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The map label for this gene is 226951061

Identifier: 226951061

GI number: 226951061

Start: 4118641

End: 4119627

Strand: Direct

Name: 226951061

Synonym: CLM_4100

Alternate gene names: NA

Gene position: 4118641-4119627 (Clockwise)

Preceding gene: 226951044

Following gene: 226951062

Centisome position: 99.12

GC content: 26.44

Gene sequence:

>987_bases
TTGAGTACTTTTGTATTTAAGAACAATAGTTGGAATTATACTCCTGTAAGTAACATTTTCATAGACAAATTTATGCCTAA
AGCCCGAGGAGAATTCGTAAAAGTATATCTTCTAGGGCTAAAATATTGTATGTCAGGAGAAATAGGTGTAAGTTCTGAAA
TAATAGCTAGTACATTACATTTATTACAAACTGACGTAATGAATGCTTGGAATTTTTGGAATGATGAAGGTGTAATAAAG
ATAAACCCTATAGATAATATGGGTAATTACAATATAGAATTTTTAACTTTAGAAGATAGTAAAGCCCCTGAGGATAACAT
AAATTTATTAGAAGAATTAAATAATAATTCTGTAAAAGACATGCTTCAGGACATAGAAAAACTTTTATCTCGTCCTTTAT
CCTCTAAAGAAATGACTGTTTATATAGAATGGATAAAAGACTACAATTTTTCTCCTGAAATAATATTATTATTAATTCAA
TATTGTGTATCTAAAGGGAAAACTGACTGGAGATATATAGAAAAAATAGCTTTAGGCTGGTTTGATGCTAAAATACAAAC
TATAGATGATGCTCAAATGTATATAAAAAAACATGAGGATAAATGGATTAAAATAAGAAAAATCCTAAATTATTTAGGAG
CAAAAGATGGCGAAATAATGAAACCTCAAGAAGAAATTTTGGATAAGTGGATTAATATATATAATTTTCCTTTAGATGTT
ATCTTTAAAGCTTGTGATATTTGTTTTCAAAGAATAAATAAAGGAGACTTTAGATATATTGATGGAATATTAAATAGCTG
GCATAAAGAGGGTTTAAAAACCTTACAGGATGTTACACTAAAAGATAACAATAAAAAAACATACAAAAAAGAAAACAAAA
ATTATAGTACTCCGGCTAAAAAAGATAAGTTTAATGATTTTGAACAAAGAAACTATGATTTTGAGGAACTAGAAAAAAAA
TTATTAGGATGGGATAATAATGATTAA

Upstream 100 bases:

>100_bases
TTATATAATTATTCTCCAGTGCACCTATTATTGTAATAATATTTATAGTTTGATATAATGTATTAATGTTAATAATAATC
AAAAGGTAGGTGATACACCT

Downstream 100 bases:

>100_bases
AGGTTATAAATCAGAAATCCTAAAAGAATATGAAAAAATTAGAGAAAAGGAATCCTTAGCTCTAAAAAATAGAAGAAAAG
AAATAAAAATGAAATTACCT

Product: putative DNA replication protein DnaD

Products: NA

Alternate protein names: DNA Replication Protein DnaD; DNAD And Phage-Associated Domain Protein; Chromosome Replication Initiation Protein; DNA Replication Protein; Primosome Protein DNAD; DNAD And Phage-Associated Domain-Containing Protein

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSTFVFKNNSWNYTPVSNIFIDKFMPKARGEFVKVYLLGLKYCMSGEIGVSSEIIASTLHLLQTDVMNAWNFWNDEGVIK
INPIDNMGNYNIEFLTLEDSKAPEDNINLLEELNNNSVKDMLQDIEKLLSRPLSSKEMTVYIEWIKDYNFSPEIILLLIQ
YCVSKGKTDWRYIEKIALGWFDAKIQTIDDAQMYIKKHEDKWIKIRKILNYLGAKDGEIMKPQEEILDKWINIYNFPLDV
IFKACDICFQRINKGDFRYIDGILNSWHKEGLKTLQDVTLKDNNKKTYKKENKNYSTPAKKDKFNDFEQRNYDFEELEKK
LLGWDNND

Sequences:

>Translated_328_residues
MSTFVFKNNSWNYTPVSNIFIDKFMPKARGEFVKVYLLGLKYCMSGEIGVSSEIIASTLHLLQTDVMNAWNFWNDEGVIK
INPIDNMGNYNIEFLTLEDSKAPEDNINLLEELNNNSVKDMLQDIEKLLSRPLSSKEMTVYIEWIKDYNFSPEIILLLIQ
YCVSKGKTDWRYIEKIALGWFDAKIQTIDDAQMYIKKHEDKWIKIRKILNYLGAKDGEIMKPQEEILDKWINIYNFPLDV
IFKACDICFQRINKGDFRYIDGILNSWHKEGLKTLQDVTLKDNNKKTYKKENKNYSTPAKKDKFNDFEQRNYDFEELEKK
LLGWDNND
>Mature_327_residues
STFVFKNNSWNYTPVSNIFIDKFMPKARGEFVKVYLLGLKYCMSGEIGVSSEIIASTLHLLQTDVMNAWNFWNDEGVIKI
NPIDNMGNYNIEFLTLEDSKAPEDNINLLEELNNNSVKDMLQDIEKLLSRPLSSKEMTVYIEWIKDYNFSPEIILLLIQY
CVSKGKTDWRYIEKIALGWFDAKIQTIDDAQMYIKKHEDKWIKIRKILNYLGAKDGEIMKPQEEILDKWINIYNFPLDVI
FKACDICFQRINKGDFRYIDGILNSWHKEGLKTLQDVTLKDNNKKTYKKENKNYSTPAKKDKFNDFEQRNYDFEELEKKL
LGWDNND

Specific function: Unknown

COG id: COG3935

COG function: function code L; Putative primosome component and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38743; Mature: 38612

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFVFKNNSWNYTPVSNIFIDKFMPKARGEFVKVYLLGLKYCMSGEIGVSSEIIASTLH
CCEEEEECCCCCCCCHHHHHHHHHCCHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LLQTDVMNAWNFWNDEGVIKINPIDNMGNYNIEFLTLEDSKAPEDNINLLEELNNNSVKD
HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHH
MLQDIEKLLSRPLSSKEMTVYIEWIKDYNFSPEIILLLIQYCVSKGKTDWRYIEKIALGW
HHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FDAKIQTIDDAQMYIKKHEDKWIKIRKILNYLGAKDGEIMKPQEEILDKWINIYNFPLDV
HCCCEEECHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHH
IFKACDICFQRINKGDFRYIDGILNSWHKEGLKTLQDVTLKDNNKKTYKKENKNYSTPAK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCC
KDKFNDFEQRNYDFEELEKKLLGWDNND
CCCCCCHHHCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STFVFKNNSWNYTPVSNIFIDKFMPKARGEFVKVYLLGLKYCMSGEIGVSSEIIASTLH
CEEEEECCCCCCCCHHHHHHHHHCCHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LLQTDVMNAWNFWNDEGVIKINPIDNMGNYNIEFLTLEDSKAPEDNINLLEELNNNSVKD
HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHH
MLQDIEKLLSRPLSSKEMTVYIEWIKDYNFSPEIILLLIQYCVSKGKTDWRYIEKIALGW
HHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FDAKIQTIDDAQMYIKKHEDKWIKIRKILNYLGAKDGEIMKPQEEILDKWINIYNFPLDV
HCCCEEECHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHH
IFKACDICFQRINKGDFRYIDGILNSWHKEGLKTLQDVTLKDNNKKTYKKENKNYSTPAK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCC
KDKFNDFEQRNYDFEELEKKLLGWDNND
CCCCCCHHHCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA