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The map label for this gene is wcaL [C]

Identifier: 226950527

GI number: 226950527

Start: 3523941

End: 3525068

Strand: Reverse

Name: wcaL [C]

Synonym: CLM_3503

Alternate gene names: 226950527

Gene position: 3525068-3523941 (Counterclockwise)

Preceding gene: 226950528

Following gene: 226950526

Centisome position: 84.83

GC content: 24.56

Gene sequence:

>1128_bases
GTGAATATACTAATACTTGCAAATTGGTATCCTAATAAGAATAATCCTATCAATGGAATTTTTATTAAGGATCAAGTAAA
GGCTTTAATGGAAGCTGGTTTAAAACCAATAGTGTTTTTTCCTTATGATAATTCCATAAAAAGAGGAAAATTATTATTTA
ATATAGAAGAGGGCATATCTACTTATAGATGTAATACAGATTATTTACAAAGTTTCAAAAAATCTAAAATAAATAGTTTA
TTATTGTCTTATAAATGGCTTAAATATATAGTGAAAAAAGAAAAAATAAATCTAATACATGCGCATGTTTGCTATACTGC
AGGAATATTATGTTCGATTTTTAAAAGATTTAATAATATACCATATATAATTACTGAACATAGATCCGATATTGTAAATT
TCTCTAAGAAGTCCTACAATAGATTTATATCTAAATATGCATATAAAAGAGCAGAGAAAGTTATAACAGTAAGTAAATTT
TTAGCTAATGAGTTGAAGAATTTAGGATATAAGTTTAATGAAGAAATAATAGGAAATGAAGTTGATATTAAGGAGTATAG
TTTATCTAATACAAGAAATAATTCAGATGTAGTAAAAATTTTATTTATAGGTAGTATGGCTGAAAATGAAATAAAAGGAT
TGCAGTATTTCATTCCTGCCTTAGCTAAGTATATGAAAAAAAATAATAATATTGAAATGACATTTATAGGAAATGGAATA
AACAGAGTAAAATATGAAAAAATGTGTGAAGATTTAAATATAAAAAATAAATGTAAGTTTCTAGGAACTATAGATAAACA
GGACATACCTATATATATAAAAAGGAATGATTTTTTAGTATTACCAAGTATTAAAGAAACTTTTGGATGTGTTCTTATTG
AGGCTATGGCTTGTGGTAAACCAGTTTTGGCAACTAAGTCTGGGGGGCCTAATGAATTTGTAAATAATAATGTAGGAATA
TTGGTAGAACCTAAAAATGAAAAAGCTTTAGAAGAGGGAATAGACCTAATTATAAAAAGATATGATACCTTTGATCCAGA
ATATATTAGAAAATATGTAGTTGATAATTATAGTTATAATATAATAGGCCAAAAGATAAGAAAAGTTTATGATGACATAT
TAAATTAA

Upstream 100 bases:

>100_bases
AGTTATAAAAACTCCTTTTTTAATGTAATAGGTGAGTCGGTACAAGCAAAAGATTATTTCGTTATTAATTAAGATTTTAT
GGCTGAAAAGAGGTGAAATT

Downstream 100 bases:

>100_bases
AATATATAAGGACTTTATACATATAAATTATTAATAAATATAAAAAGGAGTTGTTTAAAACTCCTTTTTTAAATATCATT
ATATTTGTAAAATATGAAAT

Product: group 1 glycosyl transferase family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MNILILANWYPNKNNPINGIFIKDQVKALMEAGLKPIVFFPYDNSIKRGKLLFNIEEGISTYRCNTDYLQSFKKSKINSL
LLSYKWLKYIVKKEKINLIHAHVCYTAGILCSIFKRFNNIPYIITEHRSDIVNFSKKSYNRFISKYAYKRAEKVITVSKF
LANELKNLGYKFNEEIIGNEVDIKEYSLSNTRNNSDVVKILFIGSMAENEIKGLQYFIPALAKYMKKNNNIEMTFIGNGI
NRVKYEKMCEDLNIKNKCKFLGTIDKQDIPIYIKRNDFLVLPSIKETFGCVLIEAMACGKPVLATKSGGPNEFVNNNVGI
LVEPKNEKALEEGIDLIIKRYDTFDPEYIRKYVVDNYSYNIIGQKIRKVYDDILN

Sequences:

>Translated_375_residues
MNILILANWYPNKNNPINGIFIKDQVKALMEAGLKPIVFFPYDNSIKRGKLLFNIEEGISTYRCNTDYLQSFKKSKINSL
LLSYKWLKYIVKKEKINLIHAHVCYTAGILCSIFKRFNNIPYIITEHRSDIVNFSKKSYNRFISKYAYKRAEKVITVSKF
LANELKNLGYKFNEEIIGNEVDIKEYSLSNTRNNSDVVKILFIGSMAENEIKGLQYFIPALAKYMKKNNNIEMTFIGNGI
NRVKYEKMCEDLNIKNKCKFLGTIDKQDIPIYIKRNDFLVLPSIKETFGCVLIEAMACGKPVLATKSGGPNEFVNNNVGI
LVEPKNEKALEEGIDLIIKRYDTFDPEYIRKYVVDNYSYNIIGQKIRKVYDDILN
>Mature_375_residues
MNILILANWYPNKNNPINGIFIKDQVKALMEAGLKPIVFFPYDNSIKRGKLLFNIEEGISTYRCNTDYLQSFKKSKINSL
LLSYKWLKYIVKKEKINLIHAHVCYTAGILCSIFKRFNNIPYIITEHRSDIVNFSKKSYNRFISKYAYKRAEKVITVSKF
LANELKNLGYKFNEEIIGNEVDIKEYSLSNTRNNSDVVKILFIGSMAENEIKGLQYFIPALAKYMKKNNNIEMTFIGNGI
NRVKYEKMCEDLNIKNKCKFLGTIDKQDIPIYIKRNDFLVLPSIKETFGCVLIEAMACGKPVLATKSGGPNEFVNNNVGI
LVEPKNEKALEEGIDLIIKRYDTFDPEYIRKYVVDNYSYNIIGQKIRKVYDDILN

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI11863130, Length=382, Percent_Identity=24.0837696335079, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI299782546, Length=167, Percent_Identity=25.748502994012, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17532709, Length=317, Percent_Identity=18.6119873817035, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 43443; Mature: 43443

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILILANWYPNKNNPINGIFIKDQVKALMEAGLKPIVFFPYDNSIKRGKLLFNIEEGIS
CEEEEEEECCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEHHCCC
TYRCNTDYLQSFKKSKINSLLLSYKWLKYIVKKEKINLIHAHVCYTAGILCSIFKRFNNI
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCC
PYIITEHRSDIVNFSKKSYNRFISKYAYKRAEKVITVSKFLANELKNLGYKFNEEIIGNE
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
VDIKEYSLSNTRNNSDVVKILFIGSMAENEIKGLQYFIPALAKYMKKNNNIEMTFIGNGI
CCCHHEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
NRVKYEKMCEDLNIKNKCKFLGTIDKQDIPIYIKRNDFLVLPSIKETFGCVLIEAMACGK
CHHHHHHHHHHCCCCCHHHEEECCCCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHCCC
PVLATKSGGPNEFVNNNVGILVEPKNEKALEEGIDLIIKRYDTFDPEYIRKYVVDNYSYN
CEEEECCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
IIGQKIRKVYDDILN
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MNILILANWYPNKNNPINGIFIKDQVKALMEAGLKPIVFFPYDNSIKRGKLLFNIEEGIS
CEEEEEEECCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEHHCCC
TYRCNTDYLQSFKKSKINSLLLSYKWLKYIVKKEKINLIHAHVCYTAGILCSIFKRFNNI
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCC
PYIITEHRSDIVNFSKKSYNRFISKYAYKRAEKVITVSKFLANELKNLGYKFNEEIIGNE
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
VDIKEYSLSNTRNNSDVVKILFIGSMAENEIKGLQYFIPALAKYMKKNNNIEMTFIGNGI
CCCHHEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
NRVKYEKMCEDLNIKNKCKFLGTIDKQDIPIYIKRNDFLVLPSIKETFGCVLIEAMACGK
CHHHHHHHHHHCCCCCHHHEEECCCCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHCCC
PVLATKSGGPNEFVNNNVGILVEPKNEKALEEGIDLIIKRYDTFDPEYIRKYVVDNYSYN
CEEEECCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
IIGQKIRKVYDDILN
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]