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The map label for this gene is dapH [H]

Identifier: 226950585

GI number: 226950585

Start: 3600430

End: 3601140

Strand: Direct

Name: dapH [H]

Synonym: CLM_3568

Alternate gene names: 226950585

Gene position: 3600430-3601140 (Clockwise)

Preceding gene: 226950583

Following gene: 226950589

Centisome position: 86.65

GC content: 32.77

Gene sequence:

>711_bases
ATGAGTTACAATCTAACAGATCCGTATGAAATAGCTAGATACATAAAAGAAGCCAAAAAATCCACTCCTATCAAAGCTTA
CATAGAAGGAGATCTTTCAAACTGTGATTTTACGAACATAGAAAAATTTAATAGTGGAGATTTATATATATTATTTGGTG
AATCAGAAGAAATATTAGTTATTATAGAAAAAAATAAAGATAAAATAAAAAATTGTAGAATAGAACAGGATAGAAGAAAA
TCTGCAATTCCTTTACTTGATATGCTTAAAATAAATGCTAGAATAGAGCCAGGTGCTACAATAAGAGATAAAGTTATAAT
AGGAGAAAATGCTGTTATTATGATGGGCGCCGTTGTAAATATAGGTGCTGAAATCGGAGAAGGAACTATGGTGGATATGA
ACGCTGTAGTTGGCGCTAGAGGAAAACTTGGTAAAAATGTACATTTAGGTGCTGGTGCTGTAGTTGCTGGTGTTTTAGAA
CCACCTAGCAGTGATCCTTGTACTATTGAGGATAACGTTCTTATCGGCGCAAATGCTGTTATATTAGAAGGTATAAAAAT
TGGTAAAGGTTCTGTAGTGGCAGCAGGGTCTATAGTTACTACTGATGTACCAGAAAACGTAGTAGTGGCTGGTGCTCCAG
CTAAAATAATAAAAGAAGTAGATGTAAAAACTAAAGATAAAACTAAGCTTTTAGATGATTTAAGAAAATAA

Upstream 100 bases:

>100_bases
TACTTATTATACTATTATTTTCATGTATATTAAATACCCCCTTTATTTAAACATCAATATTTATTATAATAGTGTTATTA
TAAAATAAGGAGGAAATATA

Downstream 100 bases:

>100_bases
ATTTATAAAAGATAGTTTTAAAACTACCTTTCATATTTGATAAAGTTTTCTATTAATTTATTTAAATATACTTGAGAATA
GTATGTACAACTTAAAAAGT

Product: putative 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase

Products: NA

Alternate protein names: Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSYNLTDPYEIARYIKEAKKSTPIKAYIEGDLSNCDFTNIEKFNSGDLYILFGESEEILVIIEKNKDKIKNCRIEQDRRK
SAIPLLDMLKINARIEPGATIRDKVIIGENAVIMMGAVVNIGAEIGEGTMVDMNAVVGARGKLGKNVHLGAGAVVAGVLE
PPSSDPCTIEDNVLIGANAVILEGIKIGKGSVVAAGSIVTTDVPENVVVAGAPAKIIKEVDVKTKDKTKLLDDLRK

Sequences:

>Translated_236_residues
MSYNLTDPYEIARYIKEAKKSTPIKAYIEGDLSNCDFTNIEKFNSGDLYILFGESEEILVIIEKNKDKIKNCRIEQDRRK
SAIPLLDMLKINARIEPGATIRDKVIIGENAVIMMGAVVNIGAEIGEGTMVDMNAVVGARGKLGKNVHLGAGAVVAGVLE
PPSSDPCTIEDNVLIGANAVILEGIKIGKGSVVAAGSIVTTDVPENVVVAGAPAKIIKEVDVKTKDKTKLLDDLRK
>Mature_235_residues
SYNLTDPYEIARYIKEAKKSTPIKAYIEGDLSNCDFTNIEKFNSGDLYILFGESEEILVIIEKNKDKIKNCRIEQDRRKS
AIPLLDMLKINARIEPGATIRDKVIIGENAVIMMGAVVNIGAEIGEGTMVDMNAVVGARGKLGKNVHLGAGAVVAGVLEP
PSSDPCTIEDNVLIGANAVILEGIKIGKGSVVAAGSIVTTDVPENVVVAGAPAKIIKEVDVKTKDKTKLLDDLRK

Specific function: Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate [H]

COG id: COG2171

COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family. DapH subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786362, Length=169, Percent_Identity=39.0532544378698, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1786537, Length=72, Percent_Identity=47.2222222222222, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1786664, Length=55, Percent_Identity=58.1818181818182, Blast_Score=63, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322243, Length=118, Percent_Identity=36.4406779661017, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013710
- InterPro:   IPR018357
- InterPro:   IPR019873
- InterPro:   IPR011004 [H]

Pfam domain/function: PF08503 DapD_N [H]

EC number: =2.3.1.89 [H]

Molecular weight: Translated: 25304; Mature: 25173

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYNLTDPYEIARYIKEAKKSTPIKAYIEGDLSNCDFTNIEKFNSGDLYILFGESEEILV
CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEECCCCCEEEEECCCCCEEE
IIEKNKDKIKNCRIEQDRRKSAIPLLDMLKINARIEPGATIRDKVIIGENAVIMMGAVVN
EEECCCCHHHCCCCCCHHHHCCCCEEEEEEECCEECCCCCEEEEEEECCCCEEEEEEHEE
IGAEIGEGTMVDMNAVVGARGKLGKNVHLGAGAVVAGVLEPPSSDPCTIEDNVLIGANAV
CCCCCCCCEEEEEHHEECCCCCCCCEEEECCCEEEEEEECCCCCCCCEEECCEEECCCEE
ILEGIKIGKGSVVAAGSIVTTDVPENVVVAGAPAKIIKEVDVKTKDKTKLLDDLRK
EEEEEEECCCCEEEECCEEEECCCCCEEEECCCHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SYNLTDPYEIARYIKEAKKSTPIKAYIEGDLSNCDFTNIEKFNSGDLYILFGESEEILV
CCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEECCCCCEEEEECCCCCEEE
IIEKNKDKIKNCRIEQDRRKSAIPLLDMLKINARIEPGATIRDKVIIGENAVIMMGAVVN
EEECCCCHHHCCCCCCHHHHCCCCEEEEEEECCEECCCCCEEEEEEECCCCEEEEEEHEE
IGAEIGEGTMVDMNAVVGARGKLGKNVHLGAGAVVAGVLEPPSSDPCTIEDNVLIGANAV
CCCCCCCCEEEEEHHEECCCCCCCCEEEECCCEEEEEEECCCCCCCCEEECCEEECCCEE
ILEGIKIGKGSVVAAGSIVTTDVPENVVVAGAPAKIIKEVDVKTKDKTKLLDDLRK
EEEEEEECCCCEEEECCEEEECCCCCEEEECCCHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA