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The map label for this gene is yhjA [H]

Identifier: 227080325

GI number: 227080325

Start: 86539

End: 87540

Strand: Direct

Name: yhjA [H]

Synonym: VCM66_0089

Alternate gene names: 227080325

Gene position: 86539-87540 (Clockwise)

Preceding gene: 227080324

Following gene: 227080329

Centisome position: 2.99

GC content: 47.7

Gene sequence:

>1002_bases
ATGAAAGTCGTTCTTACCTCGCTGAGCTTAGCGATATCCCTCTCCCTCGCTGGGTATGCTTTTGCGGCATCGCCAAGAAA
CGAACCTGTTTCCCCCATTTTACCTGCGCAGGAAATCCACATTGGAAAAGCCGAGTTGGGTAAAAAACTGTACTTTGATC
CGCGCTTATCCAAGTCAGGGTTTATCTCGTGTAACTCATGCCATAACTTGAGCATGGGCGGCAGTGATAACTTAAAAACG
TCCATCGGTCATAACTGGCAACAAGGTCCAATCAACTCACCGACTGTGCTCAATTCCAGTTTGAATATCGCCCAATTTTG
GGATGGTCGAGCGGCCGATCTGAAAGAGCAGGCGGGTGGGCCGATTGCCAATCCGGGTGAAATGGCTTTTACGCATACGT
TAGCCATTGATGTGTTGCAATCAATCCCAGCTTACGTGAGTGAGTTTCGTCTAGTGTTTGGTAAGCCAACCCTCGATATC
GATCAAGTGACTGAAGCGATTGCGGAGTTTGAAAAGACCTTAGTGACCCCATACTCACGTTTTGACCAATGGTTAATGGG
GGATGATAGCGCGATAACGGCTCAAGAGCTGGCAGGCTATGAATTGTTTAAAAACTCGGGCTGCGTGGCTTGTCATAACG
GCAGTGCGTTAGGTGGCAATTCGTTCCAAAAAATGGGTTTGATTGAACCGTATCAAACCAACAATAAAGTCGAAGGACTC
AGTGCGGTAACCGGCGCTGACGCCGATCGCTTTAAATTTAAAGTCCCGACACTGCGCAATGTGGCGTTAACGTATCCCTA
CTTCCATGACGGAGAAGCGGCCACGCTTAAAGACGCTGTGGATATCATGGGGCGTTTACAGCTAGGGCGTAAATTTACCG
ATGATGAAAACGGTAAGATAGTGGCTTTCTTGCATACCTTAACAGGAGAGCAACCAAGCTTTGCTTTACCCATTTTACCG
CCATCCAACGATAATACACCTAAGCCTCAGCCTTTTGATTAG

Upstream 100 bases:

>100_bases
AACGCTTAGAGCATAGATTCAGTTGCACATCAGGAGCCGTAACACATGTCAGCAACGTAAAGCCACAATAAAACCAATAA
CATAAAACAAGGAAGCCATT

Downstream 100 bases:

>100_bases
TTGAGGTAAGCGCCTGCTGGCTCGGTGTTTTACCTGCCAGCGGGCTTTGCTATGTTTCGGGATGGCGATATCTAAACAGC
TGCTACTTAAACGATCGGAG

Product: cytochrome c551 peroxidase

Products: NA

Alternate protein names: Cytochrome c peroxidase [H]

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MKVVLTSLSLAISLSLAGYAFAASPRNEPVSPILPAQEIHIGKAELGKKLYFDPRLSKSGFISCNSCHNLSMGGSDNLKT
SIGHNWQQGPINSPTVLNSSLNIAQFWDGRAADLKEQAGGPIANPGEMAFTHTLAIDVLQSIPAYVSEFRLVFGKPTLDI
DQVTEAIAEFEKTLVTPYSRFDQWLMGDDSAITAQELAGYELFKNSGCVACHNGSALGGNSFQKMGLIEPYQTNNKVEGL
SAVTGADADRFKFKVPTLRNVALTYPYFHDGEAATLKDAVDIMGRLQLGRKFTDDENGKIVAFLHTLTGEQPSFALPILP
PSNDNTPKPQPFD

Sequences:

>Translated_333_residues
MKVVLTSLSLAISLSLAGYAFAASPRNEPVSPILPAQEIHIGKAELGKKLYFDPRLSKSGFISCNSCHNLSMGGSDNLKT
SIGHNWQQGPINSPTVLNSSLNIAQFWDGRAADLKEQAGGPIANPGEMAFTHTLAIDVLQSIPAYVSEFRLVFGKPTLDI
DQVTEAIAEFEKTLVTPYSRFDQWLMGDDSAITAQELAGYELFKNSGCVACHNGSALGGNSFQKMGLIEPYQTNNKVEGL
SAVTGADADRFKFKVPTLRNVALTYPYFHDGEAATLKDAVDIMGRLQLGRKFTDDENGKIVAFLHTLTGEQPSFALPILP
PSNDNTPKPQPFD
>Mature_333_residues
MKVVLTSLSLAISLSLAGYAFAASPRNEPVSPILPAQEIHIGKAELGKKLYFDPRLSKSGFISCNSCHNLSMGGSDNLKT
SIGHNWQQGPINSPTVLNSSLNIAQFWDGRAADLKEQAGGPIANPGEMAFTHTLAIDVLQSIPAYVSEFRLVFGKPTLDI
DQVTEAIAEFEKTLVTPYSRFDQWLMGDDSAITAQELAGYELFKNSGCVACHNGSALGGNSFQKMGLIEPYQTNNKVEGL
SAVTGADADRFKFKVPTLRNVALTYPYFHDGEAATLKDAVDIMGRLQLGRKFTDDENGKIVAFLHTLTGEQPSFALPILP
PSNDNTPKPQPFD

Specific function: Unknown

COG id: COG1858

COG function: function code P; Cytochrome c peroxidase

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789935, Length=288, Percent_Identity=48.2638888888889, Blast_Score=254, Evalue=5e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR004852 [H]

Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]

EC number: =1.11.1.5 [H]

Molecular weight: Translated: 36040; Mature: 36040

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVLTSLSLAISLSLAGYAFAASPRNEPVSPILPAQEIHIGKAELGKKLYFDPRLSKSG
CEEEEEEEEEEEEEEECCEEEECCCCCCCCCCCCCHHHEECCHHHHCCEEEECCCCCCCC
FISCNSCHNLSMGGSDNLKTSIGHNWQQGPINSPTVLNSSLNIAQFWDGRAADLKEQAGG
CEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEECCCCCHHHHCCCCHHHHHHHCCC
PIANPGEMAFTHTLAIDVLQSIPAYVSEFRLVFGKPTLDIDQVTEAIAEFEKTLVTPYSR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCHHH
FDQWLMGDDSAITAQELAGYELFKNSGCVACHNGSALGGNSFQKMGLIEPYQTNNKVEGL
HHHHHCCCCCCCCHHHHHCHHHHCCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCC
SAVTGADADRFKFKVPTLRNVALTYPYFHDGEAATLKDAVDIMGRLQLGRKFTDDENGKI
HHCCCCCCCCEEEECCCCCCEEEECCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEE
VAFLHTLTGEQPSFALPILPPSNDNTPKPQPFD
EEEEEECCCCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKVVLTSLSLAISLSLAGYAFAASPRNEPVSPILPAQEIHIGKAELGKKLYFDPRLSKSG
CEEEEEEEEEEEEEEECCEEEECCCCCCCCCCCCCHHHEECCHHHHCCEEEECCCCCCCC
FISCNSCHNLSMGGSDNLKTSIGHNWQQGPINSPTVLNSSLNIAQFWDGRAADLKEQAGG
CEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEECCCCCHHHHCCCCHHHHHHHCCC
PIANPGEMAFTHTLAIDVLQSIPAYVSEFRLVFGKPTLDIDQVTEAIAEFEKTLVTPYSR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCHHH
FDQWLMGDDSAITAQELAGYELFKNSGCVACHNGSALGGNSFQKMGLIEPYQTNNKVEGL
HHHHHCCCCCCCCHHHHHCHHHHCCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCC
SAVTGADADRFKFKVPTLRNVALTYPYFHDGEAATLKDAVDIMGRLQLGRKFTDDENGKI
HHCCCCCCCCEEEECCCCCCEEEECCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEE
VAFLHTLTGEQPSFALPILPPSNDNTPKPQPFD
EEEEEECCCCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12700255; 8163487 [H]