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The map label for this gene is 226950443

Identifier: 226950443

GI number: 226950443

Start: 3446778

End: 3448121

Strand: Reverse

Name: 226950443

Synonym: CLM_3417

Alternate gene names: NA

Gene position: 3448121-3446778 (Counterclockwise)

Preceding gene: 226950444

Following gene: 226950442

Centisome position: 82.98

GC content: 24.4

Gene sequence:

>1344_bases
GTGGCTACAATAGGAGAACAATTATTGCAACCTGAAAGTGGATGGATAAGGTATGATGATACTGATAAAAACATCAGCTA
CATCGGAAATGAATGGAAAACAGATTATGATTCTCATTATTCAAATACAGTAGGAGATAAAATATGTTTTAATTTTGTTG
GAAGTAAAATAAGAATATTAGTATTTACGAATAATAGTCATTCAAAAGATGTTAAAATAAAAATAAATAATATTGTTTAT
AGTTATGTGGAGTATATATATCCAATCACGCCTGCTTCATTAGTATTAGTTTTTGAAAAAGAAATGCCTAGTTTTAAAGA
ATATAGTGCTGAAATATATATTGAAAGAAAAACGGATAATCAGTATGGATGGTTTGGTTTAGATTCAATAGACATAGACG
AAAATGGAAAGTTGAAGCCTTATAATCCTAATTTATCATCAATAATAACATGGAGTCCTAATGATAAAACAACTAATTAT
ACCTTAAGTAATAATAATTTAACAGCTTCTCTTTCAAAAACTCCTCCCTATGAATATCATGGAATAAAAGCAACAAAGTT
TATTACTAATGGTAAGTTTTATGCAGAATTTTTAGTAAATGATATGCCAAATGTATGTACATTAGGTTTGGCTACTTATG
AAGCTAGTTTATCAGGATATACGTCTATATCTCAATTCCCAAGTAATATTAAAACTAGTGTAATTAATGCTACAGAAAAT
ACATTTATAGGAATGGCTTTTGATTTAGATAATCATGTTATAAATTTTTATATTAATGGAGTATTGGATATTAATTCTAC
AATTATTTTAGAAAAGAAGGTATATACTGTCATTATGATAAATAATAATGGAGAAAATAAAGGTGGAACTATAACAGCAA
ATTTCGGAGCAACTCCATTTAATATTGTTAATTCTAATAAAAGTACATGGAATAAATTAGTAGATGTAGGATATAAACCA
TATGATATTTATAATGCTAATTGGGAGTGGAGGGTTTCAAAATATTTTCTAAAACAAAACAATAACTATTACTCAATAAA
TAATAATTATATAGATTTAGGAAAGATAAATAATGATGAAGAATTAAATAATTTAATAGATGAATATGGTTATAATGATT
TATCTATACTTACTAAAGAATTAAATACTAAAAAAGTACCTACAAAATTAGAGAATGATTATTATAAGTCTTTTGATATT
AACTTAAATGATATAAAAGATAGTATAAGCCTTATAGAAGAAAATGATAAAAAATATATTGAATATGGGTGTGGTAATTA
CAAAATATCAGATGAAATTAAAAAATTTAATAATGGTAAATTTGAAGTGTTAATGAAAGAATAA

Upstream 100 bases:

>100_bases
ATGATTTATAATTGTGAACCCTTTAGACCAATAGATAACTTAAAGAAAAATGGCTATATTTGTAATATATTATTTAGGGA
AGTGTAGGAGGTGATATAAA

Downstream 100 bases:

>100_bases
AATATTCATTTTAAATAAAATAATTTTAAAGTTTAGATTGGAAGTGATTATATGAAAAAATGGTCAAATGATTTAACAGA
TAGTTTAAAACAAGAAAATT

Product: cell adhesion domain-containing protein

Products: NA

Alternate protein names: Contains Cell Adhesion Domain Protein; Phage-Like Protein; F5/8 Type C Domain Protein; Ig Group 2 Domain Protein; Cell Adhesion Domain Protein; Ig Domain-Containing Protein

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MATIGEQLLQPESGWIRYDDTDKNISYIGNEWKTDYDSHYSNTVGDKICFNFVGSKIRILVFTNNSHSKDVKIKINNIVY
SYVEYIYPITPASLVLVFEKEMPSFKEYSAEIYIERKTDNQYGWFGLDSIDIDENGKLKPYNPNLSSIITWSPNDKTTNY
TLSNNNLTASLSKTPPYEYHGIKATKFITNGKFYAEFLVNDMPNVCTLGLATYEASLSGYTSISQFPSNIKTSVINATEN
TFIGMAFDLDNHVINFYINGVLDINSTIILEKKVYTVIMINNNGENKGGTITANFGATPFNIVNSNKSTWNKLVDVGYKP
YDIYNANWEWRVSKYFLKQNNNYYSINNNYIDLGKINNDEELNNLIDEYGYNDLSILTKELNTKKVPTKLENDYYKSFDI
NLNDIKDSISLIEENDKKYIEYGCGNYKISDEIKKFNNGKFEVLMKE

Sequences:

>Translated_447_residues
MATIGEQLLQPESGWIRYDDTDKNISYIGNEWKTDYDSHYSNTVGDKICFNFVGSKIRILVFTNNSHSKDVKIKINNIVY
SYVEYIYPITPASLVLVFEKEMPSFKEYSAEIYIERKTDNQYGWFGLDSIDIDENGKLKPYNPNLSSIITWSPNDKTTNY
TLSNNNLTASLSKTPPYEYHGIKATKFITNGKFYAEFLVNDMPNVCTLGLATYEASLSGYTSISQFPSNIKTSVINATEN
TFIGMAFDLDNHVINFYINGVLDINSTIILEKKVYTVIMINNNGENKGGTITANFGATPFNIVNSNKSTWNKLVDVGYKP
YDIYNANWEWRVSKYFLKQNNNYYSINNNYIDLGKINNDEELNNLIDEYGYNDLSILTKELNTKKVPTKLENDYYKSFDI
NLNDIKDSISLIEENDKKYIEYGCGNYKISDEIKKFNNGKFEVLMKE
>Mature_446_residues
ATIGEQLLQPESGWIRYDDTDKNISYIGNEWKTDYDSHYSNTVGDKICFNFVGSKIRILVFTNNSHSKDVKIKINNIVYS
YVEYIYPITPASLVLVFEKEMPSFKEYSAEIYIERKTDNQYGWFGLDSIDIDENGKLKPYNPNLSSIITWSPNDKTTNYT
LSNNNLTASLSKTPPYEYHGIKATKFITNGKFYAEFLVNDMPNVCTLGLATYEASLSGYTSISQFPSNIKTSVINATENT
FIGMAFDLDNHVINFYINGVLDINSTIILEKKVYTVIMINNNGENKGGTITANFGATPFNIVNSNKSTWNKLVDVGYKPY
DIYNANWEWRVSKYFLKQNNNYYSINNNYIDLGKINNDEELNNLIDEYGYNDLSILTKELNTKKVPTKLENDYYKSFDIN
LNDIKDSISLIEENDKKYIEYGCGNYKISDEIKKFNNGKFEVLMKE

Specific function: Unknown

COG id: COG5492

COG function: function code N; Bacterial surface proteins containing Ig-like domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51374; Mature: 51243

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIGEQLLQPESGWIRYDDTDKNISYIGNEWKTDYDSHYSNTVGDKICFNFVGSKIRIL
CCCCCHHHCCCCCCEEEECCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEE
VFTNNSHSKDVKIKINNIVYSYVEYIYPITPASLVLVFEKEMPSFKEYSAEIYIERKTDN
EEECCCCCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCC
QYGWFGLDSIDIDENGKLKPYNPNLSSIITWSPNDKTTNYTLSNNNLTASLSKTPPYEYH
CCCEEECCEEEECCCCCEECCCCCCCEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCC
GIKATKFITNGKFYAEFLVNDMPNVCTLGLATYEASLSGYTSISQFPSNIKTSVINATEN
CEEEEEEEECCCEEEEEHHCCCCCCEEEEEEEEECCCCCCCHHHHCCCCCEEEEEECCCC
TFIGMAFDLDNHVINFYINGVLDINSTIILEKKVYTVIMINNNGENKGGTITANFGATPF
EEEEEEEECCCEEEEEEEEEEEECCCEEEEEEEEEEEEEEECCCCCCCCEEEEECCCCCE
NIVNSNKSTWNKLVDVGYKPYDIYNANWEWRVSKYFLKQNNNYYSINNNYIDLGKINNDE
EEECCCCHHHHHHHHCCCCCEEEECCCEEEEEEEEEEECCCCEEEECCCEEEECCCCCHH
ELNNLIDEYGYNDLSILTKELNTKKVPTKLENDYYKSFDINLNDIKDSISLIEENDKKYI
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEE
EYGCGNYKISDEIKKFNNGKFEVLMKE
EECCCCEEEHHHHHHCCCCEEEEEEEC
>Mature Secondary Structure 
ATIGEQLLQPESGWIRYDDTDKNISYIGNEWKTDYDSHYSNTVGDKICFNFVGSKIRIL
CCCCHHHCCCCCCEEEECCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEE
VFTNNSHSKDVKIKINNIVYSYVEYIYPITPASLVLVFEKEMPSFKEYSAEIYIERKTDN
EEECCCCCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCC
QYGWFGLDSIDIDENGKLKPYNPNLSSIITWSPNDKTTNYTLSNNNLTASLSKTPPYEYH
CCCEEECCEEEECCCCCEECCCCCCCEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCC
GIKATKFITNGKFYAEFLVNDMPNVCTLGLATYEASLSGYTSISQFPSNIKTSVINATEN
CEEEEEEEECCCEEEEEHHCCCCCCEEEEEEEEECCCCCCCHHHHCCCCCEEEEEECCCC
TFIGMAFDLDNHVINFYINGVLDINSTIILEKKVYTVIMINNNGENKGGTITANFGATPF
EEEEEEEECCCEEEEEEEEEEEECCCEEEEEEEEEEEEEEECCCCCCCCEEEEECCCCCE
NIVNSNKSTWNKLVDVGYKPYDIYNANWEWRVSKYFLKQNNNYYSINNNYIDLGKINNDE
EEECCCCHHHHHHHHCCCCCEEEECCCEEEEEEEEEEECCCCEEEECCCEEEECCCCCHH
ELNNLIDEYGYNDLSILTKELNTKKVPTKLENDYYKSFDINLNDIKDSISLIEENDKKYI
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEE
EYGCGNYKISDEIKKFNNGKFEVLMKE
EECCCCEEEHHHHHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA