Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
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Accession | NC_012578 |
Length | 2,892,523 |
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The map label for this gene is 227080310
Identifier: 227080310
GI number: 227080310
Start: 74746
End: 75135
Strand: Direct
Name: 227080310
Synonym: VCM66_0074
Alternate gene names: NA
Gene position: 74746-75135 (Clockwise)
Preceding gene: 227080309
Following gene: 227080313
Centisome position: 2.58
GC content: 50.77
Gene sequence:
>390_bases GTGGTTGTGGCTAAACGTCTATGCAAACTCAGTCGTCATGAGATTGCGACTTCCCTAAGTGAAATTGAGCGTCTGGTCGC TGAGCCGCAGTTTTTGTGTCGGGCTTGTGCGCGCGTGGCGGGGGATAAAAAAAGCTTGTGTAAACCGCAAGCCATGAGTC TTCCGGCGCCCGTAGCGACTGTGGTGGCACTTCCTGCTCATGAAAGTGGGGTGGTCAGCCTGCTTCCCAAAGCCAGCCTT AAAAAGCAGCGCAAATTCCACAAAAAGCTGGAAAAAGTGCTTAAAAAGCAGCGTAAGTTAATGAAAAAGCAGCAACTGCT AGAAGGCAAAGTTGGACAAAGGCATCCAACACCAGTGGTAGAGAGAGCGACAGCGCAGAGCATGCATTGA
Upstream 100 bases:
>100_bases CCGCTTTGCTCACGAAGCGAGGGCACACCACAATCTGACTTGTGTTTTTGGATGAAGGACGTAATATCTGCGTCTGAGAA TAATTCGTATTTTAGCTGGA
Downstream 100 bases:
>100_bases GCTGAATCATTGCGCTGAAGTGTCAACTATCGCAGACCTAAAAAAGCCCATCTCCGATGGGCTTTTGCGTCTCTTGATGA GTCATTTCATCTCGGTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MVVAKRLCKLSRHEIATSLSEIERLVAEPQFLCRACARVAGDKKSLCKPQAMSLPAPVATVVALPAHESGVVSLLPKASL KKQRKFHKKLEKVLKKQRKLMKKQQLLEGKVGQRHPTPVVERATAQSMH
Sequences:
>Translated_129_residues MVVAKRLCKLSRHEIATSLSEIERLVAEPQFLCRACARVAGDKKSLCKPQAMSLPAPVATVVALPAHESGVVSLLPKASL KKQRKFHKKLEKVLKKQRKLMKKQQLLEGKVGQRHPTPVVERATAQSMH >Mature_129_residues MVVAKRLCKLSRHEIATSLSEIERLVAEPQFLCRACARVAGDKKSLCKPQAMSLPAPVATVVALPAHESGVVSLLPKASL KKQRKFHKKLEKVLKKQRKLMKKQQLLEGKVGQRHPTPVVERATAQSMH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14335; Mature: 14335
Theoretical pI: Translated: 11.17; Mature: 11.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVAKRLCKLSRHEIATSLSEIERLVAEPQFLCRACARVAGDKKSLCKPQAMSLPAPVAT CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHCCCHHHCCCCHHHH VVALPAHESGVVSLLPKASLKKQRKFHKKLEKVLKKQRKLMKKQQLLEGKVGQRHPTPVV HHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH ERATAQSMH HHHHHHCCC >Mature Secondary Structure MVVAKRLCKLSRHEIATSLSEIERLVAEPQFLCRACARVAGDKKSLCKPQAMSLPAPVAT CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHCCCHHHCCCCHHHH VVALPAHESGVVSLLPKASLKKQRKFHKKLEKVLKKQRKLMKKQQLLEGKVGQRHPTPVV HHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH ERATAQSMH HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA