Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
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Accession | NC_012578 |
Length | 2,892,523 |
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The map label for this gene is 227080369
Identifier: 227080369
GI number: 227080369
Start: 128409
End: 128597
Strand: Direct
Name: 227080369
Synonym: VCM66_0133
Alternate gene names: NA
Gene position: 128409-128597 (Clockwise)
Preceding gene: 227080366
Following gene: 227080372
Centisome position: 4.44
GC content: 47.09
Gene sequence:
>189_bases TTGGCTCGAGATGGAATAGGGGATGTTTGGTCGCAAAAATTATCGCACAAACTGAAAGACAAGCTAAACCGTCACAGGGT TCAATTGACAGAGTGCAAACAAAGGAACGTATTGTTTGAGAGCGGTTTCGCCATTTTGCGCGGTGAGTGGCTAAGGAACG GTGCAGAAAATAGCCAACGGCAGCGTTAG
Upstream 100 bases:
>100_bases AGTCAGGCTCGACACTGACGGAGGTGGTGTTGGTGCACGCTTGCAACAGCATAGCGAGCGACATGGCGCAGAAGGGCAAG GCTCTCATTGATCAATTCCT
Downstream 100 bases:
>100_bases GCTGCCGTTGAGTGATGCTCAGGTGATGCGCTTTTACGGCTTAACCTGAGCGCAATAGGCACCGAGTGAGACGTGAATCG GGTTAAAACAGATGCTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MARDGIGDVWSQKLSHKLKDKLNRHRVQLTECKQRNVLFESGFAILRGEWLRNGAENSQRQR
Sequences:
>Translated_62_residues MARDGIGDVWSQKLSHKLKDKLNRHRVQLTECKQRNVLFESGFAILRGEWLRNGAENSQRQR >Mature_61_residues ARDGIGDVWSQKLSHKLKDKLNRHRVQLTECKQRNVLFESGFAILRGEWLRNGAENSQRQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7306; Mature: 7175
Theoretical pI: Translated: 11.22; Mature: 11.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDGIGDVWSQKLSHKLKDKLNRHRVQLTECKQRNVLFESGFAILRGEWLRNGAENSQR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCCCCC QR CC >Mature Secondary Structure ARDGIGDVWSQKLSHKLKDKLNRHRVQLTECKQRNVLFESGFAILRGEWLRNGAENSQR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCCCCC QR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA