Click here to switch to the map view.

The map label for this gene is dnaC [H]

Identifier: 226951062

GI number: 226951062

Start: 4119620

End: 4120597

Strand: Direct

Name: dnaC [H]

Synonym: CLM_4101

Alternate gene names: 226951062

Gene position: 4119620-4120597 (Clockwise)

Preceding gene: 226951061

Following gene: 226951065

Centisome position: 99.14

GC content: 22.6

Gene sequence:

>978_bases
ATGATTAAAGGTTATAAATCAGAAATCCTAAAAGAATATGAAAAAATTAGAGAAAAGGAATCCTTAGCTCTAAAAAATAG
AAGAAAAGAAATAAAAATGAAATTACCTAAAGTATTAGAACTTGAACAAGAAATAGCTAAACTTTCTATAGAAATGTCTA
TAAATATATTAAAAAATCCTGACAAATCAGAAGAGTATATTAATATAATAAAAAACAAAATAACAGACTTAAGAGTAAAA
AAGTCTGAATTTCTTGTTAGTAATGGTTATGATATGGATTTCTTAGAAATGCACTACAACTGTAATACATGTAAGGATAC
AGGTTTTGTAAATAACAAGAGGTGTTCCTGTTATAAACAAAAATTAATAAAGCTATATTATAATGATTCAGATTTAAAAC
ATATACTTAAAACAAACAATTTTGATAATTTTAACTTTGAATACTTTACTAATGAAAAAACAGATTTTCATTCTGATACA
CCACGAAAAAACATAAAAAAAATCTTAGATAAAATGTGGCATTTTATAGAAAACTTCAACAAAACAGATGAAAATTTTAT
GTTTATTGGTAATCCTGGTACAGGTAAAACATTTTTATCTAATTGCATCGCCAAGGAACTTTTAGATAGAGGTAATTTTG
TAGTTTATAGAACCGCTGATGAATTAATACAAAACTTAAGATCTATTAAATTCAATAATGATAAACACTTAGAAGATATT
ATTATAAACTGTGATTTACTTATAATAGATGATTTAGGCACAGAATCAATAAATGAATTTTCAAAAGTAGAGTTATTTAA
TTTCATAAATAAAAAACTTCTTATGAGAAAAAAAATGATGATATCATCAAACTACAGTATAGAATCAATTTTAAAAAATT
ATTCTGAGAGAATATCCTCACGACTTCTTGGAAATTTTACATTATTTAAATTTTATTGTGATGATATAAGAATACAAAAA
AATATACAAAATAAATAA

Upstream 100 bases:

>100_bases
AATTATAGTACTCCGGCTAAAAAAGATAAGTTTAATGATTTTGAACAAAGAAACTATGATTTTGAGGAACTAGAAAAAAA
ATTATTAGGATGGGATAATA

Downstream 100 bases:

>100_bases
AGTAGCTAGATTTCTAGCTACTTTACTCTATATGTATAATAAATAATAAAAACTATATACAATCAACTTTGAAAGCATAT
AGTCCTTTAACTGGAGCTGG

Product: DNA replication protein DnaC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MIKGYKSEILKEYEKIREKESLALKNRRKEIKMKLPKVLELEQEIAKLSIEMSINILKNPDKSEEYINIIKNKITDLRVK
KSEFLVSNGYDMDFLEMHYNCNTCKDTGFVNNKRCSCYKQKLIKLYYNDSDLKHILKTNNFDNFNFEYFTNEKTDFHSDT
PRKNIKKILDKMWHFIENFNKTDENFMFIGNPGTGKTFLSNCIAKELLDRGNFVVYRTADELIQNLRSIKFNNDKHLEDI
IINCDLLIIDDLGTESINEFSKVELFNFINKKLLMRKKMMISSNYSIESILKNYSERISSRLLGNFTLFKFYCDDIRIQK
NIQNK

Sequences:

>Translated_325_residues
MIKGYKSEILKEYEKIREKESLALKNRRKEIKMKLPKVLELEQEIAKLSIEMSINILKNPDKSEEYINIIKNKITDLRVK
KSEFLVSNGYDMDFLEMHYNCNTCKDTGFVNNKRCSCYKQKLIKLYYNDSDLKHILKTNNFDNFNFEYFTNEKTDFHSDT
PRKNIKKILDKMWHFIENFNKTDENFMFIGNPGTGKTFLSNCIAKELLDRGNFVVYRTADELIQNLRSIKFNNDKHLEDI
IINCDLLIIDDLGTESINEFSKVELFNFINKKLLMRKKMMISSNYSIESILKNYSERISSRLLGNFTLFKFYCDDIRIQK
NIQNK
>Mature_325_residues
MIKGYKSEILKEYEKIREKESLALKNRRKEIKMKLPKVLELEQEIAKLSIEMSINILKNPDKSEEYINIIKNKITDLRVK
KSEFLVSNGYDMDFLEMHYNCNTCKDTGFVNNKRCSCYKQKLIKLYYNDSDLKHILKTNNFDNFNFEYFTNEKTDFHSDT
PRKNIKKILDKMWHFIENFNKTDENFMFIGNPGTGKTFLSNCIAKELLDRGNFVVYRTADELIQNLRSIKFNNDKHLEDI
IINCDLLIIDDLGTESINEFSKVELFNFINKKLLMRKKMMISSNYSIESILKNYSERISSRLLGNFTLFKFYCDDIRIQK
NIQNK

Specific function: This protein is required for chromosomal replication. It forms, in concert with dnaB protein and other prepriming proteins dnaT, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N' [H]

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dnaC family [H]

Homologues:

Organism=Escherichia coli, GI1790823, Length=154, Percent_Identity=29.2207792207792, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 38691; Mature: 38691

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKGYKSEILKEYEKIREKESLALKNRRKEIKMKLPKVLELEQEIAKLSIEMSINILKNP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEEEECCC
DKSEEYINIIKNKITDLRVKKSEFLVSNGYDMDFLEMHYNCNTCKDTGFVNNKRCSCYKQ
CCHHHHHHHHHHHHHHHEEEHHHEEEECCCCCCHHEEECCCCCCCCCCCCCCCHHHHHHH
KLIKLYYNDSDLKHILKTNNFDNFNFEYFTNEKTDFHSDTPRKNIKKILDKMWHFIENFN
HHHHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
KTDENFMFIGNPGTGKTFLSNCIAKELLDRGNFVVYRTADELIQNLRSIKFNNDKHLEDI
CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCCCCCCCCHHHH
IINCDLLIIDDLGTESINEFSKVELFNFINKKLLMRKKMMISSNYSIESILKNYSERISS
EEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RLLGNFTLFKFYCDDIRIQKNIQNK
HHHCCHHEEEEEHHHHHHHHCCCCC
>Mature Secondary Structure
MIKGYKSEILKEYEKIREKESLALKNRRKEIKMKLPKVLELEQEIAKLSIEMSINILKNP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEEEECCC
DKSEEYINIIKNKITDLRVKKSEFLVSNGYDMDFLEMHYNCNTCKDTGFVNNKRCSCYKQ
CCHHHHHHHHHHHHHHHEEEHHHEEEECCCCCCHHEEECCCCCCCCCCCCCCCHHHHHHH
KLIKLYYNDSDLKHILKTNNFDNFNFEYFTNEKTDFHSDTPRKNIKKILDKMWHFIENFN
HHHHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
KTDENFMFIGNPGTGKTFLSNCIAKELLDRGNFVVYRTADELIQNLRSIKFNNDKHLEDI
CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCCCCCCCCHHHH
IINCDLLIIDDLGTESINEFSKVELFNFINKKLLMRKKMMISSNYSIESILKNYSERISS
EEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RLLGNFTLFKFYCDDIRIQKNIQNK
HHHCCHHEEEEEHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]