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The map label for this gene is 227080457

Identifier: 227080457

GI number: 227080457

Start: 227427

End: 228626

Strand: Reverse

Name: 227080457

Synonym: VCM66_0225

Alternate gene names: NA

Gene position: 228626-227427 (Counterclockwise)

Preceding gene: 227080458

Following gene: 227080456

Centisome position: 7.9

GC content: 35.33

Gene sequence:

>1200_bases
ATGAATAATAAAATAACTAAAACCTCAATTTTCCTTACTATCTCACTACTTTTAATTACACCGGGATTTTCTGTTGTAGC
GGTAGGATTACTGACTCTCTACTCTAGTGTTAAATTAATTAAAAATGGCTTAAACCTTAATAAATTCGACATTATTCCTC
TTATAACCCTGAGTGCGTATTTTTTGTCAAACTTACCAATTACCATTATTGATGGTGATACTTTAAGATATTTAGATGCA
GGCATTCGTGCTCTGTTATGTATACCTATGTACTTTTTCATTAAGAATGAAATTTCCAAAGGCGCAAATTTAGATAACAC
ACTATGCACATCAACCATATTGGCTTCTTTTGGTGCTTTAGCGTTTGCTTTTTATCAATTTTTCATATTAAACATGCCAC
GCGTTGATGGTTTTCTATTTAGTATCAACTTCGGTTATCTCGCAGCAGCTTTAGCTATCTTATCTTTTGGCTTGTCATTT
ACACAAACAAGATTCAAATATTATTTGTATCTCTCAGTTGTAGCTGCAACAGTGGCGACAATCTTAACCTTAACAAGAGG
AGCCATTTTAACGCTACTCTTTGTTTTCATCTTGTTCTTTATCGTCAATGTAAGAAAAATAAAATTTAAGCAAACCCTTG
TTTTTACTCTAATCAGTTTTTTATTAGTCTCAGTCAGTTATCAATTTTCACCGCGTATACAAGAACGGGTTGATTTTACA
ATTTTTGAAATATCCAGCATTGCCAGTAACAATATTCACGCTGCAGCTTCATCAGGGGGGCGACTTCAACTCTGGTATGC
CGCTGTTGAAGCATTTAAACACAATCCAATTTGGGGTACTACGTATTCGGAAAGAGAAAGCTTAAATATTGAACTTTTTA
AAGAAGGAAAAGTGGATGAATGGACGAGCACGGTGCCCAGAGGTCATGCACATAGCCAGTATTTTGAAGCTATAGCTAGT
AATGGAACATTGGGAATTCTGGCGATTTTCGCGATGCTTATCTTACCATTTGGGGTATTTTTAAACGACTATCGAAAAAC
AGGCTCTCCAATCAGCCAAACTGGATACCTTTTTGCCTTTGGGTTTATCATTTTCTGTTTAACTGAAGCACCACTACAAG
CCAACCTTATTGGAACTTTTTATGGCTTTATGGTGGCAATTTTTTATGCTTACATCGCAGCCAAAAGAGCAAAAAATTGA

Upstream 100 bases:

>100_bases
ACGGTAACAAAATCGATTGGCCAGTATTGCATTGCCGCGGGCAACCCAGCGAGAAAAATCAAAGACAATATTAGTTGGAA
CACGACCCTGAGCTATTAAA

Downstream 100 bases:

>100_bases
TGAAAATTCTTGTTATTGGCCCTTCTTGGGTTGGCGATATGGTCATGTCACAAAGCTTGTACCAGCGCCTAAAACAACAG
CATCCTGATGCACAAATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MNNKITKTSIFLTISLLLITPGFSVVAVGLLTLYSSVKLIKNGLNLNKFDIIPLITLSAYFLSNLPITIIDGDTLRYLDA
GIRALLCIPMYFFIKNEISKGANLDNTLCTSTILASFGALAFAFYQFFILNMPRVDGFLFSINFGYLAAALAILSFGLSF
TQTRFKYYLYLSVVAATVATILTLTRGAILTLLFVFILFFIVNVRKIKFKQTLVFTLISFLLVSVSYQFSPRIQERVDFT
IFEISSIASNNIHAAASSGGRLQLWYAAVEAFKHNPIWGTTYSERESLNIELFKEGKVDEWTSTVPRGHAHSQYFEAIAS
NGTLGILAIFAMLILPFGVFLNDYRKTGSPISQTGYLFAFGFIIFCLTEAPLQANLIGTFYGFMVAIFYAYIAAKRAKN

Sequences:

>Translated_399_residues
MNNKITKTSIFLTISLLLITPGFSVVAVGLLTLYSSVKLIKNGLNLNKFDIIPLITLSAYFLSNLPITIIDGDTLRYLDA
GIRALLCIPMYFFIKNEISKGANLDNTLCTSTILASFGALAFAFYQFFILNMPRVDGFLFSINFGYLAAALAILSFGLSF
TQTRFKYYLYLSVVAATVATILTLTRGAILTLLFVFILFFIVNVRKIKFKQTLVFTLISFLLVSVSYQFSPRIQERVDFT
IFEISSIASNNIHAAASSGGRLQLWYAAVEAFKHNPIWGTTYSERESLNIELFKEGKVDEWTSTVPRGHAHSQYFEAIAS
NGTLGILAIFAMLILPFGVFLNDYRKTGSPISQTGYLFAFGFIIFCLTEAPLQANLIGTFYGFMVAIFYAYIAAKRAKN
>Mature_399_residues
MNNKITKTSIFLTISLLLITPGFSVVAVGLLTLYSSVKLIKNGLNLNKFDIIPLITLSAYFLSNLPITIIDGDTLRYLDA
GIRALLCIPMYFFIKNEISKGANLDNTLCTSTILASFGALAFAFYQFFILNMPRVDGFLFSINFGYLAAALAILSFGLSF
TQTRFKYYLYLSVVAATVATILTLTRGAILTLLFVFILFFIVNVRKIKFKQTLVFTLISFLLVSVSYQFSPRIQERVDFT
IFEISSIASNNIHAAASSGGRLQLWYAAVEAFKHNPIWGTTYSERESLNIELFKEGKVDEWTSTVPRGHAHSQYFEAIAS
NGTLGILAIFAMLILPFGVFLNDYRKTGSPISQTGYLFAFGFIIFCLTEAPLQANLIGTFYGFMVAIFYAYIAAKRAKN

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44462; Mature: 44462

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKITKTSIFLTISLLLITPGFSVVAVGLLTLYSSVKLIKNGLNLNKFDIIPLITLSAY
CCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
FLSNLPITIIDGDTLRYLDAGIRALLCIPMYFFIKNEISKGANLDNTLCTSTILASFGAL
HHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AFAFYQFFILNMPRVDGFLFSINFGYLAAALAILSFGLSFTQTRFKYYLYLSVVAATVAT
HHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ILTLTRGAILTLLFVFILFFIVNVRKIKFKQTLVFTLISFLLVSVSYQFSPRIQERVDFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEE
IFEISSIASNNIHAAASSGGRLQLWYAAVEAFKHNPIWGTTYSERESLNIELFKEGKVDE
EEEHHHHCCCCCEEECCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCH
WTSTVPRGHAHSQYFEAIASNGTLGILAIFAMLILPFGVFLNDYRKTGSPISQTGYLFAF
HHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GFIIFCLTEAPLQANLIGTFYGFMVAIFYAYIAAKRAKN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNKITKTSIFLTISLLLITPGFSVVAVGLLTLYSSVKLIKNGLNLNKFDIIPLITLSAY
CCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
FLSNLPITIIDGDTLRYLDAGIRALLCIPMYFFIKNEISKGANLDNTLCTSTILASFGAL
HHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AFAFYQFFILNMPRVDGFLFSINFGYLAAALAILSFGLSFTQTRFKYYLYLSVVAATVAT
HHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ILTLTRGAILTLLFVFILFFIVNVRKIKFKQTLVFTLISFLLVSVSYQFSPRIQERVDFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEE
IFEISSIASNNIHAAASSGGRLQLWYAAVEAFKHNPIWGTTYSERESLNIELFKEGKVDE
EEEHHHHCCCCCEEECCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCH
WTSTVPRGHAHSQYFEAIASNGTLGILAIFAMLILPFGVFLNDYRKTGSPISQTGYLFAF
HHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GFIIFCLTEAPLQANLIGTFYGFMVAIFYAYIAAKRAKN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA