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The map label for this gene is ykvT [H]

Identifier: 226950884

GI number: 226950884

Start: 3940580

End: 3941113

Strand: Direct

Name: ykvT [H]

Synonym: CLM_3899

Alternate gene names: 226950884

Gene position: 3940580-3941113 (Clockwise)

Preceding gene: 226950858

Following gene: 226950891

Centisome position: 94.83

GC content: 27.34

Gene sequence:

>534_bases
ATGAAAAAATATTTTTTATTGGATGTAATTATAGTTTTAACTATAATTATTTTTAGTTCATCTTGGAATAAATCCATAGC
TGCTTTTTCTTATATGCATAATTACAATATTGATAACTCTGAAGATGTTCAGGTTGTAAACTATACAAATAAAAAAATAT
ATCTTACAAAAGATGATATATACTTAATGGCTCAAATAGTTCAGGCTGAAAGTGAATCTGAGCCCTTTGAAGGTAAAATA
GCAGTAGCTTCTGTAATTTTGAATAGAACTGTAGCACCTGGATTTCCCAAAACTGTAGAAAATGTTATAAGACAAAAAAA
TGCCTTTTCTTGCTTAAATAAAAATGGATCAATATCTAAAATACCAGACCAAACAAGCTTTCAGGCAGTAGAAGAGGCTT
TAAAAGGAAAGGATCCTACAAATAACGCTCTTTATTTTTATAACCCTAAAATATCCACCTGCAATTGGATGAAAAACGTG
TCTAAAAATAATAAAAAAATAATAGGTAATCATGTATTTTTTAAAGCTAATTAA

Upstream 100 bases:

>100_bases
AAACACGGGGAAACCAAATTTTGGGGTGAATCGTAAAATTACGTAGGTTATACCTTTTCCGAACCCGTCAGCTAACCCCG
TAGGCAAAAGGAGTGAGAAA

Downstream 100 bases:

>100_bases
AAAATTAAATACTTTATATATTATAAAAAATCAAAAGGATTTAGCGCAAAATTCAAATTGTGTGCTAAATCCTATTTTAT
TTATTTGTAGAATATACTTA

Product: cell wall hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKKYFLLDVIIVLTIIIFSSSWNKSIAAFSYMHNYNIDNSEDVQVVNYTNKKIYLTKDDIYLMAQIVQAESESEPFEGKI
AVASVILNRTVAPGFPKTVENVIRQKNAFSCLNKNGSISKIPDQTSFQAVEEALKGKDPTNNALYFYNPKISTCNWMKNV
SKNNKKIIGNHVFFKAN

Sequences:

>Translated_177_residues
MKKYFLLDVIIVLTIIIFSSSWNKSIAAFSYMHNYNIDNSEDVQVVNYTNKKIYLTKDDIYLMAQIVQAESESEPFEGKI
AVASVILNRTVAPGFPKTVENVIRQKNAFSCLNKNGSISKIPDQTSFQAVEEALKGKDPTNNALYFYNPKISTCNWMKNV
SKNNKKIIGNHVFFKAN
>Mature_177_residues
MKKYFLLDVIIVLTIIIFSSSWNKSIAAFSYMHNYNIDNSEDVQVVNYTNKKIYLTKDDIYLMAQIVQAESESEPFEGKI
AVASVILNRTVAPGFPKTVENVIRQKNAFSCLNKNGSISKIPDQTSFQAVEEALKGKDPTNNALYFYNPKISTCNWMKNV
SKNNKKIIGNHVFFKAN

Specific function: Unknown

COG id: COG3773

COG function: function code M; Cell wall hydrolyses involved in spore germination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011105 [H]

Pfam domain/function: PF07486 Hydrolase_2 [H]

EC number: NA

Molecular weight: Translated: 20089; Mature: 20089

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYFLLDVIIVLTIIIFSSSWNKSIAAFSYMHNYNIDNSEDVQVVNYTNKKIYLTKDDI
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCH
YLMAQIVQAESESEPFEGKIAVASVILNRTVAPGFPKTVENVIRQKNAFSCLNKNGSISK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
IPDQTSFQAVEEALKGKDPTNNALYFYNPKISTCNWMKNVSKNNKKIIGNHVFFKAN
CCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MKKYFLLDVIIVLTIIIFSSSWNKSIAAFSYMHNYNIDNSEDVQVVNYTNKKIYLTKDDI
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCH
YLMAQIVQAESESEPFEGKIAVASVILNRTVAPGFPKTVENVIRQKNAFSCLNKNGSISK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
IPDQTSFQAVEEALKGKDPTNNALYFYNPKISTCNWMKNVSKNNKKIIGNHVFFKAN
CCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]