Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
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Accession | NC_012578 |
Length | 2,892,523 |
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The map label for this gene is yhiQ [C]
Identifier: 227080309
GI number: 227080309
Start: 73750
End: 74628
Strand: Direct
Name: yhiQ [C]
Synonym: VCM66_0073
Alternate gene names: 227080309
Gene position: 73750-74628 (Clockwise)
Preceding gene: 227080308
Following gene: 227080310
Centisome position: 2.55
GC content: 52.22
Gene sequence:
>879_bases TTGGGTTGCCGAGCAACTCAAAGAGAAAGCGTAGGGTTTGCCGATAAAATCCGCTACACTGAGCGCCGTTTTATCTCGGT TTTCGGAGTTCCCTTGTTGATTCAACTGATTTGCCAAGCGCCTCAACGTGCGCAAGAGTTGGAGCAGATTGCTGCGCGTT GGCAACTGCAAGCCAGTGATGATAGCCCATTTGCTTTGGTACTCAGCGAAGAGCGCCTTGAGCTACGCAAATTAGATGAA CCTAAACTGGGGGCCATTTACGTCGATTGGGTAGAAGGTGCAGTCGCACACCGCCGCAAATTTGGTGGTGGTAAAGGGCA ATCGATCGCCAAAGCGGCTGGGCTAAATAAAGGCGTCACGCCAGTGGTTTTAGATGCAACGGCGGGTTTAGGCCGTGATG CGTTTGTGTTGGCGTCCTTGGGCTGTCGGGTACAGATGGTAGAACGACATCCTGTGGTTGCCGCCTTACTGGAAGATGGT TTACAGCGCGCCAAACAAGATGATGAAATCGGTGCCTGGGTCAGTGAGCGCATCAGTCTGCTGCACGCCTCAAGCCATGA TGCACTGCAGCAATTGGCCTCCGATCCGAATTTTACTTCGCCCGATGTGGTCTACCTCGACCCCATGTATCCACACCCCG AAAATAAGAAAAAAACCGCCTTGGTCAAAAAAGAGATGCGCGTATTTCAGTCTCTGGTGGGGGCGGATAATGATGCCGAT GCTCTGCTTGAACCTGCGTTGCAACTGGCGCAAAAACGGGTTGTGGTTAAGCGGCCTGATTACGCGCCGTGGCTGGGTAA TCGAAAACCGAGCATGGCGATGGAAACCAAGAAAAACCGGTTTGATGTTTATGTGATTGCCGCGATGAGTGGCGAATAG
Upstream 100 bases:
>100_bases CGGAGTTTGTTGAAAACCAGCAGATACTTGAGGCTTTGCAGCAGATTGGTGTGGATTACGCGCAAGGCTATCTATTCAGC CGCCCACAACCGATCGCTGA
Downstream 100 bases:
>100_bases CGCGCTGGCCAATCAAGCCGCTTTGCTCACGAAGCGAGGGCACACCACAATCTGACTTGTGTTTTTGGATGAAGGACGTA ATATCTGCGTCTGAGAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MGCRATQRESVGFADKIRYTERRFISVFGVPLLIQLICQAPQRAQELEQIAARWQLQASDDSPFALVLSEERLELRKLDE PKLGAIYVDWVEGAVAHRRKFGGGKGQSIAKAAGLNKGVTPVVLDATAGLGRDAFVLASLGCRVQMVERHPVVAALLEDG LQRAKQDDEIGAWVSERISLLHASSHDALQQLASDPNFTSPDVVYLDPMYPHPENKKKTALVKKEMRVFQSLVGADNDAD ALLEPALQLAQKRVVVKRPDYAPWLGNRKPSMAMETKKNRFDVYVIAAMSGE
Sequences:
>Translated_292_residues MGCRATQRESVGFADKIRYTERRFISVFGVPLLIQLICQAPQRAQELEQIAARWQLQASDDSPFALVLSEERLELRKLDE PKLGAIYVDWVEGAVAHRRKFGGGKGQSIAKAAGLNKGVTPVVLDATAGLGRDAFVLASLGCRVQMVERHPVVAALLEDG LQRAKQDDEIGAWVSERISLLHASSHDALQQLASDPNFTSPDVVYLDPMYPHPENKKKTALVKKEMRVFQSLVGADNDAD ALLEPALQLAQKRVVVKRPDYAPWLGNRKPSMAMETKKNRFDVYVIAAMSGE >Mature_291_residues GCRATQRESVGFADKIRYTERRFISVFGVPLLIQLICQAPQRAQELEQIAARWQLQASDDSPFALVLSEERLELRKLDEP KLGAIYVDWVEGAVAHRRKFGGGKGQSIAKAAGLNKGVTPVVLDATAGLGRDAFVLASLGCRVQMVERHPVVAALLEDGL QRAKQDDEIGAWVSERISLLHASSHDALQQLASDPNFTSPDVVYLDPMYPHPENKKKTALVKKEMRVFQSLVGADNDADA LLEPALQLAQKRVVVKRPDYAPWLGNRKPSMAMETKKNRFDVYVIAAMSGE
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0341 family [H]
Homologues:
Organism=Escherichia coli, GI1789912, Length=251, Percent_Identity=61.3545816733068, Blast_Score=291, Evalue=3e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007536 [H]
Pfam domain/function: PF04445 DUF548 [H]
EC number: NA
Molecular weight: Translated: 32287; Mature: 32156
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCRATQRESVGFADKIRYTERRFISVFGVPLLIQLICQAPQRAQELEQIAARWQLQASD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCC DSPFALVLSEERLELRKLDEPKLGAIYVDWVEGAVAHRRKFGGGKGQSIAKAAGLNKGVT CCCEEEEEEHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC PVVLDATAGLGRDAFVLASLGCRVQMVERHPVVAALLEDGLQRAKQDDEIGAWVSERISL EEEEECCCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LHASSHDALQQLASDPNFTSPDVVYLDPMYPHPENKKKTALVKKEMRVFQSLVGADNDAD HHCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH ALLEPALQLAQKRVVVKRPDYAPWLGNRKPSMAMETKKNRFDVYVIAAMSGE HHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEECCC >Mature Secondary Structure GCRATQRESVGFADKIRYTERRFISVFGVPLLIQLICQAPQRAQELEQIAARWQLQASD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCC DSPFALVLSEERLELRKLDEPKLGAIYVDWVEGAVAHRRKFGGGKGQSIAKAAGLNKGVT CCCEEEEEEHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC PVVLDATAGLGRDAFVLASLGCRVQMVERHPVVAALLEDGLQRAKQDDEIGAWVSERISL EEEEECCCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LHASSHDALQQLASDPNFTSPDVVYLDPMYPHPENKKKTALVKKEMRVFQSLVGADNDAD HHCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH ALLEPALQLAQKRVVVKRPDYAPWLGNRKPSMAMETKKNRFDVYVIAAMSGE HHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]