| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080467
Identifier: 227080467
GI number: 227080467
Start: 240493
End: 240735
Strand: Direct
Name: 227080467
Synonym: VCM66_0236
Alternate gene names: NA
Gene position: 240493-240735 (Clockwise)
Preceding gene: 227080466
Following gene: 227080468
Centisome position: 8.31
GC content: 33.33
Gene sequence:
>243_bases ATGGTTTATATGTCTATCTCTGAAGAAAAAATTATCAATCTTATTGCAGGAATTCTTGAAGTAGAAATTGGTATTATTAA TAAAGAACTTGCCGTTGGTGATATCCCTGAATGGGACTCGTTAGCTCACATGAGAATAATTGCGGCTCTTGAATCGGATT TGGGAGTAGTTTTGGATATCGAACAAGTTCTTGAAATAGAAGATGTTGAAGATATTATCGATGCTGTAATTAATAACGAG TAA
Upstream 100 bases:
>100_bases TTGTTTTCAATGGAACACCACAATCATGCATTGACTACTATTTAAACAGTGTCAAAAAATAATCAACTAGATAAAAAATA CAATCTTTTAACTATATTGG
Downstream 100 bases:
>100_bases ATATTATGTCTGTGGTTGAGAGAATATTTAACCATTCCGAGTCAAGACCGGATTGTATAGCGGTCTATGAAAATGATCGA ACAATTAGTTATGAAAATCT
Product: putative acyl carrier protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MVYMSISEEKIINLIAGILEVEIGIINKELAVGDIPEWDSLAHMRIIAALESDLGVVLDIEQVLEIEDVEDIIDAVINNE
Sequences:
>Translated_80_residues MVYMSISEEKIINLIAGILEVEIGIINKELAVGDIPEWDSLAHMRIIAALESDLGVVLDIEQVLEIEDVEDIIDAVINNE >Mature_80_residues MVYMSISEEKIINLIAGILEVEIGIINKELAVGDIPEWDSLAHMRIIAALESDLGVVLDIEQVLEIEDVEDIIDAVINNE
Specific function: Unknown
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8859; Mature: 8859
Theoretical pI: Translated: 3.52; Mature: 3.52
Prosite motif: PS50075 ACP_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYMSISEEKIINLIAGILEVEIGIINKELAVGDIPEWDSLAHMRIIAALESDLGVVLDI CEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEH EQVLEIEDVEDIIDAVINNE HHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure MVYMSISEEKIINLIAGILEVEIGIINKELAVGDIPEWDSLAHMRIIAALESDLGVVLDI CEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEH EQVLEIEDVEDIIDAVINNE HHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA