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The map label for this gene is 226950442

Identifier: 226950442

GI number: 226950442

Start: 3445917

End: 3446726

Strand: Reverse

Name: 226950442

Synonym: CLM_3416

Alternate gene names: NA

Gene position: 3446726-3445917 (Counterclockwise)

Preceding gene: 226950443

Following gene: 226950441

Centisome position: 82.95

GC content: 22.84

Gene sequence:

>810_bases
ATGAAAAAATGGTCAAATGATTTAACAGATAGTTTAAAACAAGAAAATTTTACATCATCAAGATTTCATACTGGACGCTA
TCATTATATACCATATCTTGCTTTTGATAATCATACTGCATCTACTGTTTATGATGGATTTCAACTCCATTATCCTAATA
ATATGGATTGGTTAAAAATAGATCTTATTAATCCAGTAAACCCTTCTAAAATAACTATTCAAGGGAATGATGACCAACCA
TATTTACCTAAAAAGATAAGAGTATTAATGAGCGACAATGATATAGACTATATTGAGATAGATATTATAGATAATATAAA
GAATGATAATAAAGTAACTGAATATGTTTATAAAAATTCTACTAAAAAATATAGATTTTTAAAAATAGAATTTTTAGAAT
TTTATTCGACAGAGTGGTTATCAATTAATCAAATGCAATTTTTTGAGGCAATAAATGTTAATAAGTATCTAATTAATCAA
AATGAAAATTATTATTCTACTAATTCTAATTTCCTTAATCTTGGACAACCTATAGATAATACTCAATTAGAAAATTGGTA
CAACAAATATGGTGCAGATGATGTAAATATAATAACCCAAAATTTGAATAATAAAGAATTTCCTATGACTAAAGATGAAA
ATGATATTTGGAAAACTGATTTTCAATTAGATATTAATGAAGTTATAGATAATATTGAATTAGTTGATACAGATGAGAAT
AATAAATCTATTAAATACAATTGTAATGATTATAAAATACTAGATTTATGTGATGATCAATTTAAGTTAACAATGTGTAA
AACTAAATAA

Upstream 100 bases:

>100_bases
AATTAAAAAATTTAATAATGGTAAATTTGAAGTGTTAATGAAAGAATAAAATATTCATTTTAAATAAAATAATTTTAAAG
TTTAGATTGGAAGTGATTAT

Downstream 100 bases:

>100_bases
AGATAAATTAGATGACCATAATAGGTCTTTTTTATTGCAAAAAATTAGAGCATAGATATTATTTCTATTGCTCTAATTTT
TTTGTAATATAAGAAAGACT

Product: cell adhesion domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKKWSNDLTDSLKQENFTSSRFHTGRYHYIPYLAFDNHTASTVYDGFQLHYPNNMDWLKIDLINPVNPSKITIQGNDDQP
YLPKKIRVLMSDNDIDYIEIDIIDNIKNDNKVTEYVYKNSTKKYRFLKIEFLEFYSTEWLSINQMQFFEAINVNKYLINQ
NENYYSTNSNFLNLGQPIDNTQLENWYNKYGADDVNIITQNLNNKEFPMTKDENDIWKTDFQLDINEVIDNIELVDTDEN
NKSIKYNCNDYKILDLCDDQFKLTMCKTK

Sequences:

>Translated_269_residues
MKKWSNDLTDSLKQENFTSSRFHTGRYHYIPYLAFDNHTASTVYDGFQLHYPNNMDWLKIDLINPVNPSKITIQGNDDQP
YLPKKIRVLMSDNDIDYIEIDIIDNIKNDNKVTEYVYKNSTKKYRFLKIEFLEFYSTEWLSINQMQFFEAINVNKYLINQ
NENYYSTNSNFLNLGQPIDNTQLENWYNKYGADDVNIITQNLNNKEFPMTKDENDIWKTDFQLDINEVIDNIELVDTDEN
NKSIKYNCNDYKILDLCDDQFKLTMCKTK
>Mature_269_residues
MKKWSNDLTDSLKQENFTSSRFHTGRYHYIPYLAFDNHTASTVYDGFQLHYPNNMDWLKIDLINPVNPSKITIQGNDDQP
YLPKKIRVLMSDNDIDYIEIDIIDNIKNDNKVTEYVYKNSTKKYRFLKIEFLEFYSTEWLSINQMQFFEAINVNKYLINQ
NENYYSTNSNFLNLGQPIDNTQLENWYNKYGADDVNIITQNLNNKEFPMTKDENDIWKTDFQLDINEVIDNIELVDTDEN
NKSIKYNCNDYKILDLCDDQFKLTMCKTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32116; Mature: 32116

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWSNDLTDSLKQENFTSSRFHTGRYHYIPYLAFDNHTASTVYDGFQLHYPNNMDWLKI
CCCCCHHHHHHHHHCCCCCCCEECCEEEEEEEEEECCCCCCEEECCEEEECCCCCCEEEE
DLINPVNPSKITIQGNDDQPYLPKKIRVLMSDNDIDYIEIDIIDNIKNDNKVTEYVYKNS
EEECCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCEEEEEECCC
TKKYRFLKIEFLEFYSTEWLSINQMQFFEAINVNKYLINQNENYYSTNSNFLNLGQPIDN
CCEEEEEEEEEEECCCCCCEEECHHHEEHHCCCEEEEEECCCCEEECCCCEEECCCCCCC
TQLENWYNKYGADDVNIITQNLNNKEFPMTKDENDIWKTDFQLDINEVIDNIELVDTDEN
CHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEHHHHHCCCEEEECCCC
NKSIKYNCNDYKILDLCDDQFKLTMCKTK
CCEEEEECCCEEEEEECCCCEEEEEEECC
>Mature Secondary Structure
MKKWSNDLTDSLKQENFTSSRFHTGRYHYIPYLAFDNHTASTVYDGFQLHYPNNMDWLKI
CCCCCHHHHHHHHHCCCCCCCEECCEEEEEEEEEECCCCCCEEECCEEEECCCCCCEEEE
DLINPVNPSKITIQGNDDQPYLPKKIRVLMSDNDIDYIEIDIIDNIKNDNKVTEYVYKNS
EEECCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCEEEEEECCC
TKKYRFLKIEFLEFYSTEWLSINQMQFFEAINVNKYLINQNENYYSTNSNFLNLGQPIDN
CCEEEEEEEEEEECCCCCCEEECHHHEEHHCCCEEEEEECCCCEEECCCCEEECCCCCCC
TQLENWYNKYGADDVNIITQNLNNKEFPMTKDENDIWKTDFQLDINEVIDNIELVDTDEN
CHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEHHHHHCCCEEEECCCC
NKSIKYNCNDYKILDLCDDQFKLTMCKTK
CCEEEEECCCEEEEEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA