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The map label for this gene is 226950725

Identifier: 226950725

GI number: 226950725

Start: 3752381

End: 3753025

Strand: Direct

Name: 226950725

Synonym: CLM_3735

Alternate gene names: NA

Gene position: 3752381-3753025 (Clockwise)

Preceding gene: 226950722

Following gene: 226950732

Centisome position: 90.3

GC content: 18.29

Gene sequence:

>645_bases
ATGATATTAAAAAATAAAGAATTTGTTATAGATATACTACTGTCAATTATTTTAACTATTATTTTTATAATTGTTTCCGT
AAAATTAACACTTAATTTTAAAATTTTATATTATTGGGATATTACAAATTTATCTATAATAAAAAATACAGATTTGAACA
CAAAAGAAATAAAAGAAAACTTTAATTATCTGATCTATTATTTGAATTCTCATAAAAATATTACATTCTGTCTCCCTAGT
TTACCTTCATCTGAAGAAGGGATAATCCATTTTAAAGATGTTAAAAATATATTTAATTTTTTAGATAAGTTTTTATTTAT
AAATATTTTTATTTCTATACCTATTATATATTATAAATTAAAAATAACCAAAAATGTTAGCTTTTTAAAGTATTCTTCCA
TTTCAACTATTATTATTCCTTTATTACTAATAATTCCATTAATCTTAAACTTCGACAAAGGTTTTACCTTTTTTCATAAA
ATTTTTTTCTCTAATGACTATTGGCTATTTGATCCTAACAAAGATCCTATTATAAACTTATTACCTGAAACTTTCTTTTT
TCATTCTGTTTTACTTATACTATTTCTTATAATATTTTTTTCTTTAATTTCTTACATATTGTATAAAAATATGAGAAAAT
TATAA

Upstream 100 bases:

>100_bases
ATGTTTTTTATACATTTGTATTATTATCATAAAAATATGTTTTTTATACTCCTTTTGGTATAAAATATACATATATATTT
TATAGTTAGGAGATTCTATT

Downstream 100 bases:

>100_bases
TTTCCTCATATTTTTCCCTATTTTTTTTATTATTTTTTCCCCATTTAATACTCCTATTATAAAAACTAAAGATGATACAA
CACCTACCATTATCAAAATA

Product: integral membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein; Membrane Spanning Protein

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MILKNKEFVIDILLSIILTIIFIIVSVKLTLNFKILYYWDITNLSIIKNTDLNTKEIKENFNYLIYYLNSHKNITFCLPS
LPSSEEGIIHFKDVKNIFNFLDKFLFINIFISIPIIYYKLKITKNVSFLKYSSISTIIIPLLLIIPLILNFDKGFTFFHK
IFFSNDYWLFDPNKDPIINLLPETFFFHSVLLILFLIIFFSLISYILYKNMRKL

Sequences:

>Translated_214_residues
MILKNKEFVIDILLSIILTIIFIIVSVKLTLNFKILYYWDITNLSIIKNTDLNTKEIKENFNYLIYYLNSHKNITFCLPS
LPSSEEGIIHFKDVKNIFNFLDKFLFINIFISIPIIYYKLKITKNVSFLKYSSISTIIIPLLLIIPLILNFDKGFTFFHK
IFFSNDYWLFDPNKDPIINLLPETFFFHSVLLILFLIIFFSLISYILYKNMRKL
>Mature_214_residues
MILKNKEFVIDILLSIILTIIFIIVSVKLTLNFKILYYWDITNLSIIKNTDLNTKEIKENFNYLIYYLNSHKNITFCLPS
LPSSEEGIIHFKDVKNIFNFLDKFLFINIFISIPIIYYKLKITKNVSFLKYSSISTIIIPLLLIIPLILNFDKGFTFFHK
IFFSNDYWLFDPNKDPIINLLPETFFFHSVLLILFLIIFFSLISYILYKNMRKL

Specific function: Unknown

COG id: COG4478

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25514; Mature: 25514

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKNKEFVIDILLSIILTIIFIIVSVKLTLNFKILYYWDITNLSIIKNTDLNTKEIKEN
CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCEEEEECCCCCHHHHHCC
FNYLIYYLNSHKNITFCLPSLPSSEEGIIHFKDVKNIFNFLDKFLFINIFISIPIIYYKL
CCEEEEEEECCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
KITKNVSFLKYSSISTIIIPLLLIIPLILNFDKGFTFFHKIFFSNDYWLFDPNKDPIINL
EEECCCCEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCCCCHHHH
LPETFFFHSVLLILFLIIFFSLISYILYKNMRKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MILKNKEFVIDILLSIILTIIFIIVSVKLTLNFKILYYWDITNLSIIKNTDLNTKEIKEN
CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCEEEEECCCCCHHHHHCC
FNYLIYYLNSHKNITFCLPSLPSSEEGIIHFKDVKNIFNFLDKFLFINIFISIPIIYYKL
CCEEEEEEECCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
KITKNVSFLKYSSISTIIIPLLLIIPLILNFDKGFTFFHKIFFSNDYWLFDPNKDPIINL
EEECCCCEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCCCCHHHH
LPETFFFHSVLLILFLIIFFSLISYILYKNMRKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA