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The map label for this gene is yqgX [H]

Identifier: 226950486

GI number: 226950486

Start: 3483869

End: 3484468

Strand: Reverse

Name: yqgX [H]

Synonym: CLM_3462

Alternate gene names: 226950486

Gene position: 3484468-3483869 (Counterclockwise)

Preceding gene: 226950487

Following gene: 226950485

Centisome position: 83.86

GC content: 28.5

Gene sequence:

>600_bases
ATGGATATAAAGACAATACCTGTTGGTATATACAATGCGAACTGTTATTTGTTAATAGACCAAGATAAATGTGCAATTAT
AGATCCAGGTGGAGACCCAGAAGATATAATAAAGATTATAGAAGATAATAATTTAATTCCACAATTTATTTTGCTAACTC
ATGGACATATAGATCATGTAGGTGGAGTAGAAGCTATAAAGGATAAATACAATATACCTTTTTATATAAATAGAAAAGAT
GAGGATTTAATCAAAGAAGCAGAATATATATTTGGAAATTTTGGTAAATACAAAAATGCAGATGAATATTTGGTAGAAGG
TAAAGAGTTTCAATTAGGAAATTTAAAAATAAAAGCTATAGAAACTCCAGGACATAGTCCAGGTGGAATGAGTTTTTTAG
TGAATAACGTTATATTTACAGGAGATACATTGTTTAGGGAATCTATTGGAAGAAGTGATTTTATAGGAGGAAGCCATAAT
ACTTTAATAAATAGTATTCAAAGTAAGATAACTGTATTAGACCCAGATATATATGTGTTACCAGGTCATGGTCCACAATC
TACAATAGGCTATGAAAAAGATAATAATCCATTTTTTTAA

Upstream 100 bases:

>100_bases
GCCAGTTACAATACTTTTAGATAGTAAAAAGACATTTTAAAAGTTTAGTTATATACTAAAAGAGAGTAGAAAATTTTAAT
TTTTAAAAGAGGTGTATTTA

Downstream 100 bases:

>100_bases
ATAGATATATCCCTTGAAAAGCATTGGAGTGCATAATATGAAGCTGAAAATAAATTTAAATGATATGCAGTATAGATACG
ATGTATATCAAATATTAAAT

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MDIKTIPVGIYNANCYLLIDQDKCAIIDPGGDPEDIIKIIEDNNLIPQFILLTHGHIDHVGGVEAIKDKYNIPFYINRKD
EDLIKEAEYIFGNFGKYKNADEYLVEGKEFQLGNLKIKAIETPGHSPGGMSFLVNNVIFTGDTLFRESIGRSDFIGGSHN
TLINSIQSKITVLDPDIYVLPGHGPQSTIGYEKDNNPFF

Sequences:

>Translated_199_residues
MDIKTIPVGIYNANCYLLIDQDKCAIIDPGGDPEDIIKIIEDNNLIPQFILLTHGHIDHVGGVEAIKDKYNIPFYINRKD
EDLIKEAEYIFGNFGKYKNADEYLVEGKEFQLGNLKIKAIETPGHSPGGMSFLVNNVIFTGDTLFRESIGRSDFIGGSHN
TLINSIQSKITVLDPDIYVLPGHGPQSTIGYEKDNNPFF
>Mature_199_residues
MDIKTIPVGIYNANCYLLIDQDKCAIIDPGGDPEDIIKIIEDNNLIPQFILLTHGHIDHVGGVEAIKDKYNIPFYINRKD
EDLIKEAEYIFGNFGKYKNADEYLVEGKEFQLGNLKIKAIETPGHSPGGMSFLVNNVIFTGDTLFRESIGRSDFIGGSHN
TLINSIQSKITVLDPDIYVLPGHGPQSTIGYEKDNNPFF

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Homo sapiens, GI41327741, Length=192, Percent_Identity=27.6041666666667, Blast_Score=72, Evalue=3e-13,
Organism=Escherichia coli, GI1787158, Length=208, Percent_Identity=37.0192307692308, Blast_Score=147, Evalue=5e-37,
Organism=Escherichia coli, GI1786406, Length=184, Percent_Identity=31.5217391304348, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17538952, Length=183, Percent_Identity=32.2404371584699, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24667703, Length=192, Percent_Identity=26.5625, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21356335, Length=192, Percent_Identity=26.5625, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24667711, Length=192, Percent_Identity=26.5625, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221330176, Length=191, Percent_Identity=28.7958115183246, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 22205; Mature: 22205

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKTIPVGIYNANCYLLIDQDKCAIIDPGGDPEDIIKIIEDNNLIPQFILLTHGHIDHV
CCCEEEEEEEECCEEEEEEECCCEEEECCCCCHHHHHEECCCCCCCCEEEEEECCCCCCC
GGVEAIKDKYNIPFYINRKDEDLIKEAEYIFGNFGKYKNADEYLVEGKEFQLGNLKIKAI
CCHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCHHEECCCEEEECCEEEEEE
ETPGHSPGGMSFLVNNVIFTGDTLFRESIGRSDFIGGSHNTLINSIQSKITVLDPDIYVL
ECCCCCCCCHHEEEECEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEECCCEEEE
PGHGPQSTIGYEKDNNPFF
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDIKTIPVGIYNANCYLLIDQDKCAIIDPGGDPEDIIKIIEDNNLIPQFILLTHGHIDHV
CCCEEEEEEEECCEEEEEEECCCEEEECCCCCHHHHHEECCCCCCCCEEEEEECCCCCCC
GGVEAIKDKYNIPFYINRKDEDLIKEAEYIFGNFGKYKNADEYLVEGKEFQLGNLKIKAI
CCHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCHHEECCCEEEECCEEEEEE
ETPGHSPGGMSFLVNNVIFTGDTLFRESIGRSDFIGGSHNTLINSIQSKITVLDPDIYVL
ECCCCCCCCHHEEEECEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEECCCEEEE
PGHGPQSTIGYEKDNNPFF
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]