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The map label for this gene is yajC [C]

Identifier: 226950496

GI number: 226950496

Start: 3493452

End: 3493787

Strand: Reverse

Name: yajC [C]

Synonym: CLM_3472

Alternate gene names: 226950496

Gene position: 3493787-3493452 (Counterclockwise)

Preceding gene: 226950497

Following gene: 226950495

Centisome position: 84.08

GC content: 26.79

Gene sequence:

>336_bases
ATGCAACAAGGTCTAGGATTAAATAGTATATTCTTAGTAGTAATGCTTGGATTATTCTATGTAATGGTATTTTTGCCAGA
GAAGAAAAGAAAGAAAAAGTATAATGAAATGTTAAATTCTATCTCTGTAAACGATGAAGTAATAACAAGAGGTGGAATAA
TAGGAAAAATAGTTAATATAAAAGAAGACTATGTAATTATACAAACAGGCCCAGATAGAGTTAAGGTACAAATTAGTAAA
AGTGGAATATTAGACATAAGTAAAAAAAGAGAAGATACAGATAAAAAAGAAGATATGGATAAGAAAGAAGAAAAATCAGC
AAAAGAGGATAAATAA

Upstream 100 bases:

>100_bases
TTAATTGTAAATTATCAATTAATAATAAAAAAACTTTTCAAAATTAAAGTGAAAAGTAGTAAAATAAATTATAGTTCATA
AAAAATTAGGAGGGATATAT

Downstream 100 bases:

>100_bases
ATTATCATAAAACACCCCCTTAATACATAAATACTAAATATGAGGGGGTGTTTTATGTTGAATAAAAAAAATACTGAGTT
TATTGTACAAGGATTATTAA

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MQQGLGLNSIFLVVMLGLFYVMVFLPEKKRKKKYNEMLNSISVNDEVITRGGIIGKIVNIKEDYVIIQTGPDRVKVQISK
SGILDISKKREDTDKKEDMDKKEEKSAKEDK

Sequences:

>Translated_111_residues
MQQGLGLNSIFLVVMLGLFYVMVFLPEKKRKKKYNEMLNSISVNDEVITRGGIIGKIVNIKEDYVIIQTGPDRVKVQISK
SGILDISKKREDTDKKEDMDKKEEKSAKEDK
>Mature_111_residues
MQQGLGLNSIFLVVMLGLFYVMVFLPEKKRKKKYNEMLNSISVNDEVITRGGIIGKIVNIKEDYVIIQTGPDRVKVQISK
SGILDISKKREDTDKKEDMDKKEEKSAKEDK

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12707; Mature: 12707

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQGLGLNSIFLVVMLGLFYVMVFLPEKKRKKKYNEMLNSISVNDEVITRGGIIGKIVNI
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEC
KEDYVIIQTGPDRVKVQISKSGILDISKKREDTDKKEDMDKKEEKSAKEDK
CCCEEEEEECCCEEEEEECCCCCEECCCCCCCCCHHHCCCHHHHHCCCCCC
>Mature Secondary Structure
MQQGLGLNSIFLVVMLGLFYVMVFLPEKKRKKKYNEMLNSISVNDEVITRGGIIGKIVNI
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEC
KEDYVIIQTGPDRVKVQISKSGILDISKKREDTDKKEDMDKKEEKSAKEDK
CCCEEEEEECCCEEEEEECCCCCEECCCCCCCCCHHHCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]