECC >Mature Secondary Structure MLRSDCYKKMAMRQRNAQLKVQRQRSGHLVEANVLF CCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA