Click here to switch to the map view.

The map label for this gene is 226950858

Identifier: 226950858

GI number: 226950858

Start: 3915304

End: 3915786

Strand: Direct

Name: 226950858

Synonym: CLM_3871

Alternate gene names: NA

Gene position: 3915304-3915786 (Clockwise)

Preceding gene: 226950857

Following gene: 226950884

Centisome position: 94.22

GC content: 29.19

Gene sequence:

>483_bases
ATGGCAAATTTAACTCAAAAAGAACAATTACTTTTACAAGATCAAAAAAGTCATGAAGAATTATGTATTAAAAAATACAC
AAATTATGCAAATCAATCAAAGGATCCCCAACTAAAACAAATATTTTTGAACAATGCACAGGAGGAACAGGAGCATTTAA
ACAGCATAAATCAACTTTTAAGTGGTCAAATTCCAAATGTTAATTCACAGCAAAATAATCAGCAACAAAACAATCAACAA
CAACAAAACTCTCAAATGCAATCTGGTACAGGAACTGGATTAACAACTACAAATGATGCTGATTTATGCACTGACCTTTT
AGCTACAGAAAAATATGTATCTTCAACTTATGATACAGCTATATTTGAATTTAGAGATCCTAATATTAGAAATGTTTTAA
ACCACATTCAAAAGGAAGAACAACAACATGGAGAAACTATTTATAAATATATGGAAAGCAAAGGCATGTACAATCCTCAA
TAA

Upstream 100 bases:

>100_bases
TATTTTCCTCTTTATAATTTTCTTAATAACTTAAACTATTTTGGTAAAATAGGAATAATTTTGACCTTAAAAATAAATGA
TAAGTATAGGAGGTGTTCAT

Downstream 100 bases:

>100_bases
TTAAATTTATATACTTATATGAACGAAATCAGGCAAATAAAATTCTGTTAAAAATAATCATGTTTTTAACAGAATTTTAT
TTTAAACTTTATTTTTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MANLTQKEQLLLQDQKSHEELCIKKYTNYANQSKDPQLKQIFLNNAQEEQEHLNSINQLLSGQIPNVNSQQNNQQQNNQQ
QQNSQMQSGTGTGLTTTNDADLCTDLLATEKYVSSTYDTAIFEFRDPNIRNVLNHIQKEEQQHGETIYKYMESKGMYNPQ

Sequences:

>Translated_160_residues
MANLTQKEQLLLQDQKSHEELCIKKYTNYANQSKDPQLKQIFLNNAQEEQEHLNSINQLLSGQIPNVNSQQNNQQQNNQQ
QQNSQMQSGTGTGLTTTNDADLCTDLLATEKYVSSTYDTAIFEFRDPNIRNVLNHIQKEEQQHGETIYKYMESKGMYNPQ
>Mature_159_residues
ANLTQKEQLLLQDQKSHEELCIKKYTNYANQSKDPQLKQIFLNNAQEEQEHLNSINQLLSGQIPNVNSQQNNQQQNNQQQ
QNSQMQSGTGTGLTTTNDADLCTDLLATEKYVSSTYDTAIFEFRDPNIRNVLNHIQKEEQQHGETIYKYMESKGMYNPQ

Specific function: Unknown

COG id: COG5577

COG function: function code M; Spore coat protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18472; Mature: 18340

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLTQKEQLLLQDQKSHEELCIKKYTNYANQSKDPQLKQIFLNNAQEEQEHLNSINQLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
SGQIPNVNSQQNNQQQNNQQQQNSQMQSGTGTGLTTTNDADLCTDLLATEKYVSSTYDTA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IFEFRDPNIRNVLNHIQKEEQQHGETIYKYMESKGMYNPQ
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ANLTQKEQLLLQDQKSHEELCIKKYTNYANQSKDPQLKQIFLNNAQEEQEHLNSINQLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
SGQIPNVNSQQNNQQQNNQQQQNSQMQSGTGTGLTTTNDADLCTDLLATEKYVSSTYDTA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IFEFRDPNIRNVLNHIQKEEQQHGETIYKYMESKGMYNPQ
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA