| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is luxC [H]
Identifier: 227080470
GI number: 227080470
Start: 243280
End: 245757
Strand: Direct
Name: luxC [H]
Synonym: VCM66_0239
Alternate gene names: 227080470
Gene position: 243280-245757 (Clockwise)
Preceding gene: 227080469
Following gene: 227080471
Centisome position: 8.41
GC content: 42.37
Gene sequence:
>2478_bases ATGCCTGTAAATAACGAAAATCTGACCAGTGTACTTGATGCTCGCCCTTTTGAATTATCAGAAGAGCAAAAATCTCCACT ATTTAAAGCGAACTTACTTGCAGAGTTAGTACATCATTATCAATGCAACGAGATGTATCGCAAATTTTGTCAAAAAAACA AATTTGACCCTTTGGTATTTGATGGTGAGGTTGCAGATATTCCACCCATACCTGTGCACATCTTCAAAGCAATAGGACAT AAATTATCTTCGGTAAGCGATGATACGATAAAAGCGAAGCTTCAATCTTCTGCTACCAGTGGCGTACCCAGTACCATATT GTTAGATAAGGTAACCGCTCGTCGACAGACTCGAGCAATGGCAAGAGTTATGCAGGAGGTGTTGGGGCCTAAACGTCGCC CGTTTTGCATTATGGATATTGATCCGACAAGCCCAAATGCCACTAACCTTGGGGCTCGTATTGCGGCGGTAAAAGGTTAC CTAAACTTCGCCTCAACATCGAAGTATTTTATAGATGCTGATAGCCCAAGTGCTCCACTTGAATTTCTGGAGCAAAAGTT TGTTGAACATCTGAATTCACTTGCGAGTGAAGAGCCGCTCATAATTTTTGGATTCACGTTTGTACTTTATCACACGGTTT TTAAGACCCTTAAAGACAAGGGGATCTCGTTTCAATTGCCTAAAGGTTCTCAGGTTATTCATATTGGTGGTTGGAAAAAA CTTGAGTCAGAGAAGGTGGATAAAATTACCTTTAATCGAGATATCGCCTCAGTATTGGGTATTTCTCCTGATGATGTTGT GGATATCTATGGTTTCACTGAACAGATGGGGCTTAATTACCCAGATTGTAAAGCAGGATGGAAACATATTCATGCCTATT CTGACGTAATTATTCGTGATGAATCGAACCTAGAAGTGTGTGGGCCAGGTAAAGTAGGCTTACTTGAGTTTGTAAGCCCA CTACCGCATTCATATCCGGGGAATGTTGTACTTACAGATGACCTTGGTGTGATTGAAGAAAGTCTTTGTGAGTGTGGTAA AGCTGGAAAAAGATTCAAAGTCATTGGACGAGCAAAAAAAGCAGAAGTAAGAGGCTGTGGTGATGTTATGTCTGAGAAAT TGACTAAAAAGCCATCGTATAAGCCACTTTCTCAACAAGAAGAGAGGTTGACTATCTACCACTCACCGATATTTCTCGAT GATACTATGTCCGCATCTCAGCAGCTTGATCAAATCTTTTGTTCTTTAAAGAGGAAGCAAAAATGGCTGGCTAACCAACC ATTAGAAGCTATTCTTGGTTTAATCAATGAAGCGCGCAAAAGCTGGTCGAGTACGCCGGAGCTTGACCCTTATCGACATA CTGGATTGAACTTCCTAGCTGATTGGTGTGAACCCAATCGTTTGAAAAACCTGCTTGATTCAGCATTGAATGGTCAGCGA GCTTTTTTGGATAATTTTTTACCTCGTAAAGATATTAGCCATAGCTCTCAAAAAGCAATGCCAAGAGGTATCGTATCTCA CTGGCTGTCGGGTAACGTACCGTTACTCGGCATGTTTGCGCTGGTACAGAGTATTTTAAGTAAAAATGCCAACATTCTGA AAGTTTCAGCAAGCGAATCGCAAGCTTTGCCAGTATTATTGGCGACTTTTAAAGGCCTTAGCTACACTACCCCAGGTGGT TACACTATCCACGGTGATGACTTATTAGGGACTCTCGCTGTTGTATATTTTGATCGACACCAAACTAAAATTGCAGAGAA GTTTTCGGCCAATGCTGATGTGCGTATAGCTTGGGGGGGACGAGAGGCAATCGAGTCTGTAAGTGGCCTTCCAAAGAAAT ATAATAGTCAAGATATCCTCTTTGGACCTAAGCTTTCTATGATGGTTGTTGGCAGCGATGCTCTAGACTCTGACAAGGCA ATCAGAAAGTTGATTCGTCGGGCTGCAACTGACTCTAGTGTGTTCGATCAGTTTGCTTGCGCTTCTCCGCACACCATTTT TGTTGAGAAGGGCGGTCTAATAACACCTAAAGAGTTTGCAGAGAAGCTTGCCTCAGCAATGGATAAGGCTCTTGTACGCT TACCAACTCAAGTACCAGACATTGGGCAAGCAAATAAGATTCGCTCAAAGATAGCGGAATATGCATTTATTGGCGAATAT TGGCATGACAAGCACTTACGTTGGACGGTGTTGTTTGATGAAGGGATAGAGCTTGTTGAGCCGACATATCAACGTGTTAT TACAGTAAAAGCAGTTGATAATGTATTTGATGTAGTCGACAGTGTACATGAAGATATCCAAACGGTCGGGTTGGCGATGA ATGGTGAAAAGCGTCTTCGTTTTGCTAACGAGATAATGTTAAAAGGTGCGATGCGATGTCCAGATGTCGGCTACATGACC CATTTTGATTCCCCATGGGATGGGGTTGTAGCGCTAGATAGAATGGTTCGTTGGGTAACTCTAGGAGGACCGCTGTGA
Upstream 100 bases:
>100_bases AACAGCTGACAACGATCGCTGAAAATGCTTTACTTGACCCTGCTGCTAAGTCAAATCCTGTTCGATTTACAGAAAACGAT GTGAAAGAGATTGTGAAGCA
Downstream 100 bases:
>100_bases GTTCTCAACAGAATAGACTCAAGAAAAATTCGTTTCAATAAGTCGATGTTCCAAACTTAGGGTGTAATTATGAGCGGTAA CGGTTACTACAGTGAAGATG
Product: acyl protein synthase/acyl-CoA reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 825; Mature: 824
Protein sequence:
>825_residues MPVNNENLTSVLDARPFELSEEQKSPLFKANLLAELVHHYQCNEMYRKFCQKNKFDPLVFDGEVADIPPIPVHIFKAIGH KLSSVSDDTIKAKLQSSATSGVPSTILLDKVTARRQTRAMARVMQEVLGPKRRPFCIMDIDPTSPNATNLGARIAAVKGY LNFASTSKYFIDADSPSAPLEFLEQKFVEHLNSLASEEPLIIFGFTFVLYHTVFKTLKDKGISFQLPKGSQVIHIGGWKK LESEKVDKITFNRDIASVLGISPDDVVDIYGFTEQMGLNYPDCKAGWKHIHAYSDVIIRDESNLEVCGPGKVGLLEFVSP LPHSYPGNVVLTDDLGVIEESLCECGKAGKRFKVIGRAKKAEVRGCGDVMSEKLTKKPSYKPLSQQEERLTIYHSPIFLD DTMSASQQLDQIFCSLKRKQKWLANQPLEAILGLINEARKSWSSTPELDPYRHTGLNFLADWCEPNRLKNLLDSALNGQR AFLDNFLPRKDISHSSQKAMPRGIVSHWLSGNVPLLGMFALVQSILSKNANILKVSASESQALPVLLATFKGLSYTTPGG YTIHGDDLLGTLAVVYFDRHQTKIAEKFSANADVRIAWGGREAIESVSGLPKKYNSQDILFGPKLSMMVVGSDALDSDKA IRKLIRRAATDSSVFDQFACASPHTIFVEKGGLITPKEFAEKLASAMDKALVRLPTQVPDIGQANKIRSKIAEYAFIGEY WHDKHLRWTVLFDEGIELVEPTYQRVITVKAVDNVFDVVDSVHEDIQTVGLAMNGEKRLRFANEIMLKGAMRCPDVGYMT HFDSPWDGVVALDRMVRWVTLGGPL
Sequences:
>Translated_825_residues MPVNNENLTSVLDARPFELSEEQKSPLFKANLLAELVHHYQCNEMYRKFCQKNKFDPLVFDGEVADIPPIPVHIFKAIGH KLSSVSDDTIKAKLQSSATSGVPSTILLDKVTARRQTRAMARVMQEVLGPKRRPFCIMDIDPTSPNATNLGARIAAVKGY LNFASTSKYFIDADSPSAPLEFLEQKFVEHLNSLASEEPLIIFGFTFVLYHTVFKTLKDKGISFQLPKGSQVIHIGGWKK LESEKVDKITFNRDIASVLGISPDDVVDIYGFTEQMGLNYPDCKAGWKHIHAYSDVIIRDESNLEVCGPGKVGLLEFVSP LPHSYPGNVVLTDDLGVIEESLCECGKAGKRFKVIGRAKKAEVRGCGDVMSEKLTKKPSYKPLSQQEERLTIYHSPIFLD DTMSASQQLDQIFCSLKRKQKWLANQPLEAILGLINEARKSWSSTPELDPYRHTGLNFLADWCEPNRLKNLLDSALNGQR AFLDNFLPRKDISHSSQKAMPRGIVSHWLSGNVPLLGMFALVQSILSKNANILKVSASESQALPVLLATFKGLSYTTPGG YTIHGDDLLGTLAVVYFDRHQTKIAEKFSANADVRIAWGGREAIESVSGLPKKYNSQDILFGPKLSMMVVGSDALDSDKA IRKLIRRAATDSSVFDQFACASPHTIFVEKGGLITPKEFAEKLASAMDKALVRLPTQVPDIGQANKIRSKIAEYAFIGEY WHDKHLRWTVLFDEGIELVEPTYQRVITVKAVDNVFDVVDSVHEDIQTVGLAMNGEKRLRFANEIMLKGAMRCPDVGYMT HFDSPWDGVVALDRMVRWVTLGGPL >Mature_824_residues PVNNENLTSVLDARPFELSEEQKSPLFKANLLAELVHHYQCNEMYRKFCQKNKFDPLVFDGEVADIPPIPVHIFKAIGHK LSSVSDDTIKAKLQSSATSGVPSTILLDKVTARRQTRAMARVMQEVLGPKRRPFCIMDIDPTSPNATNLGARIAAVKGYL NFASTSKYFIDADSPSAPLEFLEQKFVEHLNSLASEEPLIIFGFTFVLYHTVFKTLKDKGISFQLPKGSQVIHIGGWKKL ESEKVDKITFNRDIASVLGISPDDVVDIYGFTEQMGLNYPDCKAGWKHIHAYSDVIIRDESNLEVCGPGKVGLLEFVSPL PHSYPGNVVLTDDLGVIEESLCECGKAGKRFKVIGRAKKAEVRGCGDVMSEKLTKKPSYKPLSQQEERLTIYHSPIFLDD TMSASQQLDQIFCSLKRKQKWLANQPLEAILGLINEARKSWSSTPELDPYRHTGLNFLADWCEPNRLKNLLDSALNGQRA FLDNFLPRKDISHSSQKAMPRGIVSHWLSGNVPLLGMFALVQSILSKNANILKVSASESQALPVLLATFKGLSYTTPGGY TIHGDDLLGTLAVVYFDRHQTKIAEKFSANADVRIAWGGREAIESVSGLPKKYNSQDILFGPKLSMMVVGSDALDSDKAI RKLIRRAATDSSVFDQFACASPHTIFVEKGGLITPKEFAEKLASAMDKALVRLPTQVPDIGQANKIRSKIAEYAFIGEYW HDKHLRWTVLFDEGIELVEPTYQRVITVKAVDNVFDVVDSVHEDIQTVGLAMNGEKRLRFANEIMLKGAMRCPDVGYMTH FDSPWDGVVALDRMVRWVTLGGPL
Specific function: LuxC is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the luxC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016162 - InterPro: IPR008670 [H]
Pfam domain/function: PF05893 LuxC [H]
EC number: =1.2.1.50 [H]
Molecular weight: Translated: 91825; Mature: 91693
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVNNENLTSVLDARPFELSEEQKSPLFKANLLAELVHHYQCNEMYRKFCQKNKFDPLVF CCCCCCCHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE DGEVADIPPIPVHIFKAIGHKLSSVSDDTIKAKLQSSATSGVPSTILLDKVTARRQTRAM CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ARVMQEVLGPKRRPFCIMDIDPTSPNATNLGARIAAVKGYLNFASTSKYFIDADSPSAPL HHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHH EFLEQKFVEHLNSLASEEPLIIFGFTFVLYHTVFKTLKDKGISFQLPKGSQVIHIGGWKK HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCHH LESEKVDKITFNRDIASVLGISPDDVVDIYGFTEQMGLNYPDCKAGWKHIHAYSDVIIRD HCCCCCCCEEECHHHHHHHCCCCCHHEECCCCHHHHCCCCCCHHHHHHHHHHHHCEEEEC ESNLEVCGPGKVGLLEFVSPLPHSYPGNVVLTDDLGVIEESLCECGKAGKRFKVIGRAKK CCCCEEECCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEECCCCHH AEVRGCGDVMSEKLTKKPSYKPLSQQEERLTIYHSPIFLDDTMSASQQLDQIFCSLKRKQ HHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEECCHHHHHHHHHHHHHHHHHHH KWLANQPLEAILGLINEARKSWSSTPELDPYRHTGLNFLADWCEPNRLKNLLDSALNGQR HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHCCHHHHHHHHHHHCCCCH AFLDNFLPRKDISHSSQKAMPRGIVSHWLSGNVPLLGMFALVQSILSKNANILKVSASES HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC QALPVLLATFKGLSYTTPGGYTIHGDDLLGTLAVVYFDRHQTKIAEKFSANADVRIAWGG CCHHHHHHHHCCCCEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC REAIESVSGLPKKYNSQDILFGPKLSMMVVGSDALDSDKAIRKLIRRAATDSSVFDQFAC HHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHC ASPHTIFVEKGGLITPKEFAEKLASAMDKALVRLPTQVPDIGQANKIRSKIAEYAFIGEY CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH WHDKHLRWTVLFDEGIELVEPTYQRVITVKAVDNVFDVVDSVHEDIQTVGLAMNGEKRLR HCCCCEEEEEEECCCCHHHCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHH FANEIMLKGAMRCPDVGYMTHFDSPWDGVVALDRMVRWVTLGGPL HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PVNNENLTSVLDARPFELSEEQKSPLFKANLLAELVHHYQCNEMYRKFCQKNKFDPLVF CCCCCCHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE DGEVADIPPIPVHIFKAIGHKLSSVSDDTIKAKLQSSATSGVPSTILLDKVTARRQTRAM CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ARVMQEVLGPKRRPFCIMDIDPTSPNATNLGARIAAVKGYLNFASTSKYFIDADSPSAPL HHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHH EFLEQKFVEHLNSLASEEPLIIFGFTFVLYHTVFKTLKDKGISFQLPKGSQVIHIGGWKK HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCHH LESEKVDKITFNRDIASVLGISPDDVVDIYGFTEQMGLNYPDCKAGWKHIHAYSDVIIRD HCCCCCCCEEECHHHHHHHCCCCCHHEECCCCHHHHCCCCCCHHHHHHHHHHHHCEEEEC ESNLEVCGPGKVGLLEFVSPLPHSYPGNVVLTDDLGVIEESLCECGKAGKRFKVIGRAKK CCCCEEECCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEECCCCHH AEVRGCGDVMSEKLTKKPSYKPLSQQEERLTIYHSPIFLDDTMSASQQLDQIFCSLKRKQ HHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEECCHHHHHHHHHHHHHHHHHHH KWLANQPLEAILGLINEARKSWSSTPELDPYRHTGLNFLADWCEPNRLKNLLDSALNGQR HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHCCHHHHHHHHHHHCCCCH AFLDNFLPRKDISHSSQKAMPRGIVSHWLSGNVPLLGMFALVQSILSKNANILKVSASES HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC QALPVLLATFKGLSYTTPGGYTIHGDDLLGTLAVVYFDRHQTKIAEKFSANADVRIAWGG CCHHHHHHHHCCCCEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC REAIESVSGLPKKYNSQDILFGPKLSMMVVGSDALDSDKAIRKLIRRAATDSSVFDQFAC HHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHC ASPHTIFVEKGGLITPKEFAEKLASAMDKALVRLPTQVPDIGQANKIRSKIAEYAFIGEY CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH WHDKHLRWTVLFDEGIELVEPTYQRVITVKAVDNVFDVVDSVHEDIQTVGLAMNGEKRLR HCCCCEEEEEEECCCCHHHCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHH FANEIMLKGAMRCPDVGYMTHFDSPWDGVVALDRMVRWVTLGGPL HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]