Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

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The map label for this gene is yhiQ [C]

Identifier: 227080309

GI number: 227080309

Start: 73750

End: 74628

Strand: Direct

Name: yhiQ [C]

Synonym: VCM66_0073

Alternate gene names: 227080309

Gene position: 73750-74628 (Clockwise)

Preceding gene: 227080308

Following gene: 227080310

Centisome position: 2.55

GC content: 52.22

Gene sequence:

>879_bases
TTGGGTTGCCGAGCAACTCAAAGAGAAAGCGTAGGGTTTGCCGATAAAATCCGCTACACTGAGCGCCGTTTTATCTCGGT
TTTCGGAGTTCCCTTGTTGATTCAACTGATTTGCCAAGCGCCTCAACGTGCGCAAGAGTTGGAGCAGATTGCTGCGCGTT
GGCAACTGCAAGCCAGTGATGATAGCCCATTTGCTTTGGTACTCAGCGAAGAGCGCCTTGAGCTACGCAAATTAGATGAA
CCTAAACTGGGGGCCATTTACGTCGATTGGGTAGAAGGTGCAGTCGCACACCGCCGCAAATTTGGTGGTGGTAAAGGGCA
ATCGATCGCCAAAGCGGCTGGGCTAAATAAAGGCGTCACGCCAGTGGTTTTAGATGCAACGGCGGGTTTAGGCCGTGATG
CGTTTGTGTTGGCGTCCTTGGGCTGTCGGGTACAGATGGTAGAACGACATCCTGTGGTTGCCGCCTTACTGGAAGATGGT
TTACAGCGCGCCAAACAAGATGATGAAATCGGTGCCTGGGTCAGTGAGCGCATCAGTCTGCTGCACGCCTCAAGCCATGA
TGCACTGCAGCAATTGGCCTCCGATCCGAATTTTACTTCGCCCGATGTGGTCTACCTCGACCCCATGTATCCACACCCCG
AAAATAAGAAAAAAACCGCCTTGGTCAAAAAAGAGATGCGCGTATTTCAGTCTCTGGTGGGGGCGGATAATGATGCCGAT
GCTCTGCTTGAACCTGCGTTGCAACTGGCGCAAAAACGGGTTGTGGTTAAGCGGCCTGATTACGCGCCGTGGCTGGGTAA
TCGAAAACCGAGCATGGCGATGGAAACCAAGAAAAACCGGTTTGATGTTTATGTGATTGCCGCGATGAGTGGCGAATAG

Upstream 100 bases:

>100_bases
CGGAGTTTGTTGAAAACCAGCAGATACTTGAGGCTTTGCAGCAGATTGGTGTGGATTACGCGCAAGGCTATCTATTCAGC
CGCCCACAACCGATCGCTGA

Downstream 100 bases:

>100_bases
CGCGCTGGCCAATCAAGCCGCTTTGCTCACGAAGCGAGGGCACACCACAATCTGACTTGTGTTTTTGGATGAAGGACGTA
ATATCTGCGTCTGAGAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MGCRATQRESVGFADKIRYTERRFISVFGVPLLIQLICQAPQRAQELEQIAARWQLQASDDSPFALVLSEERLELRKLDE
PKLGAIYVDWVEGAVAHRRKFGGGKGQSIAKAAGLNKGVTPVVLDATAGLGRDAFVLASLGCRVQMVERHPVVAALLEDG
LQRAKQDDEIGAWVSERISLLHASSHDALQQLASDPNFTSPDVVYLDPMYPHPENKKKTALVKKEMRVFQSLVGADNDAD
ALLEPALQLAQKRVVVKRPDYAPWLGNRKPSMAMETKKNRFDVYVIAAMSGE

Sequences:

>Translated_292_residues
MGCRATQRESVGFADKIRYTERRFISVFGVPLLIQLICQAPQRAQELEQIAARWQLQASDDSPFALVLSEERLELRKLDE
PKLGAIYVDWVEGAVAHRRKFGGGKGQSIAKAAGLNKGVTPVVLDATAGLGRDAFVLASLGCRVQMVERHPVVAALLEDG
LQRAKQDDEIGAWVSERISLLHASSHDALQQLASDPNFTSPDVVYLDPMYPHPENKKKTALVKKEMRVFQSLVGADNDAD
ALLEPALQLAQKRVVVKRPDYAPWLGNRKPSMAMETKKNRFDVYVIAAMSGE
>Mature_291_residues
GCRATQRESVGFADKIRYTERRFISVFGVPLLIQLICQAPQRAQELEQIAARWQLQASDDSPFALVLSEERLELRKLDEP
KLGAIYVDWVEGAVAHRRKFGGGKGQSIAKAAGLNKGVTPVVLDATAGLGRDAFVLASLGCRVQMVERHPVVAALLEDGL
QRAKQDDEIGAWVSERISLLHASSHDALQQLASDPNFTSPDVVYLDPMYPHPENKKKTALVKKEMRVFQSLVGADNDADA
LLEPALQLAQKRVVVKRPDYAPWLGNRKPSMAMETKKNRFDVYVIAAMSGE

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0341 family [H]

Homologues:

Organism=Escherichia coli, GI1789912, Length=251, Percent_Identity=61.3545816733068, Blast_Score=291, Evalue=3e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007536 [H]

Pfam domain/function: PF04445 DUF548 [H]

EC number: NA

Molecular weight: Translated: 32287; Mature: 32156

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCRATQRESVGFADKIRYTERRFISVFGVPLLIQLICQAPQRAQELEQIAARWQLQASD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCC
DSPFALVLSEERLELRKLDEPKLGAIYVDWVEGAVAHRRKFGGGKGQSIAKAAGLNKGVT
CCCEEEEEEHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC
PVVLDATAGLGRDAFVLASLGCRVQMVERHPVVAALLEDGLQRAKQDDEIGAWVSERISL
EEEEECCCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LHASSHDALQQLASDPNFTSPDVVYLDPMYPHPENKKKTALVKKEMRVFQSLVGADNDAD
HHCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH
ALLEPALQLAQKRVVVKRPDYAPWLGNRKPSMAMETKKNRFDVYVIAAMSGE
HHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEECCC
>Mature Secondary Structure 
GCRATQRESVGFADKIRYTERRFISVFGVPLLIQLICQAPQRAQELEQIAARWQLQASD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCC
DSPFALVLSEERLELRKLDEPKLGAIYVDWVEGAVAHRRKFGGGKGQSIAKAAGLNKGVT
CCCEEEEEEHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC
PVVLDATAGLGRDAFVLASLGCRVQMVERHPVVAALLEDGLQRAKQDDEIGAWVSERISL
EEEEECCCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LHASSHDALQQLASDPNFTSPDVVYLDPMYPHPENKKKTALVKKEMRVFQSLVGADNDAD
HHCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH
ALLEPALQLAQKRVVVKRPDYAPWLGNRKPSMAMETKKNRFDVYVIAAMSGE
HHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]